Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 4.2e-170 601.3 303 100.0
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 3.6e-166 588.2 303 98.3
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 6.2e-166 587.4 303 97.4
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 9.9e-156 553.5 301 91.0
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 2.6e-140 502.3 301 81.4
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 4.5e-140 501.5 301 82.1
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 5.9e-140 501.1 303 82.2
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 1.0e-139 500.4 251 99.6
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.7e-139 499.6 303 80.9
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 6.5e-139 497.7 303 81.8
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 1.9e-138 496.1 301 79.7
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 5.5e-138 494.6 303 80.2
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 1.6e-137 493.0 303 79.2
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 2.1e-137 492.7 302 80.1
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 2.7e-137 492.3 301 80.4
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 4.6e-137 491.5 303 79.5
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 6.1e-137 491.1 301 80.1
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 1.0e-136 490.3 303 78.5
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 1.8e-136 489.6 303 78.9
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 3.0e-136 488.8 303 78.5
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 3.0e-136 488.8 303 78.5
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 3.9e-136 488.4 301 79.4
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 5.1e-136 488.0 303 78.9
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 6.7e-136 487.6 302 80.1
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 1.9e-135 486.1 299 79.6
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 1.9e-135 486.1 303 76.6
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 2.5e-135 485.7 303 79.9
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 5.7e-135 484.6 301 78.7
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 7.4e-135 484.2 299 79.6
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 9.7e-135 483.8 303 78.9
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 9.7e-135 483.8 303 77.9
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 1.6e-134 483.0 303 77.6
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 1.6e-134 483.0 303 77.6
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 2.2e-134 482.6 303 79.2
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 2.8e-134 482.3 295 79.3
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 3.7e-134 481.9 303 79.5
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 4.8e-134 481.5 303 79.5
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 4.8e-134 481.5 303 78.5
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 4.8e-134 481.5 301 78.7
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 8.2e-134 480.7 303 78.5
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.8e-133 479.6 303 78.9
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 2.4e-133 479.2 303 79.2
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 2.4e-133 479.2 303 77.2
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 3.1e-133 478.8 301 77.7
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 5.3e-133 478.0 301 78.1
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 5.3e-133 478.0 301 78.1
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 9.1e-133 477.2 301 77.7
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 2.0e-132 476.1 300 77.3
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.0e-132 476.1 303 78.2
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 2.6e-132 475.7 301 78.1
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 3.4e-132 475.3 301 77.7
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 4.5e-132 474.9 303 78.9
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 5.9e-132 474.6 299 78.3
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 5.9e-132 474.6 301 78.1
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 7.7e-132 474.2 303 78.2
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 7.7e-132 474.2 303 78.2
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 2.2e-131 472.6 299 78.3
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 2.1e-129 466.1 303 76.9
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 3.9e-128 461.8 306 75.5
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 1.1e-127 460.3 303 76.6
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 2.0e-127 459.5 303 73.6
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 2.6e-127 459.1 301 73.4
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 2.6e-127 459.1 303 74.9
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 5.7e-127 458.0 301 76.7
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 6.3e-126 454.5 293 76.1
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.4e-125 453.4 305 75.4
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 7.7e-124 447.6 301 73.1
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 7.7e-124 447.6 306 73.9
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 1.0e-123 447.2 305 73.8
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 3.2e-122 442.2 301 70.8
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 5.5e-122 441.4 300 73.3
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 5.5e-122 441.4 300 73.7
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 2.1e-121 439.5 311 70.7
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 4.7e-121 438.3 300 73.3
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 4.7e-121 438.3 306 72.9
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 6.1e-121 438.0 300 73.3
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 6.1e-121 438.0 300 73.0
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 7.9e-121 437.6 306 73.2
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 1.4e-120 436.8 300 72.7
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 1.4e-120 436.8 300 71.3
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 1.8e-120 436.4 300 71.3
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 1.8e-120 436.4 300 73.0
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 1.8e-120 436.4 300 73.0
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 3.9e-120 435.3 305 73.8
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 1.5e-119 433.3 287 73.2
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 2.0e-119 433.0 300 71.0
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 2.0e-119 433.0 300 72.0
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 2.0e-119 433.0 234 90.2
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 7.4e-119 431.0 301 70.8
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 1.3e-118 430.3 300 72.0
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 1.7e-118 429.9 300 72.3
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 3.7e-118 428.7 300 70.7
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 3.7e-118 428.7 300 70.7
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 3.7e-118 428.7 300 70.7
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.2e-116 423.7 261 82.0
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 2.6e-116 422.5 300 71.0
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 2.6e-116 422.5 303 70.0
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 1.5e-114 416.8 275 75.6
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 1.5e-111 406.8 249 79.5
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 1.0e-104 384.0 302 65.2
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 7.0e-101 371.3 299 61.9
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 9.1e-101 370.9 221 80.5
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 5.9e-100 368.2 305 61.6
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.3e-99 367.1 225 78.2
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 1.1e-98 364.0 225 78.7
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 1.4e-96 357.1 215 80.0
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 1.4e-96 357.1 235 73.6
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 3.7e-94 349.0 219 79.0
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 8.3e-94 347.8 248 68.5
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 1.5e-90 337.0 277 62.1
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 2.8e-89 332.8 254 65.0
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 2.8e-81 306.2 301 56.1
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 5.4e-77 292.0 339 49.6
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 1.8e-72 276.9 173 74.6
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 2.1e-60 236.9 317 44.5
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 6.4e-54 215.3 143 76.2
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 1.1e-48 198.0 163 62.6
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 2.7e-44 183.3 343 37.0
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 5.1e-43 179.1 303 40.3
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 8.1e-41 171.8 177 53.1
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 9.3e-37 158.3 112 72.3
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 4.3e-34 149.4 91 79.1
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 1.7e-30 137.5 88 70.5
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 4.2e-29 132.9 94 70.2
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 1.8e-27 127.5 351 32.2
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 8.2e-25 118.6 86 70.9
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 2.4e-24 117.1 134 51.5
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 7.6e-23 112.1 72 73.6
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 1.5e-15 87.8 64 71.9
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 4.5e-15 86.3 61 57.4
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 6.5e-14 82.4 52 73.1


User provided reference genes

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