Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g014780 Solanum pennellii HOM05D055428 ORTHO05D000007 2.9e-219 765.0 407 100.0
PGSC0003DMG400036761 Solanum tuberosum HOM05D000024 ORTHO05D000007 2.1e-31 141.0 128 56.2
PGSC0003DMG400034636 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.5e-29 134.8 194 42.3
PGSC0003DMG400044928 Solanum tuberosum HOM05D000024 ORTHO05D000007 3.3e-29 133.7 147 48.3
PGSC0003DMG400041338 Solanum tuberosum HOM05D000024 ORTHO05D000007 5.6e-29 132.9 160 45.6
Sopen02g009750 Solanum pennellii HOM05D000003 ORTHO05D026164 1.3e-28 131.7 98 58.2
PGSC0003DMG400041868 Solanum tuberosum HOM05D000024 ORTHO05D000007 7.6e-26 122.5 160 43.1
PGSC0003DMG400042088 Solanum tuberosum HOM05D000024 ORTHO05D011127 1.6e-23 114.8 155 42.6
PGSC0003DMG400034828 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.1e-21 108.6 97 50.5
Sopen11g007970 Solanum pennellii HOM05D000014 ORTHO05D000016 4.3e-21 106.7 82 56.1
Sopen09g015050 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-20 105.1 76 60.5
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 4.8e-20 103.2 149 36.9
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 4.8e-20 103.2 132 38.6
PGSC0003DMG400044753 Solanum tuberosum HOM05D000024 ORTHO05D000007 6.2e-20 102.8 188 33.5
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 8.1e-20 102.4 150 37.3
Sopen05g017810 Solanum pennellii HOM05D020245 ORTHO05D000007 1.4e-19 101.7 80 55.0
Sopen06g013950 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-19 101.7 108 43.5
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 3.1e-19 100.5 159 35.2
Sopen11g007870 Solanum pennellii HOM05D000155 ORTHO05D000007 6.9e-19 99.4 163 34.4
Sopen06g013970 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-18 98.6 130 39.2
Sopen00g003400 Solanum pennellii HOM05D000024 ORTHO05D000007 4.5e-18 96.7 146 35.6
Sopen00g009370 Solanum pennellii HOM05D000024 ORTHO05D000006 4.5e-18 96.7 148 35.1
Sopen00g007260 Solanum pennellii HOM05D000003 ORTHO05D000004 7.6e-18 95.9 148 34.5
Sopen11g002790 Solanum pennellii HOM05D000024 ORTHO05D000007 1.0e-17 95.5 147 33.3
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-17 94.7 90 44.4
Sopen08g013110 Solanum pennellii HOM05D000024 ORTHO05D000007 1.7e-17 94.7 98 43.9
Sopen08g017350 Solanum pennellii HOM05D000047 ORTHO05D000589 1.7e-17 94.7 144 36.1
PGSC0003DMG400029909 Solanum tuberosum HOM05D000024 ORTHO05D000022 2.2e-17 94.4 89 43.8
PGSC0003DMG400043914 Solanum tuberosum HOM05D008663 ORTHO05D017125 2.2e-17 94.4 164 32.9
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 2.9e-17 94.0 149 33.6
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 6.5e-17 92.8 111 36.9
Sopen04g015570 Solanum pennellii HOM05D000024 ORTHO05D000007 1.4e-16 91.7 135 36.3
Sopen09g030960 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-16 91.3 148 37.8
Sopen11g007960 Solanum pennellii HOM05D008562 ORTHO05D011465 5.5e-16 89.7 66 59.1
Sopen11g018190 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-15 88.6 100 41.0
PGSC0003DMG400036258 Solanum tuberosum HOM05D012066 ORTHO05D017133 2.1e-15 87.8 186 31.7
PGSC0003DMG400038794 Solanum tuberosum HOM05D000024 ORTHO05D000007 4.6e-15 86.7 108 42.6
Sopen03g013510 Solanum pennellii HOM05D000014 ORTHO05D000016 5.1e-14 83.2 76 47.4
PGSC0003DMG400043899 Solanum tuberosum HOM05D010285 ORTHO05D011400 5.1e-14 83.2 167 31.7
PGSC0003DMG400047130 Solanum tuberosum HOM05D000024 ORTHO05D000007 5.1e-14 83.2 144 32.6
Sopen05g017790 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-12 78.6 269 30.5
Sopen07g013580 Solanum pennellii HOM05D000024 ORTHO05D000007 1.3e-12 78.6 97 39.2
Sopen07g013730 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-12 78.2 139 30.9
Peaxi162Scf00700g00051 Petunia axillaris HOM05D000070 ORTHO05D002524 1.5e-10 71.6 151 29.1
Sopen05g020310 Solanum pennellii HOM05D008966 ORTHO05D011127 3.4e-10 70.5 156 30.1
Sopen04g019580 Solanum pennellii HOM05D040192 ORTHO05D037681 4.5e-10 70.1 130 36.2
PGSC0003DMG400034645 Solanum tuberosum HOM05D000024 ORTHO05D000007 5.8e-10 69.7 122 34.4
CAN.G1139.21 Capsicum annuum HOM05D000024 ORTHO05D000007 1.0e-09 68.9 126 29.4
Sopen09g015020 Solanum pennellii HOM05D000024 ORTHO05D000007 1.0e-09 68.9 258 26.4
Sopen07g013630 Solanum pennellii HOM05D000003 ORTHO05D000007 2.2e-09 67.8 107 36.4
Nitab4.5_0000099g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.8e-09 67.0 115 33.0
Nitab4.5_0014470g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.8e-09 67.0 156 32.7
Sopen04g008890 Solanum pennellii HOM05D015646 ORTHO05D017131 3.8e-09 67.0 126 30.2
Sopen01g019410 Solanum pennellii HOM05D000003 ORTHO05D000006 8.4e-09 65.9 62 43.5
Nitab4.5_0004401g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-08 64.3 89 38.2
Nitab4.5_0000261g0210 Nicotiana tabacum HOM05D000801 ORTHO05D000007 3.2e-08 63.9 97 33.0
Nitab4.5_0007752g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.2e-08 63.5 127 30.7
Sopen09g018560 Solanum pennellii HOM05D008966 ORTHO05D023159 4.2e-08 63.5 48 58.3
Sopen11g013340 Solanum pennellii HOM05D000024 ORTHO05D000007 7.1e-08 62.8 57 45.6
Nitab4.5_0001423g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-07 62.0 83 36.1
SHI37945 Sapria himalayana HOM05D000024 ORTHO05D000007 1.6e-07 61.6 95 29.5
SHI41931 Sapria himalayana HOM05D000024 ORTHO05D000007 1.6e-07 61.6 120 30.8
SHI41974 Sapria himalayana HOM05D000024 ORTHO05D000007 1.6e-07 61.6 120 30.8
Nitab4.5_0006025g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-07 61.2 147 26.5
Sopen11g007850 Solanum pennellii HOM05D000155 ORTHO05D000022 2.1e-07 61.2 63 54.0
Nitab4.5_0009190g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-07 60.8 102 31.4
Nitab4.5_0012845g0020 Nicotiana tabacum HOM05D000801 ORTHO05D000007 2.7e-07 60.8 81 34.6
Nitab4.5_0000512g0070 Nicotiana tabacum HOM05D011660 ORTHO05D000007 3.5e-07 60.5 147 31.3
Solyc10g044950.1 Solanum lycopersicum HOM05D055428 ORTHO05D000007 3.5e-07 60.5 31 96.8
Nitab4.5_0000014g0010 Nicotiana tabacum HOM05D000801 ORTHO05D000007 4.6e-07 60.1 97 32.0
SHI38560 Sapria himalayana HOM05D000024 ORTHO05D000007 4.6e-07 60.1 79 38.0
Nitab4.5_0000175g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.1e-07 59.7 135 30.4
Nitab4.5_0002909g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.1e-07 59.7 138 29.7
Nitab4.5_0003347g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.1e-07 59.7 136 27.9
Nitab4.5_0005246g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.1e-07 59.7 84 35.7
Nitab4.5_0009493g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.1e-07 59.7 105 30.5
PGSC0003DMG400028706 Solanum tuberosum HOM05D000801 ORTHO05D000007 6.1e-07 59.7 100 33.0
HPP92_000871 Vanilla planifolia HOM05D000024 ORTHO05D000007 6.1e-07 59.7 82 37.8
SHI47371 Sapria himalayana HOM05D000024 ORTHO05D000006 7.9e-07 59.3 110 27.3
SHI49928 Sapria himalayana HOM05D000024 ORTHO05D000007 7.9e-07 59.3 110 27.3
SHI50499 Sapria himalayana HOM05D000024 ORTHO05D000006 7.9e-07 59.3 86 34.9
Nitab4.5_0002170g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-06 58.9 81 37.0
Nitab4.5_0002828g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-06 58.9 139 28.1
Peaxi162Scf00330g01114 Petunia axillaris HOM05D000801 ORTHO05D014243 1.0e-06 58.9 149 27.5
Peaxi162Scf00460g00041 Petunia axillaris HOM05D000024 ORTHO05D000007 1.0e-06 58.9 115 30.4
SHI34178 Sapria himalayana HOM05D000024 ORTHO05D000007 1.0e-06 58.9 136 24.3
SHI34379 Sapria himalayana HOM05D000024 ORTHO05D000007 1.0e-06 58.9 102 35.3
PGSC0003DMG400042385 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.0e-06 58.9 146 25.3
CAN.G128.121 Capsicum annuum HOM05D001907 ORTHO05D015557 1.3e-06 58.5 66 37.9
Nitab4.5_0000721g0270 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-06 58.5 84 35.7
Nitab4.5_0001747g0020 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.3e-06 58.5 98 30.6
Nitab4.5_0008706g0020 Nicotiana tabacum HOM05D000801 ORTHO05D000007 1.3e-06 58.5 98 30.6
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-06 58.5 122 30.3
SHI41198 Sapria himalayana HOM05D000024 ORTHO05D000007 1.3e-06 58.5 78 37.2
SHI41237 Sapria himalayana HOM05D000024 ORTHO05D000007 1.3e-06 58.5 78 37.2
SHI50371 Sapria himalayana HOM05D000024 ORTHO05D000007 1.3e-06 58.5 102 34.3
Nitab4.5_0000188g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-06 58.2 86 34.9
Nitab4.5_0001492g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-06 58.2 150 27.3
SHI31733 Sapria himalayana HOM05D000024 ORTHO05D000007 1.8e-06 58.2 84 34.5
Nitab4.5_0001307g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-06 57.8 150 27.3
Nitab4.5_0001349g0120 Nicotiana tabacum HOM05D013592 ORTHO05D049377 2.3e-06 57.8 53 47.2
Nitab4.5_0002177g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-06 57.8 95 32.6
Nitab4.5_0002966g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-06 57.8 84 34.5
Nitab4.5_0004118g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-06 57.8 134 29.1
Nitab4.5_0004897g0030 Nicotiana tabacum HOM05D000801 ORTHO05D000007 2.3e-06 57.8 98 32.7
Nitab4.5_0005686g0070 Nicotiana tabacum HOM05D000801 ORTHO05D000007 2.3e-06 57.8 94 29.8
Nitab4.5_0000002g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-06 57.4 137 28.5
Nitab4.5_0000582g0150 Nicotiana tabacum HOM05D001454 ORTHO05D000007 3.0e-06 57.4 100 31.0
Nitab4.5_0000691g0060 Nicotiana tabacum HOM05D032414 ORTHO05D000007 3.0e-06 57.4 153 28.8
Nitab4.5_0000742g0090 Nicotiana tabacum HOM05D000801 ORTHO05D000007 3.0e-06 57.4 84 34.5
Nitab4.5_0004475g0030 Nicotiana tabacum HOM05D000801 ORTHO05D000007 3.0e-06 57.4 81 37.0
Nitab4.5_0000077g0080 Nicotiana tabacum HOM05D000801 ORTHO05D000007 3.9e-06 57.0 81 37.0
Nitab4.5_0001264g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.9e-06 57.0 84 35.7
Nitab4.5_0002286g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.9e-06 57.0 82 39.0
SHI28442 Sapria himalayana HOM05D000024 ORTHO05D000007 3.9e-06 57.0 110 29.1
SHI46190 Sapria himalayana HOM05D000024 ORTHO05D000007 3.9e-06 57.0 82 34.1
SHI46205 Sapria himalayana HOM05D000024 ORTHO05D000007 3.9e-06 57.0 82 34.1
Sopen08g015180 Solanum pennellii HOM05D000003 ORTHO05D000004 3.9e-06 57.0 40 52.5
Nitab4.5_0000109g0440 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-06 56.6 129 31.0
Nitab4.5_0003102g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-06 56.6 75 34.7
Nitab4.5_0003255g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-06 56.6 160 28.1
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-06 56.6 110 26.4
SHI36099 Sapria himalayana HOM05D000024 ORTHO05D000007 5.1e-06 56.6 108 26.9
SHI45730 Sapria himalayana HOM05D000024 ORTHO05D000007 5.1e-06 56.6 86 33.7
PGSC0003DMG400034467 Solanum tuberosum HOM05D000801 ORTHO05D000007 5.1e-06 56.6 142 28.9
Nitab4.5_0000113g0170 Nicotiana tabacum HOM05D000801 ORTHO05D000007 6.7e-06 56.2 79 34.2
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.7e-06 56.2 155 27.1
Nitab4.5_0000889g0010 Nicotiana tabacum HOM05D000801 ORTHO05D000007 6.7e-06 56.2 81 34.6
Nitab4.5_0000961g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.7e-06 56.2 110 30.9
Nitab4.5_0002061g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.7e-06 56.2 119 31.1
Nitab4.5_0007079g0010 Nicotiana tabacum HOM05D000801 ORTHO05D000007 6.7e-06 56.2 97 30.9
Sopen11g013390 Solanum pennellii HOM05D000024 ORTHO05D000007 6.7e-06 56.2 56 41.1
Nitab4.5_0005065g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.7e-06 55.8 82 32.9
Nitab4.5_0013170g0030 Nicotiana tabacum HOM05D000801 ORTHO05D000007 8.7e-06 55.8 83 33.7
Sabra08G0163700 Salix brachista HOM05D000024 ORTHO05D000007 8.7e-06 55.8 99 26.3
SHI06357 Sapria himalayana HOM05D000024 ORTHO05D000007 8.7e-06 55.8 111 27.9
SHI33537 Sapria himalayana HOM05D000024 ORTHO05D000007 8.7e-06 55.8 86 33.7
SHI35423 Sapria himalayana HOM05D000024 ORTHO05D000007 8.7e-06 55.8 108 25.9
SHI50242 Sapria himalayana HOM05D000024 ORTHO05D000007 8.7e-06 55.8 117 28.2


User provided reference genes

Program Settings