Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 2.6e-268 928.3 524 100.0
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 4.5e-265 917.5 524 99.0
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 1.1e-229 800.0 555 82.5
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 1.5e-199 699.9 537 76.4
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 2.6e-167 592.8 540 63.3
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 9.8e-135 484.6 474 63.9
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 2.7e-124 449.9 471 60.1
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 1.1e-122 444.5 503 57.5
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 8.1e-121 438.3 467 59.7
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 8.1e-121 438.3 457 60.2
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 6.4e-118 428.7 559 53.7
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 2.4e-117 426.8 530 53.6
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 5.4e-117 425.6 465 58.1
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 1.2e-116 424.5 533 54.4
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 1.6e-116 424.1 554 48.2
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 1.0e-115 421.4 467 58.5
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 1.7e-115 420.6 545 52.8
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 3.0e-115 419.9 581 49.7
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 1.9e-114 417.2 563 50.1
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 1.2e-113 414.5 446 59.4
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 1.2e-113 414.5 496 54.6
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 1.2e-113 414.5 476 57.6
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 1.6e-113 414.1 519 52.6
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 6.2e-113 412.1 548 52.4
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 8.9e-112 408.3 460 57.2
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 2.6e-111 406.8 460 57.4
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 4.4e-111 406.0 483 55.3
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 1.7e-110 404.1 475 56.4
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 4.9e-110 402.5 516 47.9
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 8.4e-110 401.7 464 56.0
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 1.9e-109 400.6 463 54.6
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 4.1e-109 399.4 561 50.3
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 1.2e-108 397.9 549 51.5
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 1.6e-108 397.5 541 51.4
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 1.6e-108 397.5 491 52.1
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 2.1e-108 397.1 467 55.5
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 4.6e-108 396.0 452 57.5
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 4.6e-108 396.0 449 56.3
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 1.3e-107 394.4 589 49.1
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 3.0e-107 393.3 455 56.7
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 1.1e-106 391.3 458 56.1
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 4.3e-106 389.4 463 54.9
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 5.6e-106 389.0 458 55.7
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 7.3e-106 388.7 552 50.2
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 1.6e-105 387.5 544 48.2
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 3.6e-105 386.3 472 53.2
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 8.1e-105 385.2 469 55.2
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 8.1e-105 385.2 477 55.6
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 8.1e-105 385.2 488 54.3
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 1.2e-103 381.3 501 51.3
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 3.4e-103 379.8 453 57.2
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 9.9e-103 378.3 464 54.1
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 2.2e-102 377.1 546 50.9
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 2.9e-102 376.7 478 53.3
Nitab4.5_0003863g0030 Nicotiana tabacum HOM05D006616 ORTHO05D008435 3.8e-102 376.3 321 67.6
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 3.8e-102 376.3 474 55.5
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 2.4e-101 373.6 476 53.8
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 2.4e-101 373.6 468 54.7
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 2.4e-101 373.6 460 52.8
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 1.7e-99 367.5 457 53.6
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 5.1e-99 365.9 519 50.5
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 1.1e-98 364.8 560 50.0
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.9e-98 364.0 458 55.2
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 3.3e-98 363.2 490 53.3
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 4.3e-98 362.8 451 53.2
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 4.3e-98 362.8 456 52.9
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 8.1e-97 358.6 458 55.0
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 2.6e-95 353.6 486 51.4
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 3.4e-95 353.2 462 53.0
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 7.6e-95 352.1 530 47.2
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 9.9e-95 351.7 535 47.7
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 1.7e-94 350.9 499 49.5
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 1.7e-94 350.9 466 51.5
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 2.9e-94 350.1 463 52.3
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 5.4e-93 345.9 469 52.7
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 2.7e-92 343.6 498 47.4
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 1.8e-91 340.9 459 52.7
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 1.9e-90 337.4 494 49.2
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 9.6e-90 335.1 450 50.9
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 9.6e-90 335.1 483 49.9
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 2.1e-89 334.0 450 50.7
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 2.1e-89 334.0 458 51.7
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 4.8e-89 332.8 463 50.8
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 8.1e-89 332.0 470 52.1
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 2.6e-87 327.0 443 50.6
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 2.2e-86 323.9 445 50.3
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 8.4e-86 322.0 459 51.9
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 2.4e-85 320.5 443 49.9
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 3.0e-83 313.5 459 51.6
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 6.7e-83 312.4 419 53.0
Nitab4.5_0003863g0020 Nicotiana tabacum HOM05D006616 ORTHO05D008435 5.8e-79 299.3 256 66.0
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 1.7e-78 297.7 385 52.7
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 9.3e-77 292.0 477 45.9
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 1.0e-75 288.5 585 41.2
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 5.9e-71 272.7 537 42.5
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 5.9e-71 272.7 537 42.5
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 1.5e-66 258.1 758 34.7
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 8.5e-62 242.3 578 39.1
Hma1.2p1_2178F.1_g316200 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 1.1e-48 198.7 257 49.0
Sc13g0000840 Simmondsia chinensis HOM05D006616 ORTHO05D008435 1.9e-45 188.0 207 51.2
Cpa.g.sc33.190 Carica papaya HOM05D006616 ORTHO05D008435 6.1e-44 183.0 204 50.0
SEGI_28853 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 5.7e-42 176.4 355 44.2
Actinidia25416 Actinidia chinensis HOM05D006616 ORTHO05D008435 9.4e-37 159.1 206 48.1
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 8.8e-35 152.5 260 38.5
SEGI_15760 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 2.0e-34 151.4 125 65.6
CBR_g8767 Chara braunii HOM05D006616 ORTHO05D008435 2.7e-31 141.0 405 36.0
FAN23G2418 Fragaria x ananassa HOM05D006616 ORTHO05D008435 8.6e-30 136.0 79 91.1
COL.COLO4_33517 Corchorus olitorius HOM05D006616 ORTHO05D008435 1.2e-28 132.1 160 48.8
SMO339G0010 Selaginella moellendorffii HOM05D006616 ORTHO05D008435 1.8e-27 128.3 79 79.7
vmacro00862 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 5.7e-26 123.2 110 63.6
Psat1g016240 Pisum sativum HOM05D006616 ORTHO05D008435 1.4e-24 118.6 151 51.7
Psat7g065560 Pisum sativum HOM05D006616 ORTHO05D008435 4.1e-24 117.1 160 49.4
vmacro00863 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 4.3e-21 107.1 86 64.0
SHI24850 Sapria himalayana HOM05D006616 ORTHO05D008435 2.9e-17 94.4 164 36.6
Actinidia29490 Actinidia chinensis HOM05D006616 ORTHO05D008435 1.2e-15 89.0 82 56.1
MCO09G511 Micromonas commoda HOM05D006616 ORTHO05D008435 7.8e-15 86.3 336 37.8
PSO478G1191 Papaver somniferum HOM05D006616 ORTHO05D008435 4.0e-11 73.9 170 40.0
MBI16_g47221_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 2.6e-10 71.2 161 35.4
BcaC02g07966 Brassica carinata HOM05D001681 ORTHO05D001589 1.3e-09 68.9 50 72.0
Cre12.g527600 Chlamydomonas reinhardtii HOM05D006616 ORTHO05D008435 1.7e-09 68.6 47 66.0
Migut.C01363 Erythranthe guttata HOM05D006616 ORTHO05D008435 1.4e-08 65.5 169 33.1


User provided reference genes

Program Settings