Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g005960 Solanum pennellii HOM05D000047 ORTHO05D011806 1.3e-85 319.7 168 100.0
Solyc10g012180.1 Solanum lycopersicum HOM05D000047 ORTHO05D011806 3.3e-84 315.1 168 98.2
Sopen10g005940 Solanum pennellii HOM05D000047 ORTHO05D011806 5.6e-84 314.3 168 98.2
Solyc10g012200.1 Solanum lycopersicum HOM05D000047 ORTHO05D011806 1.0e-77 293.5 166 93.4
PGSC0003DMG400019393 Solanum tuberosum HOM05D000047 ORTHO05D011806 4.5e-73 278.1 174 85.6
Sopen10g006210 Solanum pennellii HOM05D000047 ORTHO05D011806 1.4e-58 229.9 170 72.4
Solyc10g012380.2 Solanum lycopersicum HOM05D000047 ORTHO05D011806 3.1e-50 202.2 145 73.1
PGSC0003DMG400035501 Solanum tuberosum HOM05D000047 ORTHO05D011806 8.2e-35 151.0 104 73.1
PGSC0003DMG400037338 Solanum tuberosum HOM05D000047 ORTHO05D011806 1.2e-28 130.6 172 47.7
CAN.G111.33 Capsicum annuum HOM05D000047 ORTHO05D011806 3.0e-21 105.9 98 61.2
Peaxi162Scf00008g00273 Petunia axillaris HOM05D011546 ORTHO05D011806 1.2e-17 94.0 183 39.3
Nitab4.5_0001549g0020 Nicotiana tabacum HOM05D011546 ORTHO05D011806 2.5e-15 86.3 182 38.5
Nitab4.5_0001862g0020 Nicotiana tabacum HOM05D011546 ORTHO05D011806 4.0e-13 79.0 158 36.1
Nitab4.5_0000436g0010 Nicotiana tabacum HOM05D011546 ORTHO05D011806 7.5e-12 74.7 164 37.2
Nitab4.5_0000977g0170 Nicotiana tabacum HOM05D011546 ORTHO05D011806 1.3e-11 73.9 168 35.7
Nitab4.5_0003651g0030 Nicotiana tabacum HOM05D011546 ORTHO05D011806 5.4e-10 68.6 179 33.0
Nitab4.5_0023197g0010 Nicotiana tabacum HOM05D011546 ORTHO05D011806 5.4e-10 68.6 144 38.9
CAN.G638.76 Capsicum annuum HOM05D011546 ORTHO05D011806 4.6e-09 65.5 181 30.9
Peaxi162Scf00803g00314 Petunia axillaris HOM05D045933 ORTHO05D011806 5.9e-09 65.1 167 31.7
CAN.G1352.5 Capsicum annuum HOM05D011546 ORTHO05D011806 3.0e-08 62.8 55 52.7
Peaxi162Scf00803g00313 Petunia axillaris HOM05D045933 ORTHO05D011806 6.6e-08 61.6 170 30.0
CAN.G1352.8 Capsicum annuum HOM05D011546 ORTHO05D011806 2.5e-07 59.7 55 49.1
TAR628G1329 Trochodendron aralioides HOM05D000894 ORTHO05D001833 3.3e-07 59.3 140 30.7
Glyma.18G143800 Glycine max HOM05D000203 ORTHO05D000135 4.3e-07 58.9 142 27.5
Actinidia16725 Actinidia chinensis HOM05D000203 ORTHO05D000135 5.6e-07 58.5 138 29.7
Cpa.g.sc505.2 Carica papaya HOM05D000203 ORTHO05D000135 5.6e-07 58.5 63 44.4
Nitab4.5_0000977g0180 Nicotiana tabacum HOM05D011546 ORTHO05D011806 5.6e-07 58.5 102 37.3
Sed0017436 Sechium edule HOM05D000203 ORTHO05D000135 7.3e-07 58.2 143 30.8
Cpa.g.sc348.3 Carica papaya HOM05D000203 ORTHO05D000135 1.2e-06 57.4 63 46.0
Nitab4.5_0013840g0010 Nicotiana tabacum HOM05D011546 ORTHO05D011806 1.2e-06 57.4 146 32.9
TWI60G0466 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 1.2e-06 57.4 54 44.4
MELO3C002723.2 Cucumis melo HOM05D000203 ORTHO05D000135 1.6e-06 57.0 174 25.9
SpUn0001_0620 Schrenkiella parvula HOM05D000203 ORTHO05D000135 1.6e-06 57.0 67 40.3
Hund24799 Selenicereus undatus HOM05D005723 ORTHO05D005968 1.6e-06 57.0 55 45.5
Cpa.g.c30114.1 Carica papaya HOM05D000203 ORTHO05D000135 2.1e-06 56.6 63 42.9
Gohir.A01G180850 Gossypium hirsutum HOM05D000203 ORTHO05D000135 2.1e-06 56.6 77 33.8
Actinidia19512 Actinidia chinensis HOM05D000203 ORTHO05D000135 2.8e-06 56.2 57 42.1
Cpa.g.sc654.4 Carica papaya HOM05D000203 ORTHO05D000135 2.8e-06 56.2 63 44.4
CsaV3_1G032570 Cucumis sativus L. HOM05D000203 ORTHO05D000135 2.8e-06 56.2 174 25.9
Nitab4.5_0000047g0290 Nicotiana tabacum HOM05D000203 ORTHO05D000135 2.8e-06 56.2 53 47.2
Nitab4.5_0004004g0010 Nicotiana tabacum HOM05D000203 ORTHO05D000135 2.8e-06 56.2 52 48.1
Nitab4.5_0005046g0020 Nicotiana tabacum HOM05D000203 ORTHO05D000135 2.8e-06 56.2 53 47.2
CiPaw.06G163000 Carya illinoinensis HOM05D000203 ORTHO05D000135 3.6e-06 55.8 57 42.1
Nitab4.5_0000047g0250 Nicotiana tabacum HOM05D000203 ORTHO05D000135 3.6e-06 55.8 53 47.2
Nitab4.5_0002011g0080 Nicotiana tabacum HOM05D000203 ORTHO05D000135 3.6e-06 55.8 53 45.3
FAN15G2402 Fragaria x ananassa HOM05D000203 ORTHO05D000135 4.7e-06 55.5 63 44.4
Nitab4.5_0000047g0270 Nicotiana tabacum HOM05D000203 ORTHO05D000135 4.7e-06 55.5 53 47.2
Cpa.g.c30689 Carica papaya HOM05D000203 ORTHO05D000135 6.2e-06 55.1 63 41.3
Cpa.g.sc347.11 Carica papaya HOM05D000203 ORTHO05D000135 6.2e-06 55.1 63 42.9
Cpa.g.sc695.7 Carica papaya HOM05D000203 ORTHO05D000135 6.2e-06 55.1 136 30.1
Gohir.D01G171950 Gossypium hirsutum HOM05D000203 ORTHO05D000135 6.2e-06 55.1 77 32.5
Gorai.002G213500 Gossypium raimondii HOM05D000203 ORTHO05D000135 6.2e-06 55.1 77 32.5
Nitab4.5_0005046g0060 Nicotiana tabacum HOM05D000203 ORTHO05D000135 6.2e-06 55.1 57 43.9
AT5G60440 Arabidopsis thaliana HOM05D000203 ORTHO05D000135 8.0e-06 54.7 67 43.3
Cpa.g.sc851.1 Carica papaya HOM05D000203 ORTHO05D000135 8.0e-06 54.7 63 42.9
Lalb_Chr07g0187161 Lupinus albus HOM05D000203 ORTHO05D000135 8.0e-06 54.7 156 28.2
Sopen01g030700 Solanum pennellii HOM05D000203 ORTHO05D000135 8.0e-06 54.7 54 46.3


User provided reference genes

Program Settings