Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g014750 Solanum pennellii HOM05D000042 ORTHO05D049399 1.7e-44 182.6 112 100.0
Solyc10g044965.1 Solanum lycopersicum HOM05D000042 ORTHO05D000028 1.4e-43 179.5 112 98.2
CSS0007500 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 5.2e-09 64.7 102 51.0
GSVIVG01038474001 Vitis vinifera HOM05D000042 ORTHO05D000028 1.2e-08 63.5 46 67.4
CSS0003338 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 1.5e-08 63.2 102 51.0
Gohir.A11G050000 Gossypium hirsutum HOM05D000042 ORTHO05D000028 5.7e-08 61.2 47 61.7
Nitab4.5_0002430g0050 Nicotiana tabacum HOM05D000042 ORTHO05D049399 7.5e-08 60.8 71 54.9
THA.LOC104804425 Tarenaya hassleriana HOM05D000042 ORTHO05D000028 9.8e-08 60.5 84 39.3
Gorai.007G058200 Gossypium raimondii HOM05D000042 ORTHO05D000028 1.3e-07 60.1 47 61.7
FAN28G0449 Fragaria x ananassa HOM05D000042 ORTHO05D000028 2.2e-07 59.3 107 38.3
vmacro05524 Vaccinium macrocarpon HOM05D000042 ORTHO05D000028 2.2e-07 59.3 106 44.3
Gohir.D11G053400 Gossypium hirsutum HOM05D000042 ORTHO05D000028 2.8e-07 58.9 47 59.6
Sed0012885 Sechium edule HOM05D000042 ORTHO05D000028 2.8e-07 58.9 98 38.8
Manes.07G046300 Manihot esculenta HOM05D000042 ORTHO05D000028 3.7e-07 58.5 102 47.1
Oeu042401.1 Olea europaea HOM05D000042 ORTHO05D000028 3.7e-07 58.5 46 65.2
Duzib052G0797 Durio zibethinus HOM05D000042 ORTHO05D000028 4.8e-07 58.2 82 56.1
Potri.002G109601 Populus trichocarpa HOM05D000042 ORTHO05D000028 6.3e-07 57.8 106 35.8
ClCG10G009840 Citrullus lanatus HOM05D000042 ORTHO05D000028 8.3e-07 57.4 93 37.6
FAN19G0053 Fragaria x ananassa HOM05D000042 ORTHO05D000028 8.3e-07 57.4 99 35.4
PSO700G0165 Papaver somniferum HOM05D000042 ORTHO05D000028 8.3e-07 57.4 104 32.7
Prupe.6G208900 Prunus persica HOM05D000042 ORTHO05D000028 8.3e-07 57.4 106 35.8
Ciclev10027571m.g Citrus clementina HOM05D000042 ORTHO05D000028 1.4e-06 56.6 47 57.4
COL.COLO4_01055 Corchorus olitorius HOM05D000042 ORTHO05D000028 1.4e-06 56.6 100 47.0
Rhsim06G0069700 Rhododendron simsii HOM05D000042 ORTHO05D000028 1.4e-06 56.6 48 54.2
Rhsim08G0088000 Rhododendron simsii HOM05D000042 ORTHO05D000028 1.4e-06 56.6 110 42.7
Ciclev10027303m.g Citrus clementina HOM05D000042 ORTHO05D000028 1.8e-06 56.2 47 57.4
Cc07_g07970 Coffea canephora HOM05D000042 ORTHO05D000028 1.8e-06 56.2 48 58.3
FvH4_1g19110 Fragaria vesca HOM05D000042 ORTHO05D000028 1.8e-06 56.2 99 35.4
Gohir.D02G202200 Gossypium hirsutum HOM05D000042 ORTHO05D000028 1.8e-06 56.2 46 58.7
Prupe.1G538800 Prunus persica HOM05D000042 ORTHO05D000028 1.8e-06 56.2 107 35.5
THA.LOC104807831 Tarenaya hassleriana HOM05D000042 ORTHO05D000028 1.8e-06 56.2 48 56.2
MSTRG.22181 Avicennia marina HOM05D000042 ORTHO05D000028 2.4e-06 55.8 48 56.2
Thhalv10022974m.g Eutrema salsugineum HOM05D000042 ORTHO05D000028 2.4e-06 55.8 111 32.4
MBI16_g07267_MAGBIO Magnolia biondii HOM05D000042 ORTHO05D000028 2.4e-06 55.8 48 54.2
Manes.05G187800 Manihot esculenta HOM05D000042 ORTHO05D000028 2.4e-06 55.8 106 34.9
QL11p026266 Quercus lobata HOM05D000042 ORTHO05D000028 2.4e-06 55.8 72 43.1
Thecc.02G125800 Theobroma cacao HOM05D000042 ORTHO05D000028 2.4e-06 55.8 46 58.7
Psat2g133760 Pisum sativum HOM05D000042 ORTHO05D000028 3.1e-06 55.5 76 44.7
Sabra16G0177600 Salix brachista HOM05D000042 ORTHO05D000028 3.1e-06 55.5 42 64.3
Actinidia15930 Actinidia chinensis HOM05D000042 ORTHO05D000028 4.1e-06 55.1 48 54.2
Nn1g05657 Nelumbo nucifera HOM05D000042 ORTHO05D000028 4.1e-06 55.1 48 52.1
Nitab4.5_0010043g0020 Nicotiana tabacum HOM05D000042 ORTHO05D000028 4.1e-06 55.1 109 33.0
Potri.001G284301 Populus trichocarpa HOM05D000042 ORTHO05D000028 4.1e-06 55.1 46 58.7
Potri.001G284600 Populus trichocarpa HOM05D000042 ORTHO05D000028 4.1e-06 55.1 46 58.7
Rhsim05G0099300 Rhododendron simsii HOM05D000042 ORTHO05D000028 4.1e-06 55.1 84 36.9
Cpa.g.sc961.1 Carica papaya HOM05D000042 ORTHO05D000028 5.4e-06 54.7 47 57.4
ClCG11G014760 Citrullus lanatus HOM05D000042 ORTHO05D000028 5.4e-06 54.7 46 52.2
COL.COLO4_35302 Corchorus olitorius HOM05D000042 ORTHO05D000028 5.4e-06 54.7 48 54.2
Haze_22494 Corylus avellana HOM05D000042 ORTHO05D000028 5.4e-06 54.7 48 54.2
Hma1.2p1_0010F.1_g006420 Hydrangea macrophylla HOM05D000042 ORTHO05D000028 5.4e-06 54.7 89 51.7
Potri.009G079000 Populus trichocarpa HOM05D000042 ORTHO05D000028 5.4e-06 54.7 42 64.3
arahy.Tifrunner.gnm1.ann1.9Y4GVD Arachis hypogaea HOM05D000042 ORTHO05D000028 7.0e-06 54.3 45 57.8
arahy.Tifrunner.gnm1.ann1.B128UN Arachis hypogaea HOM05D000042 ORTHO05D000028 7.0e-06 54.3 45 57.8
MELO3C018049.2 Cucumis melo HOM05D000042 ORTHO05D000028 7.0e-06 54.3 48 56.2
CsaV3_3G048150 Cucumis sativus L. HOM05D000042 ORTHO05D000028 7.0e-06 54.3 48 50.0
Manes.18G057830 Manihot esculenta HOM05D000042 ORTHO05D000028 7.0e-06 54.3 48 56.2
Oeu035069.1 Olea europaea HOM05D000042 ORTHO05D000028 7.0e-06 54.3 46 56.5
Phvul.002G143866 Phaseolus vulgaris HOM05D000042 ORTHO05D000028 7.0e-06 54.3 73 43.8
Ca_25210_v3 Cicer arietinum L. HOM05D000042 ORTHO05D000028 9.1e-06 53.9 77 40.3
PSO541G3986 Papaver somniferum HOM05D000042 ORTHO05D000028 9.1e-06 53.9 103 44.7
Sabra09G0061000 Salix brachista HOM05D000042 ORTHO05D000028 9.1e-06 53.9 47 55.3
Sc15g0003030 Simmondsia chinensis HOM05D000042 ORTHO05D000028 9.1e-06 53.9 48 58.3
TWI14G0243 Tripterygium wilfordii HOM05D000042 ORTHO05D000028 9.1e-06 53.9 48 56.2
TAR628G1225 Trochodendron aralioides HOM05D000042 ORTHO05D000028 9.1e-06 53.9 48 54.2


User provided reference genes

Program Settings