Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g001630 Solanum pennellii HOM05D003753 ORTHO05D020903 1.1e-75 286.6 147 100.0
PGSC0003DMG400025556 Solanum tuberosum HOM05D003753 ORTHO05D005081 7.3e-11 71.2 46 76.1
Nitab4.5_0005634g0050 Nicotiana tabacum HOM05D003753 ORTHO05D005081 3.6e-10 68.9 43 79.1
Nitab4.5_0011030g0020 Nicotiana tabacum HOM05D003753 ORTHO05D005081 3.6e-10 68.9 43 79.1
CDE08G0675 Ceratophyllum demersum HOM05D003753 ORTHO05D005081 4.7e-10 68.6 50 70.0
Peaxi162Scf00083g00426 Petunia axillaris HOM05D003753 ORTHO05D005081 4.7e-10 68.6 43 79.1
CAN.G732.16 Capsicum annuum HOM05D003753 ORTHO05D005081 6.1e-10 68.2 43 79.1
Solyc05g014090.3 Solanum lycopersicum HOM05D003753 ORTHO05D005081 1.0e-09 67.4 43 79.1
Solyc05g025630.3 Solanum lycopersicum HOM05D003753 ORTHO05D005081 1.0e-09 67.4 43 79.1
Sopen05g009090 Solanum pennellii HOM05D003753 ORTHO05D005081 1.0e-09 67.4 43 79.1
Sopen05g009100 Solanum pennellii HOM05D003753 ORTHO05D005081 1.0e-09 67.4 43 79.1
Sopen05g016940 Solanum pennellii HOM05D003753 ORTHO05D005081 1.0e-09 67.4 43 79.1
CDE06G0756 Ceratophyllum demersum HOM05D003753 ORTHO05D005081 2.3e-09 66.2 50 66.0
MBI06_g13419_MAGBIO Magnolia biondii HOM05D003753 ORTHO05D005081 3.1e-09 65.9 40 82.5
Oeu018239.1 Olea europaea HOM05D003753 ORTHO05D005081 5.2e-09 65.1 40 80.0
PGSC0003DMG400034987 Solanum tuberosum HOM05D019526 ORTHO05D020903 5.2e-09 65.1 37 89.2
MSTRG.18971 Avicennia marina HOM05D003753 ORTHO05D005081 6.8e-09 64.7 40 77.5
Lj7A675G38 Lonicera japonica HOM05D003753 ORTHO05D005081 6.8e-09 64.7 36 86.1
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 8.9e-09 64.3 40 77.5
Migut.J00089 Erythranthe guttata HOM05D003753 ORTHO05D005081 8.9e-09 64.3 40 80.0
Potri.005G074400 Populus trichocarpa HOM05D003753 ORTHO05D005081 8.9e-09 64.3 40 80.0
Potri.007G094000 Populus trichocarpa HOM05D003753 ORTHO05D005081 8.9e-09 64.3 40 80.0
Sabra07G0077800 Salix brachista HOM05D003753 ORTHO05D005081 8.9e-09 64.3 40 80.0
CSS0033183 Camellia sinensis var. sinensis HOM05D003753 ORTHO05D005081 1.2e-08 63.9 40 77.5
Dinv36761 Davidia involucrata HOM05D003753 ORTHO05D005081 1.2e-08 63.9 40 77.5
Hma1.2p1_0798F.1_g219790 Hydrangea macrophylla HOM05D003753 ORTHO05D005081 1.2e-08 63.9 40 77.5
BcaC06g36597 Brassica carinata HOM05D003753 ORTHO05D005081 1.5e-08 63.5 48 66.7
C07p02380 Brassica napus HOM05D003753 ORTHO05D005081 1.5e-08 63.5 48 66.7
BolC7t40644H Brassica oleracea HOM05D003753 ORTHO05D005081 1.5e-08 63.5 48 66.7
Cpa.g.sc83.92 Carica papaya HOM05D003753 ORTHO05D005081 2.0e-08 63.2 40 77.5
ECA236G2053 Erigeron canadensis HOM05D003753 ORTHO05D005081 2.0e-08 63.2 40 77.5
HanXRQChr06g0178531 Helianthus annuus HOM05D003753 ORTHO05D005081 2.0e-08 63.2 40 77.5
HanXRQChr11g0321581 Helianthus annuus HOM05D003753 ORTHO05D005081 2.0e-08 63.2 40 77.5
Prupe.7G211000 Prunus persica HOM05D003753 ORTHO05D005081 2.0e-08 63.2 40 80.0
Atru.chr7.1580 Acer truncatum HOM05D003753 ORTHO05D005081 2.6e-08 62.8 40 77.5
Dinv42315 Davidia involucrata HOM05D003753 ORTHO05D005081 2.6e-08 62.8 40 75.0
Sabra05G0061300 Salix brachista HOM05D003753 ORTHO05D005081 2.6e-08 62.8 40 77.5
CARHR109970 Cardamine hirsuta HOM05D003753 ORTHO05D005081 3.4e-08 62.4 36 83.3
FAN23G0946 Fragaria x ananassa HOM05D003753 ORTHO05D005081 3.4e-08 62.4 40 77.5
Lsat_1_v5_gn_2_117981 Lactuca sativa HOM05D003753 ORTHO05D005081 4.4e-08 62.0 40 75.0
CANSAT56G3520 Cannabis sativa HOM05D003753 ORTHO05D005081 5.8e-08 61.6 40 75.0
unitig_699.g19554 Utricularia gibba HOM05D003753 ORTHO05D005081 5.8e-08 61.6 47 63.8
Aa31LG8G16560 Aethionema arabicum HOM05D003753 ORTHO05D005081 7.5e-08 61.2 36 80.6
Eucgr.C03892 Eucalyptus grandis HOM05D003753 ORTHO05D005081 7.5e-08 61.2 44 72.7
HPP92_012451 Vanilla planifolia HOM05D003753 ORTHO05D005081 7.5e-08 61.2 40 75.0
PSO541G3309 Papaver somniferum HOM05D003753 ORTHO05D005081 9.8e-08 60.8 46 63.0
Carub.0003s3383 Capsella rubella HOM05D003753 ORTHO05D005081 1.3e-07 60.5 36 80.6
MD02G1077800 Malus domestica HOM05D003753 ORTHO05D005081 1.3e-07 60.5 36 80.6
MD15G1206400 Malus domestica HOM05D003753 ORTHO05D005081 1.3e-07 60.5 36 80.6
Manes.08G173100 Manihot esculenta HOM05D003753 ORTHO05D005081 1.3e-07 60.5 44 65.9
SGA_v2.0_scaffold75G25039 Striga asiatica HOM05D003753 ORTHO05D005081 2.2e-07 59.7 36 77.8
Zm00001eb163470 Zea mays HOM05D003753 ORTHO05D005081 2.9e-07 59.3 34 82.4
Zm00001eb354080 Zea mays HOM05D003753 ORTHO05D005081 2.9e-07 59.3 34 82.4
RcHm_v2.0_Chr2g0093231 Rosa chinensis HOM05D003753 ORTHO05D005081 3.7e-07 58.9 34 82.4
TAR624G1221 Trochodendron aralioides HOM05D003753 ORTHO05D005081 3.7e-07 58.9 40 67.5
CSS0046684 Camellia sinensis var. sinensis HOM05D003753 ORTHO05D005081 4.9e-07 58.5 32 81.2
Ah.13g077350 Amaranthus hybridus HOM05D003753 ORTHO05D005081 6.4e-07 58.2 34 82.4
CSS0005601 Camellia sinensis var. sinensis HOM05D003753 ORTHO05D005081 6.4e-07 58.2 36 72.2
AT2G19540 Arabidopsis thaliana HOM05D003753 ORTHO05D005081 8.3e-07 57.8 36 77.8
EL10Ac8g19226 Beta vulgaris HOM05D003753 ORTHO05D005081 1.9e-06 56.6 40 67.5
AUR62027495 Chenopodium quinoa HOM05D003753 ORTHO05D005081 1.9e-06 56.6 48 54.2
ClCG03G015660 Citrullus lanatus HOM05D003753 ORTHO05D005081 1.9e-06 56.6 31 83.9
Os11g0134500 Oryza sativa ssp. japonica HOM05D003753 ORTHO05D005081 1.9e-06 56.6 40 67.5
Os12g0132400 Oryza sativa ssp. japonica HOM05D003753 ORTHO05D005081 1.9e-06 56.6 40 67.5
AUR62033985 Chenopodium quinoa HOM05D003753 ORTHO05D005081 2.4e-06 56.2 48 54.2
FAN19G2460 Fragaria x ananassa HOM05D003753 ORTHO05D005081 2.4e-06 56.2 31 83.9
Lj4g0004391 Lotus japonicus HOM05D003753 ORTHO05D005081 3.2e-06 55.8 41 75.6
Medtr5g024090 Medicago truncatula HOM05D003753 ORTHO05D005081 3.2e-06 55.8 50 60.0
SHI20703 Sapria himalayana HOM05D003753 ORTHO05D005081 5.4e-06 55.1 40 67.5
SGA_v2.0_scaffold85G26676 Striga asiatica HOM05D000860 ORTHO05D003230 7.0e-06 54.7 34 76.5


User provided reference genes

Program Settings