Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g008640 Solanum pennellii HOM05D011435 ORTHO05D012656 1.7e-108 396.0 195 100.0
Sopen11g024330 Solanum pennellii HOM05D011435 ORTHO05D012656 2.7e-45 186.0 295 41.4
Sopen03g021860 Solanum pennellii HOM05D011435 ORTHO05D012656 2.1e-42 176.4 97 90.7
Sopen07g006090 Solanum pennellii HOM05D000017 ORTHO05D012656 2.1e-42 176.4 97 90.7
Sopen12g015000 Solanum pennellii HOM05D000014 ORTHO05D000016 6.2e-42 174.9 104 85.6
Sopen04g024770 Solanum pennellii HOM05D011435 ORTHO05D012656 8.1e-42 174.5 97 88.7
Sopen11g011060 Solanum pennellii HOM05D011435 ORTHO05D012656 2.4e-41 172.9 97 88.7
Sopen03g007270 Solanum pennellii HOM05D011435 ORTHO05D012656 1.9e-38 163.3 96 86.5
PGSC0003DMG400037507 Solanum tuberosum HOM05D011435 ORTHO05D012656 3.2e-38 162.5 96 84.4
PGSC0003DMG400042437 Solanum tuberosum HOM05D011435 ORTHO05D012656 1.6e-37 160.2 96 83.3
PGSC0003DMG400043666 Solanum tuberosum HOM05D011435 ORTHO05D012656 2.5e-27 126.3 84 77.4
PGSC0003DMG400039146 Solanum tuberosum HOM05D011435 ORTHO05D012656 9.3e-22 107.8 65 86.2
Sopen11g009970 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-19 100.9 62 83.9
Sopen07g025260 Solanum pennellii HOM05D000039 ORTHO05D000366 1.3e-18 97.4 93 59.1
PGSC0003DMG400042756 Solanum tuberosum HOM05D011435 ORTHO05D012656 9.9e-16 87.8 54 85.2
PGSC0003DMG400026104 Solanum tuberosum HOM05D011435 ORTHO05D012656 3.8e-15 85.9 55 80.0
PGSC0003DMG400044352 Solanum tuberosum HOM05D011435 ORTHO05D012656 1.1e-14 84.3 50 88.0
Solyc07g017400.3 Solanum lycopersicum HOM05D005445 ORTHO05D007043 2.4e-14 83.2 125 44.0
Sopen07g006100 Solanum pennellii HOM05D005445 ORTHO05D007043 2.4e-14 83.2 125 44.0
Nitab4.5_0000899g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 3.2e-14 82.8 125 44.0
Nitab4.5_0004036g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 7.1e-14 81.6 125 44.0
CAN.G146.2 Capsicum annuum HOM05D005445 ORTHO05D007043 2.1e-13 80.1 125 42.4
Peaxi162Scf01184g00140 Petunia axillaris HOM05D005445 ORTHO05D007043 1.9e-11 73.6 58 62.1
Actinidia07565 Actinidia chinensis HOM05D005445 ORTHO05D007043 1.1e-09 67.8 57 61.4
PGSC0003DMG400034420 Solanum tuberosum HOM05D011435 ORTHO05D012656 3.1e-09 66.2 38 86.8
Prupe.1G063800 Prunus persica HOM05D005445 ORTHO05D007043 5.3e-09 65.5 56 57.1
Cfa020755 Carpinus fangiana HOM05D005445 ORTHO05D007043 1.5e-08 63.9 58 55.2
Oeu028820.1 Olea europaea HOM05D005445 ORTHO05D007043 1.5e-08 63.9 109 38.5
Duzib170G0675 Durio zibethinus HOM05D005445 ORTHO05D007043 3.4e-08 62.8 56 53.6
Glyma.05G220700 Glycine max HOM05D005445 ORTHO05D007043 4.5e-08 62.4 117 35.0
MD16G1238000 Malus domestica HOM05D005445 ORTHO05D007043 4.5e-08 62.4 56 53.6
Dinv00323 Davidia involucrata HOM05D005445 ORTHO05D007043 5.8e-08 62.0 57 56.1
Dinv26479 Davidia involucrata HOM05D005445 ORTHO05D007043 5.8e-08 62.0 57 56.1
Glyma.08G027200 Glycine max HOM05D005445 ORTHO05D007043 5.8e-08 62.0 117 35.0
CiPaw.15G161100 Carya illinoinensis HOM05D005445 ORTHO05D007043 1.3e-07 60.8 56 55.4
Eucgr.C00062 Eucalyptus grandis HOM05D005445 ORTHO05D007043 1.7e-07 60.5 56 50.0
Ciclev10008923m.g Citrus clementina HOM05D005445 ORTHO05D007043 2.9e-07 59.7 68 45.6
Thecc.09G196900 Theobroma cacao HOM05D005445 ORTHO05D007043 2.9e-07 59.7 56 51.8
QL11p008649 Quercus lobata HOM05D005445 ORTHO05D007043 1.1e-06 57.8 68 44.1
Cpa.g.sc115.19 Carica papaya HOM05D005445 ORTHO05D007043 1.9e-06 57.0 56 51.8
Hma1.2p1_0314F.1_g122070 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 2.5e-06 56.6 57 50.9
Hma1.2p1_0314F.1_g122080 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 2.5e-06 56.6 57 50.9
Dinv12613 Davidia involucrata HOM05D005445 ORTHO05D007043 3.2e-06 56.2 57 50.9
Nn8g41135 Nelumbo nucifera HOM05D005445 ORTHO05D007043 3.2e-06 56.2 70 42.9
CANSAT80G1260 Cannabis sativa HOM05D005445 ORTHO05D007043 4.2e-06 55.8 56 51.8
HanXRQChr10g0309531 Helianthus annuus HOM05D005445 ORTHO05D007043 4.2e-06 55.8 104 34.6
VMungo0251G0086 Vigna mungo HOM05D005445 ORTHO05D007043 4.2e-06 55.8 56 48.2
Cc00_g00070 Coffea canephora HOM05D005445 ORTHO05D007043 5.5e-06 55.5 57 47.4
Lj4g0004845 Lotus japonicus HOM05D005445 ORTHO05D007043 5.5e-06 55.5 116 35.3
ECA234G2663 Erigeron canadensis HOM05D005445 ORTHO05D007043 9.3e-06 54.7 103 35.9
TAR383G0382 Trochodendron aralioides HOM05D005445 ORTHO05D007043 9.3e-06 54.7 71 45.1
TAR383G1024 Trochodendron aralioides HOM05D005445 ORTHO05D007043 9.3e-06 54.7 71 45.1


User provided reference genes

Program Settings