Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g032280 Solanum pennellii HOM05D007216 ORTHO05D009261 3.1e-125 451.8 234 100.0
Solyc09g083360.3 Solanum lycopersicum HOM05D007216 ORTHO05D009261 9.5e-122 440.3 234 98.3
Nitab4.5_0004798g0070 Nicotiana tabacum HOM05D007216 ORTHO05D009261 2.5e-66 256.1 237 61.2
Peaxi162Scf00813g00118 Petunia axillaris HOM05D007216 ORTHO05D009261 3.3e-66 255.8 210 66.7
Nitab4.5_0000525g0160 Nicotiana tabacum HOM05D007216 ORTHO05D009261 3.0e-59 232.6 237 57.8
CAN.G1007.15 Capsicum annuum HOM05D007216 ORTHO05D009261 3.2e-53 212.6 154 77.3
Cc03_g04820 Coffea canephora HOM05D007216 ORTHO05D009261 4.5e-47 192.2 207 53.6
QL06p015626 Quercus lobata HOM05D007216 ORTHO05D009261 7.2e-45 184.9 205 50.7
Prupe.1G030500 Prunus persica HOM05D007216 ORTHO05D009261 2.3e-43 179.9 213 48.8
CSS0019068 Camellia sinensis var. sinensis HOM05D007216 ORTHO05D009261 5.7e-42 175.3 185 50.3
Oeu008788.2 Olea europaea HOM05D007216 ORTHO05D009261 5.7e-42 175.3 207 51.7
Rhsim02G0032900 Rhododendron simsii HOM05D007216 ORTHO05D009261 4.8e-41 172.2 184 51.6
Migut.G00433 Erythranthe guttata HOM05D007216 ORTHO05D009261 6.3e-41 171.8 240 46.7
Cfa008380 Carpinus fangiana HOM05D007216 ORTHO05D009261 1.4e-40 170.6 212 44.8
Duzib052G0756 Durio zibethinus HOM05D007216 ORTHO05D009261 1.4e-40 170.6 209 47.8
MD16G1208400 Malus domestica HOM05D007216 ORTHO05D009261 3.1e-40 169.5 213 47.4
RcHm_v2.0_Chr4g0390311 Rosa chinensis HOM05D007216 ORTHO05D009261 1.2e-39 167.5 212 48.6
MD13G1206900 Malus domestica HOM05D007216 ORTHO05D009261 1.5e-39 167.2 212 46.7
Haze_11299 Corylus avellana HOM05D007216 ORTHO05D009261 2.0e-39 166.8 212 44.8
Haze_11297 Corylus avellana HOM05D007216 ORTHO05D009261 5.9e-39 165.2 212 44.3
Thecc.04G245800 Theobroma cacao HOM05D007216 ORTHO05D009261 2.2e-38 163.3 214 47.2
Duzib151G0820 Durio zibethinus HOM05D007216 ORTHO05D009261 3.8e-38 162.5 228 42.1
QL06p015621 Quercus lobata HOM05D007216 ORTHO05D009261 3.8e-38 162.5 187 49.2
Actinidia05467 Actinidia chinensis HOM05D007216 ORTHO05D009261 6.5e-38 161.8 234 44.9
Duzib151G0028 Durio zibethinus HOM05D007216 ORTHO05D009261 6.5e-38 161.8 228 42.1
COL.COLO4_15786 Corchorus olitorius HOM05D007216 ORTHO05D009261 1.9e-37 160.2 222 45.5
Actinidia08446 Actinidia chinensis HOM05D007216 ORTHO05D009261 4.2e-37 159.1 241 44.8
Cpa.g.sc58.45 Carica papaya HOM05D007216 ORTHO05D009261 9.4e-37 157.9 208 47.6
PGR031G3332 Punica granatum HOM05D007216 ORTHO05D009261 1.6e-36 157.1 177 46.9
CiPaw.02G116600 Carya illinoinensis HOM05D007216 ORTHO05D009261 2.1e-36 156.8 217 44.2
TAR365G0907 Trochodendron aralioides HOM05D007216 ORTHO05D009261 6.1e-36 155.2 231 45.5
CiPaw.01G190600 Carya illinoinensis HOM05D007216 ORTHO05D009261 1.0e-35 154.5 213 43.7
Atru.chr4.2233 Acer truncatum HOM05D007216 ORTHO05D009261 3.0e-35 152.9 207 45.9
Ciclev10005777m.g Citrus clementina HOM05D007216 ORTHO05D009261 5.2e-35 152.1 210 43.8
Eucgr.H00196 Eucalyptus grandis HOM05D007216 ORTHO05D009261 6.7e-35 151.8 176 47.7
DCAR_027275 Daucus carota HOM05D007216 ORTHO05D009261 1.1e-34 151.0 235 42.6
Potri.010G077000 Populus trichocarpa HOM05D007216 ORTHO05D009261 1.1e-34 151.0 223 42.6
Dinv29914 Davidia involucrata HOM05D007216 ORTHO05D009261 1.5e-34 150.6 151 53.0
FvH4_4g02610 Fragaria vesca HOM05D007216 ORTHO05D009261 2.0e-34 150.2 233 42.9
Potri.008G161800 Populus trichocarpa HOM05D007216 ORTHO05D009261 2.6e-34 149.8 227 43.2
MSTRG.4097 Avicennia marina HOM05D007216 ORTHO05D009261 4.4e-34 149.1 235 41.3
Thhalv10003353m.g Eutrema salsugineum HOM05D007216 ORTHO05D009261 7.4e-34 148.3 213 42.7
CsaV3_2G013060 Cucumis sativus L. HOM05D007216 ORTHO05D009261 6.3e-33 145.2 190 42.6
Duzib212G0514 Durio zibethinus HOM05D007216 ORTHO05D009261 1.1e-32 144.4 192 44.8
ClCG06G006720 Citrullus lanatus HOM05D007216 ORTHO05D009261 1.4e-32 144.1 187 43.3
Aa31LG5G3580 Aethionema arabicum HOM05D007216 ORTHO05D009261 2.4e-32 143.3 205 41.5
BraA09t37658Z Brassica rapa HOM05D007216 ORTHO05D009261 7.0e-32 141.7 213 40.8
Gorai.006G246400 Gossypium raimondii HOM05D007216 ORTHO05D009261 9.1e-32 141.4 182 45.6
Sabra10G0031800 Salix brachista HOM05D007216 ORTHO05D009261 9.1e-32 141.4 224 37.9
Gohir.A09G222900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 1.6e-31 140.6 182 45.6
Manes.03G169100 Manihot esculenta HOM05D007216 ORTHO05D009261 1.6e-31 140.6 207 42.0
AL390U10010 Arabidopsis lyrata HOM05D007216 ORTHO05D009261 2.0e-31 140.2 213 43.7
Eucgr.J01563 Eucalyptus grandis HOM05D007216 ORTHO05D009261 2.0e-31 140.2 176 45.5
BcaC04g21907 Brassica carinata HOM05D007216 ORTHO05D009261 5.9e-31 138.7 213 39.9
MELO3C026778.2 Cucumis melo HOM05D007216 ORTHO05D009261 7.7e-31 138.3 204 40.2
Gohir.D09G224900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 1.0e-30 137.9 178 45.5
GSVIVG01018111001 Vitis vinifera HOM05D007216 ORTHO05D009261 2.2e-30 136.7 175 44.6
CARHR006300 Cardamine hirsuta HOM05D007216 ORTHO05D009261 2.9e-30 136.3 181 42.0
Gorai.005G046700 Gossypium raimondii HOM05D007216 ORTHO05D009261 2.9e-30 136.3 184 45.1
Nn3g19525 Nelumbo nucifera HOM05D007216 ORTHO05D009261 2.9e-30 136.3 206 43.7
Sed0021571 Sechium edule HOM05D007216 ORTHO05D009261 2.9e-30 136.3 186 39.8
THA.LOC104827376 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 2.9e-30 136.3 206 40.3
BcaC06g31685 Brassica carinata HOM05D007216 ORTHO05D009261 5.0e-30 135.6 206 40.8
ATR0665G548 Amborella trichopoda HOM05D007216 ORTHO05D009261 1.1e-29 134.4 180 43.9
CANSAT78G2280 Cannabis sativa HOM05D007216 ORTHO05D009261 1.1e-29 134.4 242 40.1
Gohir.D02G042400 Gossypium hirsutum HOM05D007216 ORTHO05D009261 1.5e-29 134.0 184 45.1
SpUn0744_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 1.5e-29 134.0 188 41.5
A06p47770 Brassica napus HOM05D007216 ORTHO05D009261 7.2e-29 131.7 206 41.3
FAN12G1817 Fragaria x ananassa HOM05D007216 ORTHO05D009261 7.2e-29 131.7 214 41.6
THA.LOC104801097 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 1.6e-28 130.6 245 37.1
Gohir.A02G035500 Gossypium hirsutum HOM05D007216 ORTHO05D009261 2.1e-28 130.2 184 43.5
BcaC06g34638 Brassica carinata HOM05D007216 ORTHO05D009261 2.7e-28 129.8 206 40.8
C07p26230 Brassica napus HOM05D007216 ORTHO05D009261 2.7e-28 129.8 206 40.8
BolC7t43151H Brassica oleracea HOM05D007216 ORTHO05D009261 2.7e-28 129.8 206 40.8
C09p25930 Brassica napus HOM05D007216 ORTHO05D009261 3.6e-28 129.4 195 40.5
BolC9t55498H Brassica oleracea HOM05D007216 ORTHO05D009261 3.6e-28 129.4 195 40.5
Medtr1g040435 Medicago truncatula HOM05D007216 ORTHO05D009261 3.6e-28 129.4 211 39.8
A09p20520 Brassica napus HOM05D007216 ORTHO05D009261 4.7e-28 129.0 220 39.5
Sed0000846 Sechium edule HOM05D007216 ORTHO05D009261 4.7e-28 129.0 209 38.3
Carub.0008s0499 Capsella rubella HOM05D007216 ORTHO05D009261 8.0e-28 128.3 209 41.1
AT5G43650 Arabidopsis thaliana HOM05D007216 ORTHO05D009261 1.4e-27 127.5 164 45.1
Nn1g02593 Nelumbo nucifera HOM05D007216 ORTHO05D009261 1.4e-27 127.5 229 38.9
Sed0019243 Sechium edule HOM05D007216 ORTHO05D009261 1.4e-27 127.5 183 39.9
DCAR_027276 Daucus carota HOM05D007216 ORTHO05D009261 2.3e-27 126.7 217 37.8
TWI73G0753 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 3.0e-27 126.3 219 37.9
TAR636G2640 Trochodendron aralioides HOM05D007216 ORTHO05D009261 5.2e-27 125.6 189 45.0
Sabra08G0123600 Salix brachista HOM05D007216 ORTHO05D009261 6.7e-27 125.2 210 40.0
BcaB07g31004 Brassica carinata HOM05D007216 ORTHO05D009261 1.2e-26 124.4 213 38.0
BraA06t27645Z Brassica rapa HOM05D007216 ORTHO05D009261 4.4e-26 122.5 194 40.7
Psat6g102240 Pisum sativum HOM05D007216 ORTHO05D009261 6.3e-25 118.6 232 34.9
TWI09G1088 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 8.2e-25 118.2 225 38.2
Dinv44631 Davidia involucrata HOM05D007216 ORTHO05D009261 1.2e-23 114.4 114 54.4
Glyma.02G000800 Glycine max HOM05D007216 ORTHO05D009261 2.5e-21 106.7 182 36.3
Lalb_Chr03g0037861 Lupinus albus HOM05D007216 ORTHO05D009261 2.7e-20 103.2 185 39.5
TPR.G22479 Trifolium pratense HOM05D007216 ORTHO05D009261 4.7e-20 102.4 205 34.6
SpUn0429_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 3.0e-19 99.8 188 34.6
Hma1.2p1_0893F.1_g233480 Hydrangea macrophylla HOM05D007216 ORTHO05D009261 4.0e-19 99.4 107 50.5
Sc13g0004990 Simmondsia chinensis HOM05D007216 ORTHO05D009261 5.2e-19 99.0 218 34.4
Lj6C656T7 Lonicera japonica HOM05D007216 ORTHO05D009261 6.8e-19 98.6 218 35.3
Os03g0741100 Oryza sativa ssp. japonica HOM05D007216 ORTHO05D009261 1.4e-16 90.9 228 31.6
Phvul.007G280700 Phaseolus vulgaris HOM05D007216 ORTHO05D009261 1.6e-15 87.4 152 34.9
Zm00001eb056760 Zea mays HOM05D007216 ORTHO05D009261 3.8e-14 82.8 155 34.2
Aqoxy5G00327 Aquilegia oxysepala HOM05D007216 ORTHO05D009261 5.7e-10 68.9 120 37.5
HPP92_023468 Vanilla planifolia HOM05D007216 ORTHO05D009261 5.9e-07 58.9 180 29.4
HPP92_023463 Vanilla planifolia HOM05D007216 ORTHO05D009261 2.3e-06 57.0 182 29.1
HPP92_027840 Vanilla planifolia HOM05D007216 ORTHO05D009261 3.8e-06 56.2 193 24.9


User provided reference genes

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