Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g014970 Solanum pennellii HOM05D008663 ORTHO05D011127 3.8e-117 424.9 215 100.0
Sopen05g018060 Solanum pennellii HOM05D008663 ORTHO05D011127 7.0e-79 297.7 196 77.6
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 1.5e-60 236.9 204 64.2
Sopen09g017040 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-51 206.8 257 49.4
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 2.1e-51 206.5 206 58.3
Sopen09g015040 Solanum pennellii HOM05D008663 ORTHO05D011127 1.7e-45 186.8 121 77.7
Sopen05g017840 Solanum pennellii HOM05D008663 ORTHO05D011127 1.6e-43 180.3 361 37.1
Sopen10g007730 Solanum pennellii HOM05D000003 ORTHO05D000004 8.9e-34 147.9 170 53.5
PGSC0003DMG400041565 Solanum tuberosum HOM05D008966 ORTHO05D011465 3.4e-33 146.0 132 56.8
Sopen11g007990 Solanum pennellii HOM05D000155 ORTHO05D000022 6.4e-32 141.7 211 42.2
Sopen03g029130 Solanum pennellii HOM05D008663 ORTHO05D011127 1.1e-31 141.0 122 59.8
Sopen03g010900 Solanum pennellii HOM05D000155 ORTHO05D000022 4.1e-31 139.0 186 50.5
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 1.5e-28 130.6 117 58.1
PGSC0003DMG400046009 Solanum tuberosum HOM05D008663 ORTHO05D011127 4.7e-27 125.6 134 52.2
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 3.1e-26 122.9 201 41.3
Sopen11g018190 Solanum pennellii HOM05D000003 ORTHO05D000004 2.6e-25 119.8 84 73.8
Sopen10g010590 Solanum pennellii HOM05D008663 ORTHO05D011127 7.6e-25 118.2 182 40.7
PGSC0003DMG400036048 Solanum tuberosum HOM05D008663 ORTHO05D011127 7.6e-25 118.2 123 55.3
Sopen10g008910 Solanum pennellii HOM05D009384 ORTHO05D011633 9.9e-25 117.9 84 72.6
Sopen01g019410 Solanum pennellii HOM05D000003 ORTHO05D000006 1.7e-24 117.1 104 63.5
PGSC0003DMG400040298 Solanum tuberosum HOM05D008663 ORTHO05D011127 2.2e-24 116.7 106 54.7
Sopen07g013730 Solanum pennellii HOM05D000003 ORTHO05D000004 3.8e-24 115.9 83 65.1
Sopen11g012710 Solanum pennellii HOM05D000014 ORTHO05D000016 3.8e-24 115.9 90 66.7
Sopen11g015660 Solanum pennellii HOM05D000003 ORTHO05D023159 6.4e-24 115.2 81 71.6
Sopen06g007150 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-23 114.4 84 70.2
PGSC0003DMG400038722 Solanum tuberosum HOM05D008663 ORTHO05D011127 1.1e-23 114.4 133 48.1
Sopen08g015220 Solanum pennellii HOM05D000024 ORTHO05D000007 4.2e-23 112.5 86 68.6
PGSC0003DMG400046328 Solanum tuberosum HOM05D008663 ORTHO05D011127 5.4e-23 112.1 123 53.7
Sopen00g014260 Solanum pennellii HOM05D000003 ORTHO05D011465 1.6e-22 110.5 81 66.7
Sopen08g015270 Solanum pennellii HOM05D000003 ORTHO05D009932 1.6e-22 110.5 86 68.6
Sopen09g015010 Solanum pennellii HOM05D000003 ORTHO05D000022 3.5e-22 109.4 86 61.6
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 4.6e-22 109.0 93 60.2
Sopen02g009750 Solanum pennellii HOM05D000003 ORTHO05D026164 6.0e-22 108.6 105 53.3
Sopen11g002790 Solanum pennellii HOM05D000024 ORTHO05D000007 7.8e-22 108.2 77 64.9
Sopen11g007970 Solanum pennellii HOM05D000014 ORTHO05D000016 7.8e-22 108.2 84 67.9
Sopen05g009430 Solanum pennellii HOM05D008663 ORTHO05D011127 1.0e-21 107.8 94 58.5
PGSC0003DMG400044128 Solanum tuberosum HOM05D008966 ORTHO05D011465 1.0e-21 107.8 123 52.0
Sopen09g022950 Solanum pennellii HOM05D000003 ORTHO05D000004 5.1e-21 105.5 95 52.6
Sopen11g007870 Solanum pennellii HOM05D000155 ORTHO05D000007 6.6e-21 105.1 90 64.4
Sopen10g015360 Solanum pennellii HOM05D000155 ORTHO05D000022 1.1e-20 104.4 153 43.8
Sopen09g018560 Solanum pennellii HOM05D008966 ORTHO05D023159 1.5e-20 104.0 80 67.5
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-20 103.6 79 63.3
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-20 103.6 91 56.0
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 1.9e-20 103.6 79 63.3
Sopen05g020310 Solanum pennellii HOM05D008966 ORTHO05D011127 2.5e-20 103.2 90 63.3
PGSC0003DMG400043098 Solanum tuberosum HOM05D008966 ORTHO05D011465 2.5e-20 103.2 94 57.4
Sopen03g008140 Solanum pennellii HOM05D000014 ORTHO05D000016 5.6e-20 102.1 78 66.7
Sopen04g015570 Solanum pennellii HOM05D000024 ORTHO05D000007 5.6e-20 102.1 89 60.7
Sopen02g008690 Solanum pennellii HOM05D009384 ORTHO05D011465 1.6e-19 100.5 79 64.6
PGSC0003DMG400042088 Solanum tuberosum HOM05D000024 ORTHO05D011127 1.6e-19 100.5 96 57.3
PGSC0003DMG400041954 Solanum tuberosum HOM05D010618 ORTHO05D000007 3.6e-19 99.4 89 58.4
Sopen11g007860 Solanum pennellii HOM05D008663 ORTHO05D011127 4.8e-19 99.0 79 64.6
PGSC0003DMG400046732 Solanum tuberosum HOM05D008663 ORTHO05D011127 4.8e-19 99.0 83 57.8
Sopen05g012770 Solanum pennellii HOM05D000155 ORTHO05D000022 8.1e-19 98.2 77 64.9
Sopen11g008070 Solanum pennellii HOM05D008966 ORTHO05D011127 8.1e-19 98.2 73 67.1
PGSC0003DMG400038477 Solanum tuberosum HOM05D008966 ORTHO05D011465 1.1e-18 97.8 93 55.9
Sopen03g010890 Solanum pennellii HOM05D008663 ORTHO05D011127 1.4e-18 97.4 87 56.3
PGSC0003DMG400036686 Solanum tuberosum HOM05D008663 ORTHO05D011127 2.4e-18 96.7 123 49.6
PGSC0003DMG400045462 Solanum tuberosum HOM05D008663 ORTHO05D017125 3.1e-18 96.3 100 55.0
Sopen10g010510 Solanum pennellii HOM05D008663 ORTHO05D011127 6.9e-18 95.1 79 62.0
PGSC0003DMG400041265 Solanum tuberosum HOM05D008663 ORTHO05D000007 6.9e-18 95.1 122 50.0
Sopen10g010990 Solanum pennellii HOM05D000024 ORTHO05D000007 9.0e-18 94.7 57 78.9
PGSC0003DMG400042100 Solanum tuberosum HOM05D008663 ORTHO05D011127 1.5e-17 94.0 123 48.8
Sopen11g008120 Solanum pennellii HOM05D000014 ORTHO05D000016 2.0e-17 93.6 72 65.3
PGSC0003DMG400039526 Solanum tuberosum HOM05D008663 ORTHO05D396772 2.6e-17 93.2 95 56.8
PGSC0003DMG400043914 Solanum tuberosum HOM05D008663 ORTHO05D017125 4.5e-17 92.4 123 48.0
PGSC0003DMG400038425 Solanum tuberosum HOM05D008663 ORTHO05D017125 5.8e-17 92.0 123 49.6
PGSC0003DMG400043408 Solanum tuberosum HOM05D008663 ORTHO05D011127 5.8e-17 92.0 123 48.8
Sopen11g007980 Solanum pennellii HOM05D000014 ORTHO05D000016 7.6e-17 91.7 77 66.2
Sopen08g015180 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-16 90.9 73 61.6
PGSC0003DMG400036497 Solanum tuberosum HOM05D008663 ORTHO05D011127 3.8e-16 89.4 120 48.3
Sopen11g013340 Solanum pennellii HOM05D000024 ORTHO05D000007 6.4e-16 88.6 76 61.8
Sopen09g009790 Solanum pennellii HOM05D000155 ORTHO05D000022 8.4e-16 88.2 83 54.2
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 1.4e-15 87.4 68 64.7
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 1.9e-15 87.0 80 55.0
PGSC0003DMG400038309 Solanum tuberosum HOM05D008663 ORTHO05D011127 2.7e-14 83.2 70 60.0
PGSC0003DMG400038562 Solanum tuberosum HOM05D008663 ORTHO05D011127 1.0e-13 81.3 71 57.7
PGSC0003DMG400036171 Solanum tuberosum HOM05D008663 ORTHO05D011127 1.8e-13 80.5 118 44.9
Sopen01g023890 Solanum pennellii HOM05D000003 ORTHO05D015569 2.3e-13 80.1 79 53.2
Sopen10g010450 Solanum pennellii HOM05D000003 ORTHO05D000004 6.7e-13 78.6 80 52.5
Sopen09g015050 Solanum pennellii HOM05D000003 ORTHO05D000004 8.7e-13 78.2 88 44.3
Sopen01g016010 Solanum pennellii HOM05D000003 ORTHO05D000022 1.5e-12 77.4 91 45.1
Sopen03g010960 Solanum pennellii HOM05D008966 ORTHO05D011127 4.3e-12 75.9 75 52.0
PGSC0003DMG400035296 Solanum tuberosum HOM05D008663 ORTHO05D011127 5.6e-12 75.5 99 48.5
PGSC0003DMG400041037 Solanum tuberosum HOM05D000024 ORTHO05D000007 5.6e-12 75.5 78 46.2
PGSC0003DMG400045218 Solanum tuberosum HOM05D008966 ORTHO05D011127 5.6e-12 75.5 63 57.1
PGSC0003DMG400043989 Solanum tuberosum HOM05D008966 ORTHO05D011465 7.4e-12 75.1 81 51.9
Sopen02g002350 Solanum pennellii HOM05D000014 ORTHO05D000016 9.6e-12 74.7 50 72.0
PGSC0003DMG400041972 Solanum tuberosum HOM05D008663 ORTHO05D011127 1.3e-11 74.3 84 53.6
Sopen03g011820 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-11 73.9 103 36.9
Sopen07g013600 Solanum pennellii HOM05D008966 ORTHO05D011127 1.6e-11 73.9 69 50.7
Sopen03g012480 Solanum pennellii HOM05D000014 ORTHO05D000016 2.1e-11 73.6 68 50.0
Sopen05g017790 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-11 72.8 72 50.0
Sopen10g010500 Solanum pennellii HOM05D010618 ORTHO05D017133 1.8e-10 70.5 195 32.8
Sopen10g010480 Solanum pennellii HOM05D000155 ORTHO05D000022 3.1e-10 69.7 56 64.3
PGSC0003DMG400040467 Solanum tuberosum HOM05D010618 ORTHO05D017133 4.0e-10 69.3 248 28.2
PGSC0003DMG400045205 Solanum tuberosum HOM05D008663 ORTHO05D017125 4.0e-10 69.3 79 51.9
Sopen09g015020 Solanum pennellii HOM05D000024 ORTHO05D000007 6.9e-10 68.6 43 81.4
Sopen10g010410 Solanum pennellii HOM05D000070 ORTHO05D011127 6.9e-10 68.6 52 69.2
Sopen03g013510 Solanum pennellii HOM05D000014 ORTHO05D000016 2.6e-09 66.6 77 45.5
Sopen04g016850 Solanum pennellii HOM05D000024 ORTHO05D000006 3.4e-09 66.2 64 54.7
Sopen08g015490 Solanum pennellii HOM05D000003 ORTHO05D000022 5.8e-09 65.5 54 63.0
PGSC0003DMG400046069 Solanum tuberosum HOM05D008966 ORTHO05D011127 5.8e-09 65.5 48 64.6
Sopen11g007910 Solanum pennellii HOM05D017709 ORTHO05D026164 9.9e-09 64.7 51 60.8
Sopen06g013970 Solanum pennellii HOM05D000003 ORTHO05D000004 2.2e-08 63.5 60 50.0
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 2.9e-08 63.2 72 44.4
Sopen03g010940 Solanum pennellii HOM05D000004 ORTHO05D000002 3.8e-08 62.8 54 57.4
Sopen09g016340 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-08 62.4 60 46.7
PGSC0003DMG400045302 Solanum tuberosum HOM05D008663 ORTHO05D011127 4.9e-08 62.4 89 43.8
Sopen03g012370 Solanum pennellii HOM05D000024 ORTHO05D000007 6.4e-08 62.0 77 44.2
PGSC0003DMG400010365 Solanum tuberosum HOM05D037236 ORTHO05D000007 1.1e-07 61.2 66 48.5
PGSC0003DMG400010366 Solanum tuberosum HOM05D037236 ORTHO05D000007 1.1e-07 61.2 66 48.5
Sopen00g003400 Solanum pennellii HOM05D000024 ORTHO05D000007 1.9e-07 60.5 80 42.5
Sopen09g030960 Solanum pennellii HOM05D000003 ORTHO05D000004 3.2e-07 59.7 66 42.4
Sopen11g013390 Solanum pennellii HOM05D000024 ORTHO05D000007 3.2e-07 59.7 68 41.2
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 4.2e-07 59.3 60 48.3
Sopen07g011740 Solanum pennellii HOM05D000024 ORTHO05D000007 4.2e-07 59.3 89 37.1
Sopen00g001110 Solanum pennellii HOM05D000003 ORTHO05D000007 5.5e-07 58.9 80 41.2
Sopen06g013950 Solanum pennellii HOM05D000003 ORTHO05D000004 5.5e-07 58.9 58 51.7
Sopen06g016720 Solanum pennellii HOM05D000024 ORTHO05D017131 5.5e-07 58.9 77 40.3
PGSC0003DMG400045918 Solanum tuberosum HOM05D038065 ORTHO05D000007 5.5e-07 58.9 81 38.3
Sopen08g013110 Solanum pennellii HOM05D000024 ORTHO05D000007 9.3e-07 58.2 82 39.0
Sopen11g008090 Solanum pennellii HOM05D000024 ORTHO05D000006 9.3e-07 58.2 75 48.0
PGSC0003DMG400037591 Solanum tuberosum HOM05D010285 ORTHO05D011400 1.2e-06 57.8 78 41.0
Sopen05g017830 Solanum pennellii HOM05D000004 ORTHO05D000022 3.5e-06 56.2 272 24.6
Sopen01g008290 Solanum pennellii HOM05D000047 ORTHO05D000589 4.6e-06 55.8 88 37.5
Sopen11g007850 Solanum pennellii HOM05D000155 ORTHO05D000022 6.0e-06 55.5 58 50.0


User provided reference genes

Program Settings