Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g019720 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-115 416.8 205 100.0
Sopen11g020850 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-71 270.8 186 73.1
Sopen07g006560 Solanum pennellii HOM05D000002 ORTHO05D000001 4.0e-68 261.9 186 70.4
Sopen12g009620 Solanum pennellii HOM05D000002 ORTHO05D000001 7.6e-67 257.7 186 69.9
CAN.G1676.14 Capsicum annuum HOM05D000002 ORTHO05D000001 3.1e-60 235.7 199 63.8
Sopen04g018360 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-52 208.8 159 65.4
PGSC0003DMG400009802 Solanum tuberosum HOM05D000002 ORTHO05D000001 3.6e-48 195.7 134 71.6
Sopen12g008750 Solanum pennellii HOM05D008933 ORTHO05D011098 5.1e-47 191.8 128 70.3
PGSC0003DMG400025468 Solanum tuberosum HOM05D000002 ORTHO05D000001 4.1e-44 182.2 103 90.3
Sopen09g018470 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-34 150.2 175 49.1
Sopen01g029030 Solanum pennellii HOM05D000002 ORTHO05D000001 8.0e-32 141.4 110 68.2
PGSC0003DMG400039400 Solanum tuberosum HOM05D000002 ORTHO05D000001 1.3e-26 124.0 89 74.2
SHI14921 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-21 107.1 183 37.7
SHI23844 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-21 106.3 179 34.1
SHI29753 Sapria himalayana HOM05D001030 ORTHO05D000001 1.8e-20 103.6 182 34.1
SHI06777 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-20 103.2 182 33.5
SHI16752 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-20 102.8 182 34.1
SHI40520 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-20 102.8 183 34.4
SHI25917 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-20 102.4 182 34.1
SHI26413 Sapria himalayana HOM05D000002 ORTHO05D000001 9.1e-20 101.3 184 34.2
Solyc08g066063.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.2e-19 100.9 81 65.4
SHI15390 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-19 100.5 179 34.1
SHI27215 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-19 100.1 186 34.9
SHI21519 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-19 99.8 182 31.9
SHI34552 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-19 99.8 181 33.7
CAN.G1433.27 Capsicum annuum HOM05D003161 ORTHO05D005173 4.5e-19 99.0 175 38.9
SHI09975 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-19 99.0 182 34.6
SHI11377 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-19 98.6 186 34.4
SHI17232 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-19 98.6 182 33.0
SHI23873 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-18 97.8 143 36.4
SHI02940 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-18 97.4 185 34.1
SHI23673 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-18 97.4 182 32.4
SHI32097 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-18 96.7 143 37.8
SHI32977 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-18 96.7 183 33.3
PGSC0003DMG400014684 Solanum tuberosum HOM05D000002 ORTHO05D000001 2.3e-18 96.7 66 77.3
SHI03307 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-18 95.5 180 34.4
SHI24178 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-18 95.5 143 37.8
SHI32732 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-18 95.5 182 33.0
SHI27632 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-18 94.7 179 33.0
SHI30603 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-18 94.7 143 36.4
SHI12565 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-17 94.4 185 33.5
Manes.16G056009 Manihot esculenta HOM05D000002 ORTHO05D000001 1.5e-17 94.0 144 36.8
SHI03750 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-17 94.0 182 31.9
SHI09366 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-17 94.0 143 36.4
SHI14439 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-17 94.0 179 31.8
SHI20242 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-17 94.0 182 32.4
SHI27844 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-17 94.0 182 33.5
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-17 94.0 178 33.1
SHI32533 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-17 94.0 175 34.3
SHI05330 Sapria himalayana HOM05D001596 ORTHO05D000001 2.5e-17 93.2 143 36.4
SHI09499 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-17 93.2 143 36.4
SHI16945 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-17 93.2 195 31.8
SHI41210 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-17 93.2 163 34.4
SHI49078 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-17 93.2 146 38.4
SHI14540 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-17 92.8 181 32.0
SHI24173 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-17 92.8 143 36.4
SHI49787 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-17 92.4 146 37.7
SHI14291 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-17 91.3 179 33.0
SHI26125 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-17 91.3 142 38.0
SHI33187 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-17 91.3 179 33.5
SHI22311 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-16 90.9 182 32.4
SHI35811 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-16 90.9 171 33.9
Solyc07g017255.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.2e-16 90.9 70 68.6
SHI15625 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-16 90.5 143 35.7
SHI22147 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-16 90.5 182 31.9
SHI26358 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-16 90.5 179 31.8
SHI32931 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-16 90.5 143 34.3
SHI50423 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-16 90.5 143 35.7
SHI01243 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-16 90.1 173 31.8
SHI22286 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-16 90.1 143 38.5
SHI10701 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-16 89.7 143 36.4
SHI08885 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-16 88.6 175 32.0
SHI21873 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-16 88.6 146 35.6
Manes.12G129950 Manihot esculenta HOM05D000002 ORTHO05D000001 8.0e-16 88.2 144 34.7
SHI37970 Sapria himalayana HOM05D000002 ORTHO05D000001 8.0e-16 88.2 136 37.5
SHI06528 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-15 87.8 182 31.9
SHI03781 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-15 87.4 182 31.3
SHI10616 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-15 87.4 179 30.7
SHI20110 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-15 87.0 143 35.7
SHI11777 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-15 86.7 143 35.0
SHI03814 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-15 86.3 143 34.3
SHI24860 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-15 86.3 192 30.2
Manes.13G009802 Manihot esculenta HOM05D000002 ORTHO05D000001 4.0e-15 85.9 144 34.0
SHI06898 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-15 85.9 143 35.0
SHI07508 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-15 85.5 143 34.3
SHI34006 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-15 85.5 143 36.4
CAN.G710.25 Capsicum annuum HOM05D000011 ORTHO05D007164 6.8e-15 85.1 189 27.0
SHI06859 Sapria himalayana HOM05D000002 ORTHO05D000001 6.8e-15 85.1 182 29.7
SHI03492 Sapria himalayana HOM05D000002 ORTHO05D000001 8.8e-15 84.7 146 34.9
SHI07494 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-14 84.3 139 33.8
SHI15483 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-14 83.6 177 32.2
SHI14497 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-14 83.2 143 35.0
SHI47361 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-14 83.2 143 36.4
SHI28205 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-14 82.8 172 29.7
SHI27053 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-14 82.4 140 34.3
SHI29361 Sapria himalayana HOM05D000002 ORTHO05D000001 5.7e-14 82.0 180 30.6
SHI07176 Sapria himalayana HOM05D000002 ORTHO05D000001 9.8e-14 81.3 175 30.9
SHI23208 Sapria himalayana HOM05D000002 ORTHO05D000001 9.8e-14 81.3 143 35.7
SHI12089 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-13 80.1 151 33.1
VMungo1383G3272 Vigna mungo HOM05D003721 ORTHO05D004303 2.8e-13 79.7 159 32.1
SHI03861 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-13 79.0 189 30.2
SHI14336 Sapria himalayana HOM05D000002 ORTHO05D000001 8.3e-13 78.2 125 36.0
SHI01799 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-12 76.6 162 30.9
SHI03262 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-12 76.6 191 29.8
SHI32815 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-12 76.3 182 31.3
SHI38366 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-12 75.5 131 35.9
Manes.13G081001 Manihot esculenta HOM05D000002 ORTHO05D000001 7.0e-12 75.1 144 35.4
CAN.G1229.10 Capsicum annuum HOM05D004933 ORTHO05D005465 9.2e-12 74.7 53 66.0
SHI11084 Sapria himalayana HOM05D000002 ORTHO05D000001 9.2e-12 74.7 143 32.2
SHI29161 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-11 74.3 139 33.8
SHI32183 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-11 73.9 143 32.2
VMungo1309G0587 Vigna mungo HOM05D000002 ORTHO05D000001 7.8e-11 71.6 193 26.9
SHI30441 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-10 70.9 107 37.4
Sopen12g008650 Solanum pennellii HOM05D000014 ORTHO05D000031 1.7e-10 70.5 47 68.1
SHI38926 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-10 70.1 111 36.9
VMungo1215G2913 Vigna mungo HOM05D000070 ORTHO05D006344 2.9e-10 69.7 145 31.0
SHI04188 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-10 68.9 114 34.2
SHI28855 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-09 67.0 143 28.7
C07p24140 Brassica napus HOM05D000002 ORTHO05D000047 3.3e-09 66.2 147 29.9
SHI23173 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-09 66.2 127 30.7
SHI05778 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-09 65.5 126 31.0
SHI01080 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-09 65.1 100 39.0
SHI34296 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-09 65.1 107 34.6
SHI00649 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-09 64.7 125 32.0
SHI12017 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-09 64.7 114 35.1
SHI42928 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-09 64.7 97 38.1
SHI43078 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-09 64.7 97 38.1
SHI09331 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-08 64.3 97 38.1
SHI07334 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-08 63.9 123 33.3
SHI01660 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-08 63.5 128 31.2
SHI26924 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-08 62.8 113 33.6
Manes.10G074337 Manihot esculenta HOM05D000002 ORTHO05D000001 6.1e-08 62.0 74 40.5
Sabra18G0102700 Salix brachista HOM05D007305 ORTHO05D009886 6.1e-08 62.0 140 27.9
SHI25695 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-08 62.0 125 30.4
CANSAT54G0600 Cannabis sativa HOM05D000002 ORTHO05D000047 8.0e-08 61.6 130 30.0
SHI27000 Sapria himalayana HOM05D000002 ORTHO05D000001 8.0e-08 61.6 97 37.1
SHI32606 Sapria himalayana HOM05D000002 ORTHO05D000001 8.0e-08 61.6 75 41.3
SHI30488 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-07 61.2 74 41.9
HanXRQChr10g0282921 Helianthus annuus HOM05D000002 ORTHO05D000047 1.4e-07 60.8 178 25.8
VMungo0251G1851 Vigna mungo HOM05D000380 ORTHO05D002061 1.4e-07 60.8 142 29.6
Manes.05G201920 Manihot esculenta HOM05D000002 ORTHO05D000001 1.8e-07 60.5 96 34.4
Sabra06G0016700 Salix brachista HOM05D000027 ORTHO05D000066 1.8e-07 60.5 140 25.7
TWI79G0335 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 1.8e-07 60.5 146 28.1
SHI47267 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-07 60.1 143 28.7
ECA246G4200 Erigeron canadensis HOM05D001707 ORTHO05D000001 3.0e-07 59.7 74 41.9
Sabra07G0082100 Salix brachista HOM05D007305 ORTHO05D009886 3.0e-07 59.7 141 26.2
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 3.0e-07 59.7 141 26.2
Sabra16G0035300 Salix brachista HOM05D007305 ORTHO05D009886 3.0e-07 59.7 141 26.2
Sabra17G0125400 Salix brachista HOM05D007305 ORTHO05D009886 3.0e-07 59.7 141 26.2
SHI20230 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-07 59.7 95 36.8
TPR.G40630 Trifolium pratense HOM05D000002 ORTHO05D000001 3.0e-07 59.7 74 40.5
TPR.G8966 Trifolium pratense HOM05D000002 ORTHO05D000001 3.0e-07 59.7 74 40.5
TWI14G0936 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 3.0e-07 59.7 146 26.7
TWI74G0014 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 3.0e-07 59.7 146 28.1
Ca_09781_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 4.0e-07 59.3 201 23.9
Lalb_Chr15g0078731 Lupinus albus HOM05D000002 ORTHO05D000047 4.0e-07 59.3 138 27.5
SHI45159 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-07 58.9 72 40.3
CiPaw.13G082800 Carya illinoinensis HOM05D023524 ORTHO05D000001 6.8e-07 58.5 135 27.4
CANSAT54G0702 Cannabis sativa HOM05D000002 ORTHO05D000047 8.9e-07 58.2 131 33.6
ECA233G0681 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.9e-07 58.2 219 24.7
SHI07505 Sapria himalayana HOM05D000002 ORTHO05D000001 8.9e-07 58.2 97 33.0
VMungo0720G1958 Vigna mungo HOM05D001082 ORTHO05D005120 8.9e-07 58.2 168 29.8
HanXRQChr09g0242891 Helianthus annuus HOM05D000002 ORTHO05D000047 1.2e-06 57.8 167 26.3
CANSAT01G1817 Cannabis sativa HOM05D000002 ORTHO05D000047 1.5e-06 57.4 137 32.8
SHI24277 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-06 57.4 91 37.4
SHI28532 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-06 57.0 74 37.8
SHI34045 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-06 56.6 69 40.6
Sopen10g020710 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-06 56.6 223 24.7
Ca_26504_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 3.4e-06 56.2 169 23.7
SHI20370 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-06 56.2 97 36.1
Sopen01g037740 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-06 56.2 223 24.7
Sopen08g016270 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-06 56.2 156 25.6
TPR.G21631 Trifolium pratense HOM05D000002 ORTHO05D000047 3.4e-06 56.2 172 23.3
CANSAT01G2034 Cannabis sativa HOM05D000002 ORTHO05D000047 4.4e-06 55.8 140 30.7
SHI20749 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-06 55.8 91 38.5
Sopen09g007300 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-06 55.5 169 25.4
Sopen10g028000 Solanum pennellii HOM05D000002 ORTHO05D000047 5.7e-06 55.5 156 25.6
Ca_11682_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 7.5e-06 55.1 129 27.1
Hma1.2p1_0744F.1_g211780 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.5e-06 55.1 122 30.3
QL05p014573 Quercus lobata HOM05D000002 ORTHO05D000001 7.5e-06 55.1 135 25.2
Sopen03g025810 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-06 55.1 223 24.2
Sopen06g008220 Solanum pennellii HOM05D000002 ORTHO05D000047 9.8e-06 54.7 175 24.6


User provided reference genes

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