Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 2.2e-244 848.6 439 100.0
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 5.0e-241 837.4 439 98.6
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 2.2e-236 822.0 439 96.4
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 2.3e-209 732.3 445 87.4
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 3.1e-206 721.8 445 85.2
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 2.2e-204 715.7 451 83.6
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 1.6e-194 682.9 453 80.6
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 1.8e-142 510.0 438 62.3
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 7.7e-141 504.6 372 71.0
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 1.1e-136 490.7 424 64.4
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 2.6e-136 489.6 383 68.1
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 1.3e-135 487.3 373 67.8
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 8.2e-135 484.6 411 64.5
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 1.8e-134 483.4 374 67.6
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 7.0e-134 481.5 369 68.8
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 1.5e-133 480.3 344 71.5
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 4.5e-133 478.8 369 68.3
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 7.7e-133 478.0 376 68.4
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 7.7e-133 478.0 443 58.5
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 1.7e-132 476.9 369 68.3
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 6.5e-132 474.9 450 59.1
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 8.5e-132 474.6 374 67.4
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 9.4e-131 471.1 376 65.2
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 1.6e-130 470.3 378 65.6
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 6.1e-130 468.4 382 64.1
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 1.0e-129 467.6 379 64.4
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 2.3e-129 466.5 380 63.4
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 1.1e-128 464.2 425 60.5
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 2.6e-128 463.0 432 60.9
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 9.7e-128 461.1 417 60.2
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 9.7e-128 461.1 372 65.3
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 2.2e-127 459.9 344 69.5
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 8.2e-127 458.0 376 63.0
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 1.4e-126 457.2 402 61.7
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 1.4e-126 457.2 398 61.8
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 5.3e-126 455.3 371 64.4
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 1.2e-125 454.1 436 58.3
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 2.6e-125 453.0 426 59.2
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 3.5e-125 452.6 412 60.4
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 3.5e-125 452.6 480 54.4
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 4.5e-125 452.2 372 64.0
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 5.9e-125 451.8 434 58.5
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 1.7e-124 450.3 356 64.9
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 1.9e-123 446.8 373 60.9
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 9.4e-123 444.5 437 56.5
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 4.7e-122 442.2 380 63.4
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 8.0e-122 441.4 445 57.1
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 8.0e-122 441.4 425 58.1
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 1.4e-121 440.7 433 58.0
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 3.0e-121 439.5 331 67.4
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 3.0e-121 439.5 439 56.7
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 6.8e-121 438.3 380 62.1
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 1.5e-120 437.2 388 60.6
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 2.0e-120 436.8 362 65.7
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 2.6e-120 436.4 345 67.0
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 7.5e-120 434.9 349 65.9
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 6.3e-119 431.8 384 61.7
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 6.3e-119 431.8 412 57.8
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 1.1e-118 431.0 349 64.2
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 4.1e-118 429.1 405 57.8
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 4.1e-118 429.1 443 56.7
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 4.1e-118 429.1 409 57.2
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 1.2e-117 427.6 378 61.9
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.6e-117 427.2 343 66.2
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 2.0e-117 426.8 338 66.0
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 1.7e-116 423.7 354 61.9
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 6.5e-116 421.8 354 62.1
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 8.5e-116 421.4 413 55.7
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 1.9e-115 420.2 383 59.0
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 1.9e-115 420.2 387 59.9
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 4.2e-115 419.1 386 58.0
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 1.6e-114 417.2 386 59.3
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 1.6e-114 417.2 369 59.9
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 8.0e-114 414.8 416 56.2
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 1.8e-113 413.7 377 58.9
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 2.3e-113 413.3 371 60.6
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 3.0e-113 412.9 380 58.2
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 5.2e-113 412.1 370 60.0
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 2.6e-112 409.8 380 58.2
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 3.4e-112 409.5 349 62.5
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 9.8e-112 407.9 375 58.1
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 8.3e-111 404.8 376 58.8
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 2.4e-110 403.3 419 53.2
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 4.1e-110 402.5 378 57.9
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 5.4e-110 402.1 352 60.8
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 7.7e-109 398.3 388 56.7
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 2.9e-108 396.4 352 59.7
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 5.0e-108 395.6 376 57.2
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 5.0e-108 395.6 314 65.9
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 7.2e-107 391.7 354 59.3
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 2.3e-105 386.7 341 58.9
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 5.6e-99 365.5 299 64.2
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 2.0e-93 347.1 381 54.1
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 1.6e-90 337.4 406 50.2
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 2.6e-88 330.1 239 70.7
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 9.8e-88 328.2 406 46.3
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 1.5e-83 314.3 232 71.6
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 1.9e-83 313.9 364 48.6
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 2.3e-81 307.0 269 61.3
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 4.1e-78 296.2 213 72.3
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 1.9e-75 287.3 207 71.5
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 1.4e-65 254.6 210 65.7
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 4.4e-64 249.6 349 43.0
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 7.1e-62 242.3 371 39.1
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 2.7e-61 240.4 368 41.3
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 1.5e-59 234.6 220 55.0
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 8.1e-58 228.8 233 57.5
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 5.3e-57 226.1 353 41.4
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 1.1e-33 148.7 212 44.8
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 2.2e-26 124.4 320 32.5
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 1.2e-24 118.6 91 65.9
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 3.4e-24 117.1 102 58.8
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 1.0e-23 115.5 93 62.4
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 7.0e-17 92.8 100 51.0
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 7.0e-17 92.8 157 43.3
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 4.2e-14 83.6 355 27.3
Actinidia29335 Actinidia chinensis HOM05D006898 ORTHO05D008506 7.2e-14 82.8 122 41.8
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 9.4e-14 82.4 352 26.4
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 3.3e-11 73.9 120 40.8


User provided reference genes

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