Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g002000 Solanum pennellii HOM05D004048 ORTHO05D004859 9.5e-167 590.1 300 100.0
Solyc09g007130.3 Solanum lycopersicum HOM05D004048 ORTHO05D004859 8.0e-166 587.0 300 99.3
PGSC0003DMG400002011 Solanum tuberosum HOM05D004048 ORTHO05D004859 2.3e-165 585.5 299 98.7
CAN.G439.29 Capsicum annuum HOM05D004048 ORTHO05D004859 3.5e-161 571.6 298 97.0
Nitab4.5_0000615g0020 Nicotiana tabacum HOM05D004048 ORTHO05D004859 4.3e-159 564.7 298 95.0
Peaxi162Scf00217g00711 Petunia axillaris HOM05D004048 ORTHO05D004859 1.2e-158 563.1 298 95.0
CSS0029554 Camellia sinensis var. sinensis HOM05D004048 ORTHO05D004859 1.2e-150 536.6 297 90.6
CSS0027402 Camellia sinensis var. sinensis HOM05D004048 ORTHO05D004859 5.2e-149 531.2 297 89.9
Lj9C589T5 Lonicera japonica HOM05D004048 ORTHO05D004859 6.8e-149 530.8 295 89.5
Dinv32522 Davidia involucrata HOM05D004048 ORTHO05D004859 8.9e-149 530.4 297 89.2
TWI23G0617 Tripterygium wilfordii HOM05D004048 ORTHO05D004859 2.6e-148 528.9 297 88.9
Nitab4.5_0005222g0030 Nicotiana tabacum HOM05D004048 ORTHO05D004859 4.4e-148 528.1 299 90.3
Migut.B01799 Erythranthe guttata HOM05D004048 ORTHO05D004859 6.4e-147 524.2 297 87.2
MD07G1131200 Malus domestica HOM05D004048 ORTHO05D004859 1.1e-146 523.5 297 87.9
Gohir.D08G043100 Gossypium hirsutum HOM05D004048 ORTHO05D004859 1.4e-146 523.1 294 88.4
Gorai.004G041700 Gossypium raimondii HOM05D004048 ORTHO05D004859 1.4e-146 523.1 294 88.4
Sp5g01880 Schrenkiella parvula HOM05D004048 ORTHO05D004859 1.4e-146 523.1 297 88.6
COL.COLO4_12778 Corchorus olitorius HOM05D004048 ORTHO05D004859 1.9e-146 522.7 297 86.5
Duzib268G0835 Durio zibethinus HOM05D004048 ORTHO05D004859 1.9e-146 522.7 296 87.2
Manes.05G029300 Manihot esculenta HOM05D004048 ORTHO05D004859 1.9e-146 522.7 297 86.5
Actinidia10075 Actinidia chinensis HOM05D004048 ORTHO05D004859 2.4e-146 522.3 297 86.9
Ciclev10020577m.g Citrus clementina HOM05D004048 ORTHO05D004859 4.1e-146 521.5 297 86.5
BraA09t40782Z Brassica rapa HOM05D004048 ORTHO05D004859 7.1e-146 520.8 297 87.2
A07p25550 Brassica napus HOM05D004048 ORTHO05D004859 9.2e-146 520.4 297 87.2
Thecc.01G352400 Theobroma cacao HOM05D004048 ORTHO05D004859 9.2e-146 520.4 297 86.5
vmacro13227 Vaccinium macrocarpon HOM05D004048 ORTHO05D004859 1.2e-145 520.0 298 87.6
Hund27241 Selenicereus undatus HOM05D004048 ORTHO05D004859 1.6e-145 519.6 297 86.9
Cc02_g21240 Coffea canephora HOM05D004048 ORTHO05D004859 2.1e-145 519.2 297 86.9
Gohir.A08G032200 Gossypium hirsutum HOM05D004048 ORTHO05D004859 2.1e-145 519.2 294 87.1
BcaB02g07374 Brassica carinata HOM05D004048 ORTHO05D004859 3.5e-145 518.5 297 86.9
BolC6t37921H Brassica oleracea HOM05D004048 ORTHO05D004859 3.5e-145 518.5 297 86.9
BraA07t30196Z Brassica rapa HOM05D004048 ORTHO05D004859 3.5e-145 518.5 297 86.9
Potri.014G090500 Populus trichocarpa HOM05D004048 ORTHO05D004859 3.5e-145 518.5 297 85.9
C06p27540 Brassica napus HOM05D004048 ORTHO05D004859 4.6e-145 518.1 297 86.9
A09p53600 Brassica napus HOM05D004048 ORTHO05D004859 6.0e-145 517.7 297 86.9
QL04p055532 Quercus lobata HOM05D004048 ORTHO05D004859 6.0e-145 517.7 296 86.8
AL5G43890 Arabidopsis lyrata HOM05D004048 ORTHO05D004859 7.8e-145 517.3 297 86.5
BcaC08g45130 Brassica carinata HOM05D004048 ORTHO05D004859 7.8e-145 517.3 297 86.5
Gohir.D08G154300 Gossypium hirsutum HOM05D004048 ORTHO05D004859 7.8e-145 517.3 297 85.9
Gorai.004G160400 Gossypium raimondii HOM05D004048 ORTHO05D004859 7.8e-145 517.3 297 85.9
TAR375G1056 Trochodendron aralioides HOM05D004048 ORTHO05D004859 1.3e-144 516.5 297 87.2
Nn1g01686 Nelumbo nucifera HOM05D004048 ORTHO05D004859 1.7e-144 516.2 296 85.8
THA.LOC104817317 Tarenaya hassleriana HOM05D004048 ORTHO05D004859 1.7e-144 516.2 297 86.2
Hma1.2p1_0335F.1_g128890 Hydrangea macrophylla HOM05D004048 ORTHO05D004859 2.3e-144 515.8 297 84.8
AT3G61530 Arabidopsis thaliana HOM05D004048 ORTHO05D004859 3.0e-144 515.4 297 86.2
Thhalv10001521m.g Eutrema salsugineum HOM05D004048 ORTHO05D004859 3.0e-144 515.4 297 86.2
Sp4g28180 Schrenkiella parvula HOM05D004048 ORTHO05D004859 3.0e-144 515.4 297 86.9
Aa31LG10G15450 Aethionema arabicum HOM05D004048 ORTHO05D004859 5.1e-144 514.6 297 86.2
Aqoxy5G04084 Aquilegia oxysepala HOM05D004048 ORTHO05D004859 5.1e-144 514.6 296 86.1
SGA_v2.0_scaffold4G02279 Striga asiatica HOM05D004048 ORTHO05D004859 6.6e-144 514.2 296 85.8
EL10Ac1g00354 Beta vulgaris HOM05D004048 ORTHO05D004859 8.6e-144 513.8 297 84.8
BcaC07g40651 Brassica carinata HOM05D004048 ORTHO05D004859 1.1e-143 513.5 297 85.9
BolC8t51222H Brassica oleracea HOM05D004048 ORTHO05D004859 1.1e-143 513.5 297 85.9
Eucgr.B01988 Eucalyptus grandis HOM05D004048 ORTHO05D004859 1.1e-143 513.5 297 84.2
AT2G46110 Arabidopsis thaliana HOM05D004048 ORTHO05D004859 1.5e-143 513.1 297 86.2
Prupe.2G177600 Prunus persica HOM05D004048 ORTHO05D004859 1.5e-143 513.1 297 85.9
C08p36390 Brassica napus HOM05D004048 ORTHO05D004859 2.5e-143 512.3 297 85.9
PGR004G0897 Punica granatum HOM05D004048 ORTHO05D004859 2.5e-143 512.3 296 85.5
Sc01g0003210 Simmondsia chinensis HOM05D004048 ORTHO05D004859 2.5e-143 512.3 297 84.5
arahy.Tifrunner.gnm1.ann1.9CR96V Arachis hypogaea HOM05D004048 ORTHO05D004859 3.3e-143 511.9 299 84.3
FvH4_7g15370 Fragaria vesca HOM05D004048 ORTHO05D004859 3.3e-143 511.9 297 85.9
FAN03G0096 Fragaria x ananassa HOM05D004048 ORTHO05D004859 3.3e-143 511.9 297 85.9
FAN06G1753 Fragaria x ananassa HOM05D004048 ORTHO05D004859 4.3e-143 511.5 297 85.9
MBI03_g34597_MAGBIO Magnolia biondii HOM05D004048 ORTHO05D004859 4.3e-143 511.5 297 85.2
Sabra14G0065600 Salix brachista HOM05D004048 ORTHO05D004859 5.6e-143 511.1 297 84.5
arahy.Tifrunner.gnm1.ann1.8BBS1S Arachis hypogaea HOM05D004048 ORTHO05D004859 7.3e-143 510.8 299 83.9
Carub.0004s2881 Capsella rubella HOM05D004048 ORTHO05D004859 9.6e-143 510.4 297 85.2
Haze_15565 Corylus avellana HOM05D004048 ORTHO05D004859 1.2e-142 510.0 309 82.5
FAN10G1698 Fragaria x ananassa HOM05D004048 ORTHO05D004859 2.1e-142 509.2 297 85.5
FAN10G3606 Fragaria x ananassa HOM05D004048 ORTHO05D004859 2.1e-142 509.2 297 85.5
DCAR_025214 Daucus carota HOM05D004048 ORTHO05D004859 1.8e-141 506.1 297 84.8
CiPaw.02G034800 Carya illinoinensis HOM05D004048 ORTHO05D004859 2.4e-141 505.8 297 84.5
Oeu054354.2 Olea europaea HOM05D004048 ORTHO05D004859 2.4e-141 505.8 344 75.9
Psat4g156920 Pisum sativum HOM05D004048 ORTHO05D004859 4.0e-141 505.0 297 83.8
AUR62004413 Chenopodium quinoa HOM05D004048 ORTHO05D004859 6.8e-141 504.2 297 83.8
CsaV3_7G025860 Cucumis sativus L. HOM05D004048 ORTHO05D004859 6.8e-141 504.2 296 83.4
PSO170G0644 Papaver somniferum HOM05D004048 ORTHO05D004859 6.8e-141 504.2 296 83.4
Rhsim07G0205800 Rhododendron simsii HOM05D004048 ORTHO05D004859 6.8e-141 504.2 333 78.1
RcHm_v2.0_Chr1g0357691 Rosa chinensis HOM05D004048 ORTHO05D004859 6.8e-141 504.2 297 84.5
PSO063G1481 Papaver somniferum HOM05D004048 ORTHO05D004859 8.9e-141 503.8 296 83.1
Lalb_Chr17g0338041 Lupinus albus HOM05D004048 ORTHO05D004859 3.4e-140 501.9 297 83.2
TPR.G28287 Trifolium pratense HOM05D004048 ORTHO05D004859 3.4e-140 501.9 297 83.8
arahy.Tifrunner.gnm1.ann1.8G3C0P Arachis hypogaea HOM05D004048 ORTHO05D004859 5.8e-140 501.1 297 83.2
Medtr8g028555 Medicago truncatula HOM05D004048 ORTHO05D004859 5.8e-140 501.1 297 83.2
Lj1g0027864 Lotus japonicus HOM05D004048 ORTHO05D004859 7.6e-140 500.7 297 83.2
FAN06G0189 Fragaria x ananassa HOM05D004048 ORTHO05D004859 1.3e-139 500.0 314 80.9
HanXRQChr17g0562171 Helianthus annuus HOM05D004048 ORTHO05D004859 2.9e-139 498.8 297 84.2
CANSAT56G4107 Cannabis sativa HOM05D004048 ORTHO05D004859 4.9e-139 498.0 297 83.2
Carub.0005s2822 Capsella rubella HOM05D004048 ORTHO05D004859 1.4e-138 496.5 297 82.8
Lj5g0009706 Lotus japonicus HOM05D004048 ORTHO05D004859 3.2e-138 495.4 297 82.8
VMungo0331G0386 Vigna mungo HOM05D004048 ORTHO05D004859 4.2e-138 495.0 297 81.8
TPR.G37181 Trifolium pratense HOM05D004048 ORTHO05D004859 7.1e-138 494.2 297 81.5
Atru.chr7.1494 Acer truncatum HOM05D004048 ORTHO05D004859 1.6e-137 493.0 297 82.5
Duzib138G1147 Durio zibethinus HOM05D004048 ORTHO05D004859 3.5e-137 491.9 326 76.4
Glyma.07G064600 Glycine max HOM05D004048 ORTHO05D004859 4.6e-137 491.5 297 81.5
HPP92_005267 Vanilla planifolia HOM05D004048 ORTHO05D004859 1.0e-136 490.3 295 80.7
Lsat_1_v5_gn_4_35260 Lactuca sativa HOM05D004048 ORTHO05D004859 1.7e-136 489.6 296 82.4
Ca_03490_v3 Cicer arietinum L. HOM05D004048 ORTHO05D004859 6.6e-136 487.6 323 76.5
BcaC07g40671 Brassica carinata HOM05D004048 ORTHO05D004859 2.5e-135 485.7 304 81.6
Phvul.010G104900 Phaseolus vulgaris HOM05D004048 ORTHO05D004859 2.8e-134 482.3 285 83.5
RcHm_v2.0_Chr1g0357711 Rosa chinensis HOM05D004048 ORTHO05D004859 1.8e-133 479.6 296 79.1
MELO3C014805.2 Cucumis melo HOM05D004048 ORTHO05D004859 6.9e-133 477.6 294 79.9
AUR62022619 Chenopodium quinoa HOM05D004048 ORTHO05D004859 2.0e-132 476.1 275 85.1
Rhsim07G0010400 Rhododendron simsii HOM05D004048 ORTHO05D004859 1.7e-131 473.0 297 81.5
MELO3C012767.2 Cucumis melo HOM05D004048 ORTHO05D004859 2.7e-129 465.7 360 68.3
SEGI_12250 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 1.0e-128 463.8 296 75.0
FvH4_7g15371 Fragaria vesca HOM05D004048 ORTHO05D004859 2.5e-127 459.1 338 68.9
GSVIVG01026967001 Vitis vinifera HOM05D004048 ORTHO05D004859 2.5e-127 459.1 257 89.5
CARHR107270 Cardamine hirsuta HOM05D004048 ORTHO05D004859 2.4e-125 452.6 259 87.3
unitig_60.g25627 Utricularia gibba HOM05D004048 ORTHO05D004859 9.0e-125 450.7 299 75.6
Rhsim07G0206900 Rhododendron simsii HOM05D004048 ORTHO05D004859 3.4e-124 448.7 350 69.1
ClCG09G009090 Citrullus lanatus HOM05D004048 ORTHO05D004859 3.8e-123 445.3 296 75.3
Ah.05g180160 Amaranthus hybridus HOM05D004048 ORTHO05D004859 7.1e-122 441.0 297 74.7
Os01g0225500 Oryza sativa ssp. japonica HOM05D004048 ORTHO05D004859 1.6e-121 439.9 296 72.6
ECA234G0147 Erigeron canadensis HOM05D004048 ORTHO05D004859 3.5e-121 438.7 283 80.2
Glyma.09G254700 Glycine max HOM05D004048 ORTHO05D004859 2.3e-120 436.0 297 73.4
Mapoly0035s0043 Marchantia polymorpha HOM05D004048 ORTHO05D004859 1.9e-119 433.0 294 71.8
Gohir.A08G133000 Gossypium hirsutum HOM05D004048 ORTHO05D004859 4.3e-119 431.8 257 83.7
Pp3c7_220 Physcomitrium patens HOM05D004048 ORTHO05D004859 2.8e-118 429.1 296 69.6
SMO144G0210 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 9.0e-117 424.1 296 69.3
AagrBONN_evm.TU.Sc2ySwM_117.1042 Anthoceros agrestis HOM05D004048 ORTHO05D004859 6.5e-115 417.9 293 69.3
AagrBONN_evm.TU.Sc2ySwM_117.2358 Anthoceros agrestis HOM05D004048 ORTHO05D004859 1.9e-114 416.4 293 68.9
Cpa.g.sc11.73 Carica papaya HOM05D004048 ORTHO05D004859 4.2e-114 415.2 297 73.7
MCO13G154 Micromonas commoda HOM05D004048 ORTHO05D004859 3.0e-112 409.1 289 67.5
CDE11G0110 Ceratophyllum demersum HOM05D004048 ORTHO05D004859 8.7e-112 407.5 245 82.9
Cre12.g508550 Chlamydomonas reinhardtii HOM05D004048 ORTHO05D004859 6.3e-110 401.4 297 63.3
Medtr4g037305 Medicago truncatula HOM05D004048 ORTHO05D004859 8.2e-110 401.0 241 83.0
FAN10G3616 Fragaria x ananassa HOM05D004048 ORTHO05D004859 5.9e-108 394.8 328 63.4
CBR_g45417 Chara braunii HOM05D004048 ORTHO05D004859 1.1e-106 390.6 287 65.2
SMO356G0035 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 5.5e-106 388.3 293 65.5
SMO119G0299 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 1.1e-103 380.6 266 69.2
BcaC07g42671 Brassica carinata HOM05D004048 ORTHO05D004859 1.0e-99 367.5 297 67.0
FAN10G1509 Fragaria x ananassa HOM05D004048 ORTHO05D004859 5.5e-98 361.7 240 76.2
Nn6g32447 Nelumbo nucifera HOM05D004048 ORTHO05D004859 7.2e-98 361.3 296 65.2
Zm00001eb339000 Zea mays HOM05D004048 ORTHO05D004859 2.1e-97 359.8 211 85.3
FAN06G1997 Fragaria x ananassa HOM05D004048 ORTHO05D004859 5.1e-96 355.1 334 56.9
ATR0751G082 Amborella trichopoda HOM05D004048 ORTHO05D004859 9.7e-95 350.9 209 83.3
FAN06G4041 Fragaria x ananassa HOM05D004048 ORTHO05D004859 9.7e-95 350.9 260 68.8
PRCOL_00005166 Prasinoderma coloniale HOM05D004048 ORTHO05D004859 2.4e-93 346.3 295 59.0
Eucgr.B01984 Eucalyptus grandis HOM05D004048 ORTHO05D004859 1.2e-92 344.0 325 58.8
SEGI_21771 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 2.7e-89 332.8 210 77.1
ATR0751G137 Amborella trichopoda HOM05D004048 ORTHO05D004859 1.8e-88 330.1 204 77.0
AL4G45340 Arabidopsis lyrata HOM05D004048 ORTHO05D004859 1.5e-87 327.0 196 84.2
Eucgr.B01986 Eucalyptus grandis HOM05D004048 ORTHO05D004859 6.5e-75 285.0 286 57.7
Medtr4g037245 Medicago truncatula HOM05D004048 ORTHO05D004859 9.4e-74 281.2 203 73.9
PGSC0003DMG400018716 Solanum tuberosum HOM05D004048 ORTHO05D004859 6.1e-65 251.9 129 96.1
Cfa001640 Carpinus fangiana HOM05D004048 ORTHO05D004859 1.6e-60 237.3 263 49.0
SEGI_25526 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 7.7e-60 235.0 161 68.3
TPR.G28294 Trifolium pratense HOM05D004048 ORTHO05D004859 5.7e-55 218.8 253 53.4
Os01g0225400 Oryza sativa ssp. japonica HOM05D004048 ORTHO05D004859 4.9e-54 215.7 126 83.3
arahy.Tifrunner.gnm1.ann1.CIF5FW Arachis hypogaea HOM05D004048 ORTHO05D004859 1.9e-45 187.2 112 76.8
Haze_27487 Corylus avellana HOM05D004048 ORTHO05D004859 1.6e-44 184.1 233 39.9
CAN.G439.28 Capsicum annuum HOM05D004048 ORTHO05D004859 2.3e-40 170.2 88 92.0
Haze_26957 Corylus avellana HOM05D005470 ORTHO05D006855 5.2e-40 169.1 208 45.2
MBI17_g16531_MAGBIO Magnolia biondii HOM05D004048 ORTHO05D004859 3.4e-39 166.4 104 77.9
Cfa003872 Carpinus fangiana HOM05D004048 ORTHO05D004859 1.7e-38 164.1 92 83.7
FAN01G2460 Fragaria x ananassa HOM05D004048 ORTHO05D004859 1.9e-37 160.6 92 82.6
Lj6g0001313 Lotus japonicus HOM05D004048 ORTHO05D004859 1.9e-37 160.6 97 74.2
SHI16536 Sapria himalayana HOM05D004048 ORTHO05D004859 5.4e-37 159.1 88 84.1
Medtr4g037315 Medicago truncatula HOM05D004048 ORTHO05D004859 3.9e-35 152.9 96 74.0
MBI12_g43904_MAGBIO Magnolia biondii HOM05D004048 ORTHO05D004859 3.3e-34 149.8 96 81.2
Ca_03489_v3 Cicer arietinum L. HOM05D004048 ORTHO05D004859 6.8e-32 142.1 110 70.9
Medtr4g037275 Medicago truncatula HOM05D004048 ORTHO05D004859 1.4e-29 134.4 76 84.2
arahy.Tifrunner.gnm1.ann1.63JPLQ Arachis hypogaea HOM05D004048 ORTHO05D004859 5.4e-29 132.5 82 73.2
Actinidia20163 Actinidia chinensis HOM05D004048 ORTHO05D004859 7.8e-28 128.6 189 48.7
arahy.Tifrunner.gnm1.ann1.DMYH1R Arachis hypogaea HOM05D004048 ORTHO05D004859 3.2e-21 106.7 73 68.5
SGA_v2.0_scaffold4G02383 Striga asiatica HOM05D004048 ORTHO05D051375 2.7e-20 103.6 63 85.7
ATR0751G274 Amborella trichopoda HOM05D004048 ORTHO05D004859 4.6e-20 102.8 73 60.3
Potri.002G164601 Populus trichocarpa HOM05D004048 ORTHO05D004859 3.0e-19 100.1 72 63.9
HanXRQChr15g0474641 Helianthus annuus HOM05D004048 ORTHO05D004859 4.3e-18 96.3 62 79.0
DCAR_025216 Daucus carota HOM05D003118 ORTHO05D003618 2.0e-15 87.4 78 66.7
FAN10G2371 Fragaria x ananassa HOM05D004048 ORTHO05D038698 1.2e-07 61.6 40 67.5


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