Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g034980 Solanum pennellii HOM05D006427 ORTHO05D008147 2.8e-59 231.9 130 100.0
Solyc09g092110.4 Solanum lycopersicum HOM05D006427 ORTHO05D008147 2.5e-55 218.8 130 95.4
PGSC0003DMG400026417 Solanum tuberosum HOM05D006427 ORTHO05D008147 1.0e-48 196.8 136 87.5
Peaxi162Scf00128g01753 Petunia axillaris HOM05D006427 ORTHO05D008147 5.6e-31 137.9 139 59.0
Duzib052G1158 Durio zibethinus HOM05D006427 ORTHO05D008147 2.2e-27 125.9 83 71.1
Nn3g16291 Nelumbo nucifera HOM05D006427 ORTHO05D008147 1.4e-26 123.2 125 56.8
CSS0005682 Camellia sinensis var. sinensis HOM05D006427 ORTHO05D008147 1.9e-26 122.9 140 51.4
CANSAT01G2059 Cannabis sativa HOM05D006427 ORTHO05D008147 2.4e-26 122.5 146 51.4
Duzib132G1024 Durio zibethinus HOM05D006427 ORTHO05D008147 4.1e-26 121.7 138 53.6
Dinv19142 Davidia involucrata HOM05D006427 ORTHO05D008147 5.4e-26 121.3 142 50.0
TAR371G1278 Trochodendron aralioides HOM05D006427 ORTHO05D006987 9.2e-26 120.6 137 50.4
MBI07_g07335_MAGBIO Magnolia biondii HOM05D006427 ORTHO05D008147 2.1e-25 119.4 82 67.1
PSO017G1866 Papaver somniferum HOM05D006427 ORTHO05D008147 2.1e-25 119.4 83 68.7
COL.COLO4_21789 Corchorus olitorius HOM05D006427 ORTHO05D008147 2.7e-25 119.0 81 71.6
PSO478G1388 Papaver somniferum HOM05D006427 ORTHO05D008147 2.7e-25 119.0 83 68.7
GSVIVG01004944001 Vitis vinifera HOM05D006427 ORTHO05D008147 3.5e-25 118.6 143 48.3
CDE02G3326 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 4.6e-25 118.2 132 47.0
Thecc.02G193800 Theobroma cacao HOM05D006427 ORTHO05D008147 4.6e-25 118.2 138 51.4
CsaV3_6G007780 Cucumis sativus L. HOM05D006427 ORTHO05D008147 7.8e-25 117.5 81 67.9
Aqoxy5G03163 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 1.0e-24 117.1 142 47.9
ATR0582G340 Amborella trichopoda HOM05D006427 ORTHO05D008147 1.3e-24 116.7 82 67.1
QL03p049638 Quercus lobata HOM05D006427 ORTHO05D008147 1.3e-24 116.7 82 64.6
ClCG06G001750 Citrullus lanatus HOM05D006427 ORTHO05D006987 1.7e-24 116.3 78 69.2
CDE06G0025 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 2.3e-24 115.9 132 47.0
MELO3C022354.2 Cucumis melo HOM05D006427 ORTHO05D008147 3.0e-24 115.5 81 66.7
Sed0027051 Sechium edule HOM05D006427 ORTHO05D008147 3.0e-24 115.5 78 67.9
arahy.Tifrunner.gnm1.ann1.BNAN8S Arachis hypogaea HOM05D006427 ORTHO05D008147 3.9e-24 115.2 141 47.5
Gohir.A04G100800 Gossypium hirsutum HOM05D006427 ORTHO05D008147 5.1e-24 114.8 82 67.1
Gohir.D04G140100 Gossypium hirsutum HOM05D006427 ORTHO05D008147 5.1e-24 114.8 82 67.1
Gorai.012G125000 Gossypium raimondii HOM05D006427 ORTHO05D008147 8.6e-24 114.0 131 49.6
arahy.Tifrunner.gnm1.ann1.YL5YHR Arachis hypogaea HOM05D006427 ORTHO05D008147 1.1e-23 113.6 141 46.8
HanXRQChr16g0499601 Helianthus annuus HOM05D006427 ORTHO05D008147 1.1e-23 113.6 78 70.5
Sabra01G0046200 Salix brachista HOM05D006427 ORTHO05D008147 1.9e-23 112.8 133 51.1
TWI36G1420 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 1.9e-23 112.8 78 67.9
vmacro10314 Vaccinium macrocarpon HOM05D000095 ORTHO05D008147 1.9e-23 112.8 121 48.8
FAN12G4324 Fragaria x ananassa HOM05D006427 ORTHO05D008147 2.5e-23 112.5 80 66.2
Glyma.16G049000 Glycine max HOM05D006427 ORTHO05D008147 2.5e-23 112.5 77 66.2
Nn4g22155 Nelumbo nucifera HOM05D006427 ORTHO05D008147 2.5e-23 112.5 84 66.7
Atru.chr10.1283 Acer truncatum HOM05D006427 ORTHO05D008147 4.3e-23 111.7 142 48.6
FAN07G1740 Fragaria x ananassa HOM05D006427 ORTHO05D008147 4.3e-23 111.7 82 68.3
FAN17G2476 Fragaria x ananassa HOM05D006427 ORTHO05D006987 4.3e-23 111.7 82 68.3
Atru.chr2.853 Acer truncatum HOM05D006427 ORTHO05D008147 5.6e-23 111.3 83 62.7
Manes.09G187300 Manihot esculenta HOM05D006427 ORTHO05D008147 5.6e-23 111.3 77 67.5
Potri.001G066400 Populus trichocarpa HOM05D006427 ORTHO05D008147 5.6e-23 111.3 131 50.4
Atru.chr12.1402 Acer truncatum HOM05D006427 ORTHO05D008147 9.5e-23 110.5 78 65.4
Ciclev10006190m.g Citrus clementina HOM05D006427 ORTHO05D008147 9.5e-23 110.5 83 63.9
Glyma.19G102400 Glycine max HOM05D006427 ORTHO05D008147 9.5e-23 110.5 77 64.9
Prupe.1G216700 Prunus persica HOM05D006427 ORTHO05D008147 9.5e-23 110.5 80 63.8
Eucgr.G01965 Eucalyptus grandis HOM05D006427 ORTHO05D008147 1.2e-22 110.2 78 65.4
MSTRG.3040 Avicennia marina HOM05D006427 ORTHO05D008147 2.8e-22 109.0 133 46.6
ECA234G1075 Erigeron canadensis HOM05D006427 ORTHO05D008147 3.6e-22 108.6 83 63.9
Hma1.2p1_1436F.1_g283150 Hydrangea macrophylla HOM05D006427 ORTHO05D008147 4.7e-22 108.2 160 43.1
Psat3g093640 Pisum sativum HOM05D006427 ORTHO05D008147 4.7e-22 108.2 143 44.8
Rhsim08G0039400 Rhododendron simsii HOM05D006427 ORTHO05D008147 4.7e-22 108.2 138 46.4
MD16G1129900 Malus domestica HOM05D006427 ORTHO05D008147 8.1e-22 107.5 123 48.8
RhsimUnG0101500 Rhododendron simsii HOM05D006427 ORTHO05D008147 8.1e-22 107.5 79 64.6
Thecc.04G047300 Theobroma cacao HOM05D006427 ORTHO05D008147 1.1e-21 107.1 136 44.1
HPP92_021622 Vanilla planifolia HOM05D006427 ORTHO05D008147 1.1e-21 107.1 81 61.7
Potri.003G163402 Populus trichocarpa HOM05D006427 ORTHO05D008147 1.4e-21 106.7 74 68.9
vmacro18378 Vaccinium macrocarpon HOM05D006427 ORTHO05D008147 1.4e-21 106.7 79 65.8
Lj3g0013404 Lotus japonicus HOM05D006427 ORTHO05D008147 1.8e-21 106.3 77 63.6
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 2.4e-21 105.9 77 62.3
C02p53270 Brassica napus HOM05D006427 ORTHO05D008147 2.4e-21 105.9 77 62.3
Lj1g0026899 Lotus japonicus HOM05D006427 ORTHO05D008147 2.4e-21 105.9 79 63.3
Haze_14945 Corylus avellana HOM05D006427 ORTHO05D008147 3.1e-21 105.5 115 47.0
Gohir.A11G063600 Gossypium hirsutum HOM05D006427 ORTHO05D008147 3.1e-21 105.5 79 62.0
Gohir.D11G067900 Gossypium hirsutum HOM05D006427 ORTHO05D008147 3.1e-21 105.5 79 62.0
Gorai.007G072700 Gossypium raimondii HOM05D006427 ORTHO05D008147 3.1e-21 105.5 79 62.0
Ca_08136_v3 Cicer arietinum L. HOM05D006427 ORTHO05D008147 5.2e-21 104.8 78 62.8
Cc11_g15110 Coffea canephora HOM05D006427 ORTHO05D008147 5.2e-21 104.8 80 60.0
CiPaw.03G002500 Carya illinoinensis HOM05D006427 ORTHO05D008147 6.8e-21 104.4 80 62.5
THA.LOC104805303 Tarenaya hassleriana HOM05D006427 ORTHO05D008147 6.8e-21 104.4 78 64.1
Cpa.g.sc70.74 Carica papaya HOM05D006427 ORTHO05D008147 8.9e-21 104.0 74 62.2
Eucgr.G01934 Eucalyptus grandis HOM05D006427 ORTHO05D008147 8.9e-21 104.0 83 61.4
Phvul.001G085200 Phaseolus vulgaris HOM05D006427 ORTHO05D008147 8.9e-21 104.0 79 60.8
Sp2g15860 Schrenkiella parvula HOM05D006427 ORTHO05D008147 8.9e-21 104.0 77 62.3
BcaC04g23927 Brassica carinata HOM05D006427 ORTHO05D008147 1.2e-20 103.6 139 44.6
C09p03290 Brassica napus HOM05D006427 ORTHO05D008147 1.2e-20 103.6 139 44.6
Duzib264G1258 Durio zibethinus HOM05D006427 ORTHO05D008147 1.2e-20 103.6 139 44.6
VMungo1383G1825 Vigna mungo HOM05D006427 ORTHO05D008147 1.2e-20 103.6 141 45.4
A09p03110 Brassica napus HOM05D001087 ORTHO05D001846 1.5e-20 103.2 121 45.5
BraA09t35950Z Brassica rapa HOM05D006427 ORTHO05D003553 1.5e-20 103.2 121 45.5
SalBow4G0295 Salvia bowleyana HOM05D002416 ORTHO05D002554 1.5e-20 103.2 75 58.7
SalBow4G2027 Salvia bowleyana HOM05D002416 ORTHO05D002554 1.5e-20 103.2 75 58.7
BcaB07g30216 Brassica carinata HOM05D006427 ORTHO05D008147 2.0e-20 102.8 77 61.0
Ciclev10017113m.g Citrus clementina HOM05D006427 ORTHO05D008147 2.6e-20 102.4 79 59.5
QL02p069636 Quercus lobata HOM05D006427 ORTHO05D008147 2.6e-20 102.4 78 59.0
BraA02t08479Z Brassica rapa HOM05D006427 ORTHO05D008147 3.4e-20 102.1 77 61.0
PGR119G1648 Punica granatum HOM05D006427 ORTHO05D008147 3.4e-20 102.1 162 42.0
PGR042G0015 Punica granatum HOM05D006427 ORTHO05D008147 4.4e-20 101.7 84 60.7
TWI18G0640 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 4.4e-20 101.7 77 63.6
A02p34710 Brassica napus HOM05D006427 ORTHO05D008147 5.8e-20 101.3 77 61.0
Thhalv10005093m.g Eutrema salsugineum HOM05D006427 ORTHO05D008147 7.6e-20 100.9 78 62.8
Manes.04G092801 Manihot esculenta HOM05D006427 ORTHO05D008147 7.6e-20 100.9 79 60.8
Medtr7g084000 Medicago truncatula HOM05D006427 ORTHO05D008147 1.3e-19 100.1 80 60.0
Duzib187G0815 Durio zibethinus HOM05D006427 ORTHO05D008147 2.2e-19 99.4 79 60.8
SGA_v2.0_scaffold44G16952 Striga asiatica HOM05D006427 ORTHO05D008147 3.8e-19 98.6 76 60.5
Aa31LG2G5820 Aethionema arabicum HOM05D006427 ORTHO05D008147 6.4e-19 97.8 68 66.2
Carub.0005s0476 Capsella rubella HOM05D006427 ORTHO05D008147 1.1e-18 97.1 75 61.3
Os01g0102900 Oryza sativa ssp. japonica HOM05D006427 ORTHO05D008147 1.4e-18 96.7 75 61.3
CARHR147760 Cardamine hirsuta HOM05D006427 ORTHO05D008147 2.4e-18 95.9 72 61.1
CANSAT64G0982 Cannabis sativa HOM05D006427 ORTHO05D008147 3.2e-18 95.5 143 44.8
AL5G15590 Arabidopsis lyrata HOM05D006427 ORTHO05D008147 4.2e-18 95.1 72 61.1
SEGI_30338 Sequoiadendron giganteum HOM05D006427 ORTHO05D008147 5.4e-18 94.7 83 56.6
Atru.chr5.1933 Acer truncatum HOM05D006427 ORTHO05D008147 1.2e-17 93.6 77 57.1
AT3G26740 Arabidopsis thaliana HOM05D006427 ORTHO05D008147 1.2e-17 93.6 137 39.4
GSVIVG01032993001 Vitis vinifera HOM05D006427 ORTHO05D008147 1.6e-17 93.2 139 41.7
CsaV3_3G027740 Cucumis sativus L. HOM05D006427 ORTHO05D008147 6.0e-17 91.3 81 58.0
Atru.chr6.2655 Acer truncatum HOM05D006427 ORTHO05D008147 3.9e-16 88.6 68 58.8
MELO3C014813.2 Cucumis melo HOM05D006427 ORTHO05D008147 1.1e-15 87.0 83 54.2
Zm00001eb138400 Zea mays HOM05D000461 ORTHO05D008147 4.8e-14 81.6 79 44.3
CBR_g20422 Chara braunii HOM05D006427 ORTHO05D008147 1.4e-13 80.1 98 42.9
Mapoly0029s0093 Marchantia polymorpha HOM05D006427 ORTHO05D008147 2.4e-13 79.3 80 52.5
Hund04203 Selenicereus undatus HOM05D006427 ORTHO05D008147 3.1e-13 79.0 70 55.7
Migut.F00015 Erythranthe guttata HOM05D006427 ORTHO05D008147 9.0e-13 77.4 74 52.7
Zm00001eb182180 Zea mays HOM05D006427 ORTHO05D008147 3.4e-12 75.5 76 43.4
Aqoxy5G03161 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 1.7e-11 73.2 69 52.2
FvH4_4g22790 Fragaria vesca HOM05D006427 ORTHO05D008147 3.2e-10 68.9 55 60.0
Zm00001eb127000 Zea mays HOM05D006427 ORTHO05D008147 1.2e-09 67.0 56 51.8
RcHm_v2.0_Chr4g0429011 Rosa chinensis HOM05D006427 ORTHO05D008147 2.1e-09 66.2 55 54.5
Atru.chr9.488 Acer truncatum HOM05D006427 ORTHO05D008147 6.0e-09 64.7 58 55.2
Zm00001eb390880 Zea mays HOM05D001191 ORTHO05D000979 5.1e-08 61.6 70 41.4
COL.COLO4_13367 Corchorus olitorius HOM05D006427 ORTHO05D008147 6.6e-08 61.2 53 54.7
EL10Ac6g13399 Beta vulgaris HOM05D006427 ORTHO05D008147 1.3e-06 57.0 107 33.6
Potri.014G145500 Populus trichocarpa HOM05D006427 ORTHO05D008147 4.8e-06 55.1 57 42.1


User provided reference genes

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