Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 5.8e-82 307.4 142 100.0
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 5.8e-82 307.4 142 100.0
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 5.5e-72 274.2 142 86.6
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.2e-71 273.1 142 86.6
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 3.0e-62 241.9 182 61.5
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 1.2e-58 229.9 143 67.8
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 2.0e-58 229.2 142 71.8
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 4.5e-58 228.0 142 71.1
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 8.5e-57 223.8 142 71.1
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 8.5e-57 223.8 144 68.8
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 9.3e-56 220.3 144 70.8
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 2.1e-55 219.2 144 68.1
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 4.6e-55 218.0 107 82.2
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 6.1e-55 217.6 145 66.2
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 6.1e-55 217.6 144 68.8
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 2.3e-54 215.7 142 66.2
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 6.7e-54 214.2 144 63.9
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 8.7e-54 213.8 142 64.8
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 1.5e-53 213.0 144 66.7
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 1.9e-53 212.6 142 67.6
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 1.9e-53 212.6 142 67.6
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 1.9e-53 212.6 142 67.6
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 1.9e-53 212.6 142 67.6
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 1.9e-53 212.6 142 67.6
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 1.9e-53 212.6 143 65.7
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 2.5e-53 212.2 142 66.2
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 9.7e-53 210.3 145 61.4
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 9.7e-53 210.3 142 66.9
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.3e-52 209.9 142 65.5
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 2.2e-52 209.1 142 65.5
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 2.8e-52 208.8 142 63.4
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 2.8e-52 208.8 143 67.8
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 6.3e-52 207.6 142 62.7
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 6.3e-52 207.6 142 62.7
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 6.3e-52 207.6 142 62.7
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 1.4e-51 206.5 142 63.4
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 1.4e-51 206.5 142 64.8
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 1.8e-51 206.1 144 64.6
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 3.1e-51 205.3 138 66.7
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 4.1e-51 204.9 108 75.9
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 4.1e-51 204.9 142 64.1
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 9.1e-51 203.8 142 64.8
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 9.1e-51 203.8 142 65.5
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 1.5e-50 203.0 142 62.0
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 1.5e-50 203.0 142 66.2
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 1.5e-50 203.0 142 64.1
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 1.5e-50 203.0 115 72.2
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 1.5e-50 203.0 174 54.6
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 2.0e-50 202.6 142 64.1
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 2.6e-50 202.2 142 64.1
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 2.6e-50 202.2 142 65.5
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 2.6e-50 202.2 142 65.5
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 2.6e-50 202.2 142 63.4
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 3.4e-50 201.8 139 61.2
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 4.5e-50 201.4 150 62.0
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 5.9e-50 201.1 142 63.4
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 2.9e-49 198.7 142 61.3
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 3.8e-49 198.4 142 62.0
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 3.8e-49 198.4 106 75.5
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 5.0e-49 198.0 142 64.8
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 6.5e-49 197.6 142 61.3
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 8.5e-49 197.2 115 74.8
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 1.1e-48 196.8 142 62.0
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 1.9e-48 196.1 144 59.7
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 3.2e-48 195.3 119 67.2
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 4.2e-48 194.9 154 59.7
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 4.2e-48 194.9 108 72.2
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 4.2e-48 194.9 144 62.5
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 9.4e-48 193.7 106 67.9
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 2.1e-47 192.6 142 57.7
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 2.7e-47 192.2 107 70.1
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 3.6e-47 191.8 142 58.5
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 3.6e-47 191.8 108 73.1
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 4.6e-47 191.4 143 62.9
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 4.6e-47 191.4 148 59.5
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 7.9e-47 190.7 105 70.5
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 7.9e-47 190.7 107 69.2
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 1.0e-46 190.3 143 61.5
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 1.0e-46 190.3 132 62.1
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 1.4e-46 189.9 103 76.7
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 5.1e-46 188.0 142 59.2
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 2.6e-45 185.7 161 57.1
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 2.6e-45 185.7 142 59.9
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 4.4e-45 184.9 145 55.2
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 9.7e-45 183.7 106 67.9
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 1.3e-44 183.3 142 59.2
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 1.7e-44 183.0 106 67.9
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 6.9e-43 177.6 100 71.0
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 6.9e-43 177.6 143 51.0
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 2.6e-42 175.6 119 63.9
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 4.5e-42 174.9 159 53.5
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 7.7e-42 174.1 91 78.0
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 2.2e-41 172.6 109 63.3
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 1.1e-40 170.2 123 63.4
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 5.5e-40 167.9 183 45.4
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 1.6e-39 166.4 116 66.4
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 7.9e-39 164.1 101 57.4
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 1.0e-38 163.7 146 54.1
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 1.0e-38 163.7 143 55.9
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 2.3e-38 162.5 106 65.1
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 4.8e-36 154.8 78 82.1
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 7.0e-35 151.0 117 58.1
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 1.6e-34 149.8 116 58.6
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 2.0e-34 149.4 90 74.4
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 1.1e-32 143.7 155 48.4
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 2.5e-32 142.5 78 71.8
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 1.8e-30 136.3 82 68.3
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 1.2e-29 133.7 101 66.3
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 4.8e-28 128.3 98 61.2
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.8e-27 126.3 98 61.2
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 3.5e-26 122.1 87 64.4
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 1.7e-25 119.8 107 56.1
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 1.1e-24 117.1 98 57.1
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 1.1e-24 117.1 98 57.1
PGSC0003DMG400022813 Solanum tuberosum HOM05D006296 ORTHO05D007777 5.5e-24 114.8 64 92.2
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 2.1e-23 112.8 100 54.0
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 2.7e-23 112.5 93 48.4
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 1.4e-22 110.2 101 53.5
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 5.9e-18 94.7 101 45.5
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 2.5e-16 89.4 56 64.3
Cpa.g.sc27.57 Carica papaya HOM05D006296 ORTHO05D007777 7.0e-11 71.2 66 47.0
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 2.9e-09 65.9 38 73.7
MBI18_g17001_MAGBIO Magnolia biondii HOM05D006296 ORTHO05D007777 3.8e-09 65.5 66 51.5
CSS0025334 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 9.5e-08 60.8 29 72.4
C07p51340 Brassica napus HOM05D006296 ORTHO05D007777 2.8e-07 59.3 66 51.5
BolC7t45633H Brassica oleracea HOM05D006296 ORTHO05D007777 6.8e-06 54.7 65 47.7


User provided reference genes

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