Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g019310 Solanum pennellii HOM05D002095 ORTHO05D002058 5.7e-68 260.8 130 100.0
PGSC0003DMG400003284 Solanum tuberosum HOM05D002095 ORTHO05D002058 3.7e-35 151.8 101 77.2
PGSC0003DMG400025671 Solanum tuberosum HOM05D002095 ORTHO05D002058 8.6e-32 140.6 99 72.7
PGSC0003DMG400025672 Solanum tuberosum HOM05D002095 ORTHO05D002058 4.9e-27 124.8 88 70.5
Sopen09g001130 Solanum pennellii HOM05D002095 ORTHO05D002058 1.7e-24 116.3 99 63.6
Sopen09g001140 Solanum pennellii HOM05D002095 ORTHO05D002058 6.6e-24 114.4 170 44.7
Solyc05g054080.3 Solanum lycopersicum HOM05D002095 ORTHO05D002058 1.9e-10 69.7 101 43.6
Sopen05g032570 Solanum pennellii HOM05D002095 ORTHO05D002058 1.9e-10 69.7 101 43.6
PGSC0003DMG400008462 Solanum tuberosum HOM05D002095 ORTHO05D002058 1.9e-10 69.7 101 43.6
CAN.G208.17 Capsicum annuum HOM05D002095 ORTHO05D002058 7.1e-10 67.8 99 40.4
CAN.G2440.1 Capsicum annuum HOM05D002095 ORTHO05D002058 7.1e-10 67.8 99 40.4
Nitab4.5_0000901g0010 Nicotiana tabacum HOM05D002095 ORTHO05D002058 6.0e-09 64.7 97 48.5
Actinidia26859 Actinidia chinensis HOM05D002095 ORTHO05D002058 7.8e-09 64.3 104 39.4
Nitab4.5_0000625g0060 Nicotiana tabacum HOM05D002095 ORTHO05D002058 1.0e-08 63.9 97 47.4
Rhsim13G0145500 Rhododendron simsii HOM05D002095 ORTHO05D002058 2.3e-08 62.8 103 36.9
RhsimUnG0110400 Rhododendron simsii HOM05D002095 ORTHO05D002058 2.3e-08 62.8 103 36.9
CAN.G1039.12 Capsicum annuum HOM05D002095 ORTHO05D002058 8.7e-08 60.8 126 31.7
Duzib235G1530 Durio zibethinus HOM05D002095 ORTHO05D002058 8.7e-08 60.8 99 40.4
Duzib160G0921 Durio zibethinus HOM05D002095 ORTHO05D002058 2.5e-07 59.3 99 38.4
Solyc10g083470.2 Solanum lycopersicum HOM05D002095 ORTHO05D002058 2.5e-07 59.3 88 40.9
Thecc.06G234100 Theobroma cacao HOM05D002095 ORTHO05D002058 2.5e-07 59.3 99 39.4
Nitab4.5_0000699g0090 Nicotiana tabacum HOM05D002095 ORTHO05D002058 3.3e-07 58.9 87 35.6
COL.COLO4_31893 Corchorus olitorius HOM05D002095 ORTHO05D002058 4.3e-07 58.5 99 35.4
Duzib192G0198 Durio zibethinus HOM05D002095 ORTHO05D002058 4.3e-07 58.5 99 38.4
Glyma.07G265600 Glycine max HOM05D002095 ORTHO05D002058 1.6e-06 56.6 99 34.3
Glyma.07G265700 Glycine max HOM05D002095 ORTHO05D002058 1.6e-06 56.6 99 34.3
Glyma.17G008400 Glycine max HOM05D002095 ORTHO05D002058 1.6e-06 56.6 99 34.3
PGSC0003DMG400028257 Solanum tuberosum HOM05D002095 ORTHO05D002058 1.6e-06 56.6 99 35.4
Sopen10g032940 Solanum pennellii HOM05D002095 ORTHO05D002058 2.1e-06 56.2 88 39.8
vmacro03639 Vaccinium macrocarpon HOM05D002095 ORTHO05D002058 2.8e-06 55.8 61 42.6
vmacro23370 Vaccinium macrocarpon HOM05D002095 ORTHO05D002058 2.8e-06 55.8 61 42.6
CSS0046522 Camellia sinensis var. sinensis HOM05D002095 ORTHO05D002058 3.6e-06 55.5 99 36.4
Cpa.g.sc3792.1 Carica papaya HOM05D002095 ORTHO05D002058 3.6e-06 55.5 100 34.0
Nitab4.5_0009725g0010 Nicotiana tabacum HOM05D002095 ORTHO05D002058 3.6e-06 55.5 85 34.1
Nitab4.5_0027831g0010 Nicotiana tabacum HOM05D002095 ORTHO05D002058 3.6e-06 55.5 85 34.1
Phvul.003G084200 Phaseolus vulgaris HOM05D002095 ORTHO05D002058 3.6e-06 55.5 99 32.3
CSS0017522 Camellia sinensis var. sinensis HOM05D002095 ORTHO05D002058 4.8e-06 55.1 99 37.4
CAN.G208.15 Capsicum annuum HOM05D002095 ORTHO05D002058 4.8e-06 55.1 88 36.4
CAN.G449.14 Capsicum annuum HOM05D002095 ORTHO05D002058 4.8e-06 55.1 116 35.3
PGSC0003DMG400041262 Solanum tuberosum HOM05D002095 ORTHO05D394923 4.8e-06 55.1 32 75.0


User provided reference genes

Program Settings