Gene: AT2G19540

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G19540
  • Transcript Identifier AT2G19540.1
  • Gene Type Coding gene
  • Location Chr2 : 8461804-8464347 : positive

Gene Family Information

  • ID HOM05D003753
  • #Genes/#Species 183/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G19540.1
  • Alias HTD1,heat stress tolerant DWD 1
  • uniprot Q9ZUN8

Descriptions

  • Description Transducin family protein / WD-40 repeat family protein
  • Computational description Transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: Histone-binding protein RBBP4 (InterPro:IPR022052), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT2G16780.1); Has 21764 Blast hits to 15460 proteins in 558 species: Archae - 2; Bacteria - 1508; Metazoa - 8621; Fungi - 5109; Plants - 3695; Viruses - 0; Other Eukaryotes - 2829 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
Gene Ontologyprotein ubiquitination
GO:0009408
IEP
Gene Ontologyresponse to heat1
GO:1900035
IMP
Gene Ontologynegative regulation of cellular response to heat1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0080008
ISS
Gene OntologyCul4-RING E3 ubiquitin ligase complex2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022052 Histone-binding protein RBBP4, N-terminal
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR036322 WD40-repeat-containing domain superfamily
IPR001680 WD40 repeat
Mapman id Description
35.1 not assigned.annotated