Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g015040 Solanum pennellii HOM05D008663 ORTHO05D011127 1.2e-169 599.7 298 100.0
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-77 294.3 289 59.9
Sopen10g010510 Solanum pennellii HOM05D008663 ORTHO05D011127 1.0e-48 198.0 159 64.8
Sopen10g007730 Solanum pennellii HOM05D000003 ORTHO05D000004 2.3e-48 196.8 196 56.1
Sopen03g010900 Solanum pennellii HOM05D000155 ORTHO05D000022 3.0e-48 196.4 146 73.3
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 5.2e-48 195.7 311 41.2
Sopen05g018060 Solanum pennellii HOM05D008663 ORTHO05D011127 7.5e-47 191.8 121 81.8
Sopen09g014970 Solanum pennellii HOM05D008663 ORTHO05D011127 2.4e-45 186.8 121 77.7
Sopen11g013390 Solanum pennellii HOM05D000024 ORTHO05D000007 1.6e-44 184.1 191 56.5
Sopen09g009790 Solanum pennellii HOM05D000155 ORTHO05D000022 2.0e-44 183.7 144 63.9
Sopen08g015490 Solanum pennellii HOM05D000003 ORTHO05D000022 4.5e-44 182.6 247 47.4
Sopen03g011820 Solanum pennellii HOM05D000003 ORTHO05D000004 8.0e-41 171.8 147 59.9
Sopen05g017840 Solanum pennellii HOM05D008663 ORTHO05D011127 3.4e-39 166.4 426 32.9
Sopen10g010410 Solanum pennellii HOM05D000070 ORTHO05D011127 5.4e-37 159.1 117 71.8
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 4.7e-33 146.0 92 75.0
Sopen11g007990 Solanum pennellii HOM05D000155 ORTHO05D000022 1.1e-29 134.8 196 43.4
Sopen09g015050 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-27 127.5 72 81.9
Sopen05g017830 Solanum pennellii HOM05D000004 ORTHO05D000022 1.5e-26 124.4 97 66.0
Sopen11g012710 Solanum pennellii HOM05D000014 ORTHO05D000016 3.3e-26 123.2 73 76.7
Sopen10g010450 Solanum pennellii HOM05D000003 ORTHO05D000004 9.5e-26 121.7 280 31.8
Sopen09g018560 Solanum pennellii HOM05D008966 ORTHO05D023159 1.6e-25 120.9 164 47.0
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 8.0e-25 118.6 72 75.0
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 1.0e-24 118.2 92 63.0
Sopen11g012290 Solanum pennellii HOM05D000003 ORTHO05D000006 3.1e-24 116.7 66 81.8
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 5.2e-24 115.9 72 72.2
Sopen11g008060 Solanum pennellii HOM05D000003 ORTHO05D000004 5.2e-24 115.9 72 77.8
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 1.5e-23 114.4 72 75.0
Sopen02g009750 Solanum pennellii HOM05D000003 ORTHO05D026164 1.5e-23 114.4 72 72.2
Sopen09g022950 Solanum pennellii HOM05D000003 ORTHO05D000004 2.0e-23 114.0 72 73.6
Sopen10g011030 Solanum pennellii HOM05D000004 ORTHO05D026164 3.4e-23 113.2 72 75.0
Sopen10g010590 Solanum pennellii HOM05D008663 ORTHO05D011127 9.8e-23 111.7 77 72.7
PGSC0003DMG400046872 Solanum tuberosum HOM05D000003 ORTHO05D000022 9.8e-23 111.7 153 45.8
Sopen07g013730 Solanum pennellii HOM05D000003 ORTHO05D000004 2.2e-22 110.5 72 70.8
Sopen08g015180 Solanum pennellii HOM05D000003 ORTHO05D000004 4.9e-22 109.4 80 62.5
Sopen11g007860 Solanum pennellii HOM05D008663 ORTHO05D011127 6.4e-22 109.0 79 68.4
Sopen03g008140 Solanum pennellii HOM05D000014 ORTHO05D000016 8.3e-22 108.6 95 58.9
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-21 108.2 72 69.4
Sopen11g007980 Solanum pennellii HOM05D000014 ORTHO05D000016 1.1e-21 108.2 274 35.8
Sopen05g012770 Solanum pennellii HOM05D000155 ORTHO05D000022 5.4e-21 105.9 89 62.9
PGSC0003DMG400040298 Solanum tuberosum HOM05D008663 ORTHO05D011127 5.4e-21 105.9 80 63.8
PGSC0003DMG400041565 Solanum tuberosum HOM05D008966 ORTHO05D011465 7.0e-21 105.5 89 58.4
Sopen09g017040 Solanum pennellii HOM05D000003 ORTHO05D000004 2.0e-20 104.0 165 41.8
Sopen11g008070 Solanum pennellii HOM05D008966 ORTHO05D011127 2.0e-20 104.0 73 74.0
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 6.0e-20 102.4 160 40.6
Sopen11g013340 Solanum pennellii HOM05D000024 ORTHO05D000007 1.3e-19 101.3 77 70.1
Sopen11g015660 Solanum pennellii HOM05D000003 ORTHO05D023159 5.0e-19 99.4 79 67.1
Sopen11g007960 Solanum pennellii HOM05D008562 ORTHO05D011465 1.5e-18 97.8 121 44.6
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 2.5e-18 97.1 181 39.8
Sopen11g008120 Solanum pennellii HOM05D000014 ORTHO05D000016 5.6e-18 95.9 72 66.7
Sopen11g007910 Solanum pennellii HOM05D017709 ORTHO05D026164 2.8e-17 93.6 107 48.6
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 3.6e-17 93.2 79 60.8
PGSC0003DMG400046732 Solanum tuberosum HOM05D008663 ORTHO05D011127 3.6e-17 93.2 83 57.8
PGSC0003DMG400038562 Solanum tuberosum HOM05D008663 ORTHO05D011127 8.1e-17 92.0 80 61.2
PGSC0003DMG400038309 Solanum tuberosum HOM05D008663 ORTHO05D011127 1.1e-16 91.7 70 65.7
PGSC0003DMG400046009 Solanum tuberosum HOM05D008663 ORTHO05D011127 1.1e-16 91.7 91 53.8
Sopen05g017790 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-16 90.9 171 40.4
Sopen11g007970 Solanum pennellii HOM05D000014 ORTHO05D000016 4.0e-16 89.7 136 45.6
Sopen05g009430 Solanum pennellii HOM05D008663 ORTHO05D011127 5.2e-16 89.4 164 37.2
PGSC0003DMG400036048 Solanum tuberosum HOM05D008663 ORTHO05D011127 1.2e-15 88.2 80 58.8
PGSC0003DMG400038722 Solanum tuberosum HOM05D008663 ORTHO05D011127 3.4e-15 86.7 92 51.1
Sopen10g010480 Solanum pennellii HOM05D000155 ORTHO05D000022 5.8e-15 85.9 74 64.9
Sopen08g015220 Solanum pennellii HOM05D000024 ORTHO05D000007 9.8e-15 85.1 320 29.7
Sopen11g007940 Solanum pennellii HOM05D017709 ORTHO05D026164 1.3e-14 84.7 56 66.1
Sopen03g029130 Solanum pennellii HOM05D008663 ORTHO05D011127 1.7e-14 84.3 79 57.0
Sopen01g023890 Solanum pennellii HOM05D000003 ORTHO05D015569 2.2e-14 84.0 76 56.6
Sopen09g016340 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-14 83.6 72 50.0
PGSC0003DMG400046328 Solanum tuberosum HOM05D008663 ORTHO05D011127 2.9e-14 83.6 82 56.1
PGSC0003DMG400046727 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.7e-14 83.2 63 61.9
Sopen05g020310 Solanum pennellii HOM05D008966 ORTHO05D011127 6.4e-14 82.4 52 75.0
PGSC0003DMG400045218 Solanum tuberosum HOM05D008966 ORTHO05D011127 8.3e-14 82.0 74 58.1
Sopen11g018190 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-13 81.6 72 52.8
Sopen03g010960 Solanum pennellii HOM05D008966 ORTHO05D011127 1.4e-13 81.3 85 48.2
PGSC0003DMG400044128 Solanum tuberosum HOM05D008966 ORTHO05D011465 1.4e-13 81.3 82 53.7
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-13 80.9 72 47.2
Sopen01g019410 Solanum pennellii HOM05D000003 ORTHO05D000006 1.9e-13 80.9 103 45.6
Sopen10g010990 Solanum pennellii HOM05D000024 ORTHO05D000007 1.9e-13 80.9 56 67.9
Sopen10g008910 Solanum pennellii HOM05D009384 ORTHO05D011633 2.4e-13 80.5 95 48.4
Sopen11g002790 Solanum pennellii HOM05D000024 ORTHO05D000007 2.4e-13 80.5 79 55.7
Sopen05g009840 Solanum pennellii HOM05D015646 ORTHO05D017131 3.2e-13 80.1 197 31.5
Sopen06g013950 Solanum pennellii HOM05D000003 ORTHO05D000004 4.1e-13 79.7 79 48.1
Sopen09g028340 Solanum pennellii HOM05D000003 ORTHO05D000006 4.1e-13 79.7 72 51.4
Sopen00g001110 Solanum pennellii HOM05D000003 ORTHO05D000007 5.4e-13 79.3 72 47.2
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 5.4e-13 79.3 72 45.8
Sopen06g013970 Solanum pennellii HOM05D000003 ORTHO05D000004 5.4e-13 79.3 72 48.6
Sopen08g015270 Solanum pennellii HOM05D000003 ORTHO05D009932 5.4e-13 79.3 84 52.4
Sopen01g016010 Solanum pennellii HOM05D000003 ORTHO05D000022 7.1e-13 79.0 80 47.5
Sopen05g024990 Solanum pennellii HOM05D000003 ORTHO05D000006 7.1e-13 79.0 72 48.6
Sopen11g013960 Solanum pennellii HOM05D000003 ORTHO05D000006 9.2e-13 78.6 72 47.2
Sopen00g007260 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-12 77.8 72 44.4
PGSC0003DMG400043989 Solanum tuberosum HOM05D008966 ORTHO05D011465 2.7e-12 77.0 78 52.6
Sopen11g007870 Solanum pennellii HOM05D000155 ORTHO05D000007 3.5e-12 76.6 84 54.8
PGSC0003DMG400041972 Solanum tuberosum HOM05D008663 ORTHO05D011127 3.5e-12 76.6 81 55.6
Sopen08g015250 Solanum pennellii HOM05D000003 ORTHO05D000006 4.6e-12 76.3 71 46.5
Sopen04g016850 Solanum pennellii HOM05D000024 ORTHO05D000006 6.0e-12 75.9 144 34.0
Sopen06g007150 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-11 75.1 91 47.3
PGSC0003DMG400043098 Solanum tuberosum HOM05D008966 ORTHO05D011465 1.3e-11 74.7 78 53.8
Sopen07g013600 Solanum pennellii HOM05D008966 ORTHO05D011127 2.3e-11 73.9 64 54.7
Sopen10g026030 Solanum pennellii HOM05D000003 ORTHO05D000006 2.3e-11 73.9 72 43.1
Sopen08g017350 Solanum pennellii HOM05D000047 ORTHO05D000589 3.9e-11 73.2 72 41.7
Sopen02g002350 Solanum pennellii HOM05D000014 ORTHO05D000016 5.1e-11 72.8 50 72.0
Sopen09g015010 Solanum pennellii HOM05D000003 ORTHO05D000022 6.6e-11 72.4 43 76.7
Sopen00g014260 Solanum pennellii HOM05D000003 ORTHO05D011465 8.6e-11 72.0 43 72.1
Sopen03g013510 Solanum pennellii HOM05D000014 ORTHO05D000016 8.6e-11 72.0 127 35.4
PGSC0003DMG400038477 Solanum tuberosum HOM05D008966 ORTHO05D011465 1.5e-10 71.2 44 75.0
PGSC0003DMG400037470 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.9e-10 70.9 86 46.5
Sopen10g015360 Solanum pennellii HOM05D000155 ORTHO05D000022 2.5e-10 70.5 175 33.1
Sopen03g012480 Solanum pennellii HOM05D000014 ORTHO05D000016 3.3e-10 70.1 82 43.9
Sopen03g010940 Solanum pennellii HOM05D000004 ORTHO05D000002 4.3e-10 69.7 63 54.0
PGSC0003DMG400041954 Solanum tuberosum HOM05D010618 ORTHO05D000007 4.3e-10 69.7 44 72.7
Sopen04g015570 Solanum pennellii HOM05D000024 ORTHO05D000007 5.6e-10 69.3 48 62.5
Sopen09g030960 Solanum pennellii HOM05D000003 ORTHO05D000004 7.3e-10 68.9 63 44.4
Sopen09g015020 Solanum pennellii HOM05D000024 ORTHO05D000007 9.5e-10 68.6 45 80.0
Aqoxy7G02921 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.2e-09 68.2 71 39.4
Aqoxy2G01855 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.6e-09 67.8 73 38.4
Aqoxy5G00983 Aquilegia oxysepala HOM05D000003 ORTHO05D008335 2.1e-09 67.4 71 39.4
PGSC0003DMG400035296 Solanum tuberosum HOM05D008663 ORTHO05D011127 6.2e-09 65.9 79 50.6
PSO447G0388 Papaver somniferum HOM05D000003 ORTHO05D000004 8.1e-09 65.5 79 38.0
Sopen06g016720 Solanum pennellii HOM05D000024 ORTHO05D017131 1.8e-08 64.3 57 47.4
Aqoxy1G02954 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 5.2e-08 62.8 69 39.1
Sopen00g009370 Solanum pennellii HOM05D000024 ORTHO05D000006 6.8e-08 62.4 61 41.0
PGSC0003DMG400040103 Solanum tuberosum HOM05D000003 ORTHO05D000022 6.8e-08 62.4 68 45.6
PSO675G9027 Papaver somniferum HOM05D000003 ORTHO05D000006 8.9e-08 62.0 70 42.9
Aqoxy2G01850 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.5e-07 61.2 71 32.4
Aqoxy7G03593 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.5e-07 61.2 69 39.1
PSO832G0038 Papaver somniferum HOM05D000003 ORTHO05D000004 1.5e-07 61.2 68 38.2
PGSC0003DMG400038425 Solanum tuberosum HOM05D008663 ORTHO05D017125 1.5e-07 61.2 79 48.1
Aqoxy2G02926 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.0e-07 60.8 73 35.6
PGSC0003DMG400042088 Solanum tuberosum HOM05D000024 ORTHO05D011127 2.0e-07 60.8 55 60.0
PSO541G6230 Papaver somniferum HOM05D000003 ORTHO05D000004 3.4e-07 60.1 72 33.3
SHI37465 Sapria himalayana HOM05D000003 ORTHO05D000006 3.4e-07 60.1 69 43.5
PSO170G5907 Papaver somniferum HOM05D000003 ORTHO05D000004 4.4e-07 59.7 73 42.5
Sopen02g008690 Solanum pennellii HOM05D009384 ORTHO05D011465 4.4e-07 59.7 36 69.4
Sopen05g017930 Solanum pennellii HOM05D008966 ORTHO05D023159 4.4e-07 59.7 71 43.7
TAR295G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000006 4.4e-07 59.7 71 33.8
PSO339G1117 Papaver somniferum HOM05D000003 ORTHO05D000006 5.8e-07 59.3 73 35.6
PSO339G3896 Papaver somniferum HOM05D000003 ORTHO05D000006 5.8e-07 59.3 69 40.6
Sopen05g012820 Solanum pennellii HOM05D000004 ORTHO05D000002 5.8e-07 59.3 48 58.3
PGSC0003DMG400036686 Solanum tuberosum HOM05D008663 ORTHO05D011127 5.8e-07 59.3 79 45.6
PGSC0003DMG400042100 Solanum tuberosum HOM05D008663 ORTHO05D011127 5.8e-07 59.3 79 48.1
Aqoxy5G02681 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.6e-07 58.9 73 32.9
SHI54997 Sapria himalayana HOM05D000024 ORTHO05D000006 7.6e-07 58.9 69 43.5
PGSC0003DMG400045302 Solanum tuberosum HOM05D008663 ORTHO05D011127 9.9e-07 58.5 76 46.1
MBI07_g38406_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.3e-06 58.2 72 36.1
PSO170G6301 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-06 58.2 73 37.0
PSO339G2828 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-06 58.2 72 34.7
PSO384G1926 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-06 58.2 99 31.3
RcHm_v2.0_Chr2g0140031 Rosa chinensis HOM05D000003 ORTHO05D000004 1.3e-06 58.2 64 37.5
Aa31sc914G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.2e-06 57.4 70 38.6
PSO478G2477 Papaver somniferum HOM05D000003 ORTHO05D000004 2.2e-06 57.4 72 38.9
PGSC0003DMG400046069 Solanum tuberosum HOM05D008966 ORTHO05D011127 2.2e-06 57.4 48 58.3
PSO017G2049 Papaver somniferum HOM05D000003 ORTHO05D000004 2.9e-06 57.0 122 27.9
PSO017G4701 Papaver somniferum HOM05D000003 ORTHO05D000004 2.9e-06 57.0 69 36.2
PSO063G2318 Papaver somniferum HOM05D000003 ORTHO05D000004 2.9e-06 57.0 72 33.3
PSO210G3569 Papaver somniferum HOM05D000003 ORTHO05D000004 2.9e-06 57.0 66 40.9
Prupe.3G120300 Prunus persica HOM05D000003 ORTHO05D000004 2.9e-06 57.0 73 39.7
PGSC0003DMG400029819 Solanum tuberosum HOM05D000003 ORTHO05D000006 2.9e-06 57.0 72 36.1
PGSC0003DMG400036497 Solanum tuberosum HOM05D008663 ORTHO05D011127 2.9e-06 57.0 78 47.4
PGSC0003DMG400041265 Solanum tuberosum HOM05D008663 ORTHO05D000007 2.9e-06 57.0 78 46.2
TAR584G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000006 2.9e-06 57.0 73 37.0
Aqoxy6G02677 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.8e-06 56.6 72 36.1
PSO591G0259 Papaver somniferum HOM05D000003 ORTHO05D000004 3.8e-06 56.6 72 34.7
PSO675G6252 Papaver somniferum HOM05D000003 ORTHO05D000004 3.8e-06 56.6 68 35.3
PGSC0003DMG400045205 Solanum tuberosum HOM05D008663 ORTHO05D017125 3.8e-06 56.6 71 47.9
PGSC0003DMG400045462 Solanum tuberosum HOM05D008663 ORTHO05D017125 3.8e-06 56.6 74 45.9
Aqoxy5G03276 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.9e-06 56.2 72 34.7
MBI07_g42490_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.9e-06 56.2 70 37.1
PSO017G5179 Papaver somniferum HOM05D000003 ORTHO05D000004 4.9e-06 56.2 73 35.6
PSO339G5043 Papaver somniferum HOM05D000003 ORTHO05D000004 4.9e-06 56.2 73 34.2
PSO567G0001 Papaver somniferum HOM05D000003 ORTHO05D000004 4.9e-06 56.2 80 35.0
Sopen04g007290 Solanum pennellii HOM05D000003 ORTHO05D000006 4.9e-06 56.2 70 42.9
Aqoxy2G00512 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 6.4e-06 55.8 72 34.7
PSO170G3550 Papaver somniferum HOM05D000003 ORTHO05D000006 6.4e-06 55.8 94 33.0
PSO475G0001 Papaver somniferum HOM05D000003 ORTHO05D000004 6.4e-06 55.8 80 35.0
PSO675G1323 Papaver somniferum HOM05D000003 ORTHO05D000004 6.4e-06 55.8 72 37.5
Aa31sc688G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.4e-06 55.5 71 39.4
PSO013G0007 Papaver somniferum HOM05D000003 ORTHO05D000004 8.4e-06 55.5 72 33.3
PSO017G1213 Papaver somniferum HOM05D000003 ORTHO05D000004 8.4e-06 55.5 80 35.0
PSO063G2554 Papaver somniferum HOM05D000003 ORTHO05D000004 8.4e-06 55.5 99 30.3
PSO210G0037 Papaver somniferum HOM05D000003 ORTHO05D000004 8.4e-06 55.5 62 38.7
PSO210G5260 Papaver somniferum HOM05D000003 ORTHO05D000004 8.4e-06 55.5 80 33.8
PSO339G6097 Papaver somniferum HOM05D000003 ORTHO05D000006 8.4e-06 55.5 80 36.2
PSO478G2052 Papaver somniferum HOM05D000003 ORTHO05D000004 8.4e-06 55.5 72 37.5
Prupe.5G070700 Prunus persica HOM05D000003 ORTHO05D000004 8.4e-06 55.5 73 38.4
Sopen02g005190 Solanum pennellii HOM05D000004 ORTHO05D000004 8.4e-06 55.5 38 71.1
PGSC0003DMG400035720 Solanum tuberosum HOM05D026012 ORTHO05D000006 8.4e-06 55.5 87 31.0
PGSC0003DMG400043408 Solanum tuberosum HOM05D008663 ORTHO05D011127 8.4e-06 55.5 79 45.6
PGSC0003DMG402031434 Solanum tuberosum HOM05D000003 ORTHO05D000004 8.4e-06 55.5 71 38.0


User provided reference genes

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