Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 1.2e-132 476.5 242 100.0
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 1.1e-117 426.8 242 89.7
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 3.7e-113 411.8 241 86.7
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 2.4e-112 409.1 241 85.9
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 9.2e-112 407.1 242 86.4
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 8.0e-108 394.0 242 83.1
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.4e-104 383.3 237 81.4
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 3.2e-104 382.1 241 80.1
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 7.1e-104 380.9 237 81.0
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 7.1e-104 380.9 242 80.2
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 7.1e-104 380.9 242 79.8
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 1.6e-103 379.8 242 78.5
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 2.1e-103 379.4 242 79.8
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 2.1e-103 379.4 236 80.9
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 2.7e-103 379.0 242 78.9
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 3.5e-103 378.6 238 79.8
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 1.0e-102 377.1 238 79.8
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 1.0e-102 377.1 238 77.7
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 2.3e-102 375.9 237 80.2
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 2.3e-102 375.9 237 80.2
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 2.3e-102 375.9 195 99.0
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 2.3e-102 375.9 236 81.4
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 3.9e-102 375.2 236 80.9
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 1.1e-101 373.6 238 79.4
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 1.5e-101 373.2 236 78.4
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 1.5e-101 373.2 235 80.9
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 1.5e-101 373.2 236 80.1
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 1.5e-101 373.2 238 76.9
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 3.3e-101 372.1 236 77.5
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 4.3e-101 371.7 232 78.4
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 4.3e-101 371.7 240 77.5
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 4.3e-101 371.7 236 78.8
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 9.5e-101 370.5 236 77.1
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 9.5e-101 370.5 237 79.7
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 3.6e-100 368.6 242 76.9
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 4.7e-100 368.2 244 77.5
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 4.7e-100 368.2 237 78.5
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 4.7e-100 368.2 239 79.1
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 4.7e-100 368.2 236 78.8
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 6.2e-100 367.9 236 79.7
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 1.4e-99 366.7 250 76.0
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 1.8e-99 366.3 242 75.2
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 1.8e-99 366.3 235 76.2
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 3.1e-99 365.5 238 75.6
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 4.0e-99 365.2 235 78.7
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 5.2e-99 364.8 238 75.2
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 5.2e-99 364.8 235 75.7
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 5.2e-99 364.8 242 76.9
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 6.8e-99 364.4 237 76.4
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 8.9e-99 364.0 242 76.9
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 1.2e-98 363.6 238 74.4
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 1.2e-98 363.6 238 74.4
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 1.2e-98 363.6 238 74.4
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 1.5e-98 363.2 236 78.0
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 4.4e-98 361.7 242 75.6
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 7.6e-98 360.9 272 71.0
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 9.9e-98 360.5 242 76.0
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 1.3e-97 360.1 220 82.7
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 1.1e-96 357.1 242 74.0
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 2.4e-96 355.9 264 71.6
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 3.2e-96 355.5 242 74.0
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 3.2e-96 355.5 242 73.6
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 1.2e-95 353.6 237 76.8
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.2e-95 353.6 237 73.8
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 1.2e-95 353.6 237 73.8
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 2.1e-95 352.8 237 73.8
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 6.0e-95 351.3 246 72.0
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 1.0e-94 350.5 265 70.9
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 3.0e-94 349.0 220 78.2
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 3.9e-94 348.6 241 71.8
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 1.1e-93 347.1 236 73.7
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 1.5e-93 346.7 232 74.1
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 5.6e-93 344.7 234 75.6
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 5.6e-93 344.7 243 73.7
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 5.6e-93 344.7 241 72.6
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 5.6e-93 344.7 241 72.6
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 2.8e-92 342.4 240 70.4
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 6.2e-92 341.3 241 70.1
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.8e-91 339.7 233 72.1
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 9.9e-90 334.0 203 82.3
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 2.9e-89 332.4 204 81.9
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 2.9e-89 332.4 236 73.7
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.2e-87 327.0 256 66.0
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 5.6e-85 318.2 242 66.1
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 1.3e-84 317.0 277 62.5
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 1.6e-84 316.6 242 66.5
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 4.8e-84 315.1 242 66.1
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 2.4e-83 312.8 237 68.8
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.1e-80 303.9 264 61.0
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 3.5e-79 298.9 273 58.6
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.1e-77 293.9 278 60.4
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 4.3e-77 292.0 228 66.2
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 7.3e-77 291.2 237 61.2
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 1.4e-75 287.0 243 67.1
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 3.1e-75 285.8 212 69.8
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 4.0e-75 285.4 222 63.1
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 4.5e-74 282.0 161 84.5
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 5.8e-74 281.6 195 71.8
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 1.3e-70 270.4 191 70.7
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 8.7e-70 267.7 307 50.5
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 1.6e-68 263.5 243 55.1
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 5.5e-64 248.4 196 68.4
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 2.1e-63 246.5 154 74.7
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 7.9e-63 244.6 220 55.9
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 7.4e-61 238.0 225 52.4
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 1.6e-60 236.9 180 67.8
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 2.6e-58 229.6 147 76.2
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 2.6e-58 229.6 180 65.6
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 2.6e-58 229.6 180 65.6
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 1.1e-56 224.2 221 52.5
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 4.6e-55 218.8 196 62.8
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 6.1e-47 191.8 122 82.0
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 1.1e-40 171.0 123 74.8
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 9.4e-40 167.9 128 68.0
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 9.4e-32 141.4 163 49.7
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 3.3e-29 132.9 90 73.3
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 5.7e-29 132.1 69 89.9
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 2.0e-26 123.6 61 96.7
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.7e-26 123.2 93 73.1
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 2.2e-25 120.2 71 77.5
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 6.3e-20 102.1 55 80.0
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 1.0e-17 94.7 103 56.3
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 8.0e-15 85.1 163 32.5
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 4.9e-12 75.9 70 65.7
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 1.6e-10 70.9 65 55.4


User provided reference genes

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