Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 3.8e-151 538.1 266 100.0
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 3.9e-148 528.1 266 98.1
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 2.5e-147 525.4 266 97.7
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 1.4e-134 483.0 266 89.5
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 7.9e-133 477.2 264 90.5
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 5.5e-126 454.5 334 71.3
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 4.7e-117 424.9 226 92.0
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 6.3e-114 414.5 246 81.3
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 3.8e-111 405.2 249 79.5
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 1.5e-110 403.3 249 78.7
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 7.2e-110 401.0 250 78.0
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 1.6e-109 399.8 247 78.5
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 1.6e-109 399.8 247 78.1
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 4.7e-109 398.3 247 78.5
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 1.8e-108 396.4 249 79.1
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 2.3e-108 396.0 244 78.7
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 5.2e-108 394.8 247 76.1
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 6.8e-108 394.4 248 77.0
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 6.8e-108 394.4 250 76.4
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 6.8e-108 394.4 251 76.1
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 7.5e-107 391.0 251 75.3
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 2.8e-106 389.0 247 76.1
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 6.3e-106 387.9 244 77.9
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 8.3e-106 387.5 229 81.2
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 1.4e-105 386.7 249 75.5
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 1.2e-104 383.6 247 75.3
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 1.6e-104 383.3 253 74.3
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 1.6e-104 383.3 255 72.5
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 2.7e-104 382.5 249 76.3
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 5.9e-104 381.3 252 73.8
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 5.9e-104 381.3 246 76.0
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 7.8e-104 380.9 246 77.2
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 1.0e-103 380.6 230 78.7
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.0e-103 380.6 246 77.2
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 1.3e-103 380.2 249 74.3
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 2.3e-103 379.4 249 75.9
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 1.1e-102 377.1 252 73.4
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 1.5e-102 376.7 254 72.8
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 1.9e-102 376.3 258 73.6
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 4.3e-102 375.2 237 75.9
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 4.3e-102 375.2 257 72.4
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 4.3e-102 375.2 231 77.9
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 9.5e-102 374.0 249 73.5
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 1.2e-101 373.6 254 72.0
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 1.2e-101 373.6 254 72.0
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 1.2e-101 373.6 257 72.0
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 1.6e-101 373.2 246 71.5
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 2.1e-101 372.9 250 73.6
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 8.0e-101 370.9 253 71.9
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 1.0e-100 370.5 251 72.5
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 1.4e-100 370.2 228 76.8
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 2.3e-100 369.4 255 71.8
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 3.0e-100 369.0 252 70.2
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 4.0e-100 368.6 244 73.0
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 4.0e-100 368.6 273 68.9
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 5.2e-100 368.2 249 72.7
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 1.2e-99 367.1 250 71.6
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 1.5e-99 366.7 244 74.2
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 2.6e-99 365.9 250 71.6
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 4.4e-99 365.2 234 76.5
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 4.4e-99 365.2 236 75.0
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 5.7e-99 364.8 235 73.6
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 7.5e-99 364.4 239 73.6
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 8.3e-98 360.9 245 73.1
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 8.3e-98 360.9 274 66.8
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 1.4e-97 360.1 252 69.8
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 2.4e-97 359.4 228 76.3
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 4.1e-97 358.6 239 72.8
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 5.4e-97 358.2 238 72.3
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 5.4e-97 358.2 259 68.7
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 9.2e-97 357.5 254 69.7
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 1.2e-96 357.1 257 69.6
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.6e-96 356.7 248 71.0
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 2.7e-96 355.9 238 73.1
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 2.7e-96 355.9 219 79.5
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 4.6e-96 355.1 240 71.2
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 4.6e-96 355.1 258 68.6
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 4.6e-96 355.1 256 69.5
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 1.7e-95 353.2 245 69.4
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 5.0e-95 351.7 229 72.1
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 6.6e-95 351.3 241 71.4
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 6.6e-95 351.3 241 71.4
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.1e-94 350.5 209 81.3
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 1.1e-94 350.5 208 81.7
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 1.1e-94 350.5 266 65.8
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 1.1e-94 350.5 267 66.3
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 5.6e-94 348.2 247 72.1
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 7.3e-94 347.8 208 79.8
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 1.2e-93 347.1 323 58.2
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 1.1e-92 344.0 249 71.5
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 1.4e-92 343.6 230 73.5
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 8.9e-92 340.9 236 69.9
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 1.5e-91 340.1 235 70.2
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 5.8e-91 338.2 248 66.5
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 6.4e-90 334.7 212 77.4
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 1.6e-88 330.1 208 76.9
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 3.0e-87 325.9 211 73.9
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 1.2e-85 320.5 199 78.9
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 8.9e-84 314.3 216 69.4
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.4e-81 307.0 198 73.7
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 3.6e-77 292.4 197 71.1
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 1.9e-73 280.0 306 51.3
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 5.1e-71 271.9 166 81.3
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 7.3e-70 268.1 223 61.0
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 2.0e-67 260.0 174 73.6
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 4.4e-67 258.8 230 53.9
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 1.6e-61 240.4 240 50.8
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 1.2e-59 234.2 224 52.7
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 1.4e-57 227.3 156 69.9
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 1.4e-52 210.7 229 49.3
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 2.0e-51 206.8 133 73.7
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 4.3e-46 189.1 116 75.9
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 3.1e-44 183.0 143 65.0
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 4.0e-44 182.6 143 65.0
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 6.9e-44 181.8 135 65.9
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 1.5e-43 180.6 143 64.3
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 1.9e-41 173.7 114 72.8
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 1.3e-37 161.0 172 49.4
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 2.2e-37 160.2 96 80.2
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 1.7e-34 150.6 121 61.2
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 6.7e-31 138.7 79 79.7
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 1.1e-30 137.9 95 71.6
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 2.9e-26 123.2 84 65.5
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 5.1e-23 112.5 111 57.7
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 2.5e-17 93.6 47 83.0
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 1.6e-16 90.9 193 30.6
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 1.3e-10 71.2 111 41.4
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 1.1e-09 68.2 111 40.5
Gohir.A03G127900 Gossypium hirsutum HOM05D005955 ORTHO05D033925 2.0e-06 57.4 39 69.2


User provided reference genes

Program Settings