Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 2.2e-87 327.4 578 100.0
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 8.4e-87 325.5 578 99.7
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 5.1e-76 289.7 578 92.4
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 6.9e-65 252.7 574 89.5
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 1.3e-63 248.4 572 88.8
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 2.7e-61 240.7 585 92.5
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 3.0e-60 237.3 430 91.6
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 1.3e-34 152.1 127 61.4
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 7.0e-33 146.4 128 58.6
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 9.1e-33 146.0 428 82.0
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 1.6e-32 145.2 127 59.8
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 1.0e-31 142.5 128 57.0
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 5.5e-30 136.7 128 55.5
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 1.2e-29 135.6 128 50.8
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 1.2e-29 135.6 128 50.8
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 1.6e-29 135.2 128 51.6
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 4.7e-29 133.7 128 50.8
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 8.0e-29 132.9 129 55.0
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 1.0e-28 132.5 128 53.1
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 1.4e-28 132.1 128 52.3
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 1.8e-28 131.7 128 54.7
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 1.8e-28 131.7 126 56.3
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 1.8e-28 131.7 125 55.2
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 2.3e-28 131.3 128 53.1
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 4.0e-28 130.6 128 53.9
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 6.8e-28 129.8 128 53.1
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 8.8e-28 129.4 127 50.4
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 8.8e-28 129.4 127 50.4
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 8.8e-28 129.4 129 52.7
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 8.8e-28 129.4 128 53.1
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 1.5e-27 128.6 128 48.4
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 1.5e-27 128.6 128 52.3
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 2.6e-27 127.9 127 55.1
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 4.4e-27 127.1 128 49.2
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 4.4e-27 127.1 128 48.4
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 4.4e-27 127.1 130 51.5
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 5.7e-27 126.7 127 52.8
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 5.7e-27 126.7 127 52.8
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 5.7e-27 126.7 127 52.8
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 7.5e-27 126.3 128 50.8
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 9.8e-27 125.9 127 51.2
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 9.8e-27 125.9 121 53.7
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 1.3e-26 125.6 127 52.8
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 1.3e-26 125.6 127 52.8
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.3e-26 125.6 127 52.8
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.8e-26 124.4 128 51.6
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 2.8e-26 124.4 130 51.5
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 4.8e-26 123.6 127 51.2
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 1.1e-25 122.5 120 50.0
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 2.4e-25 121.3 129 52.7
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 4.1e-25 120.6 127 48.0
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 4.1e-25 120.6 128 52.3
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 9.1e-25 119.4 121 51.2
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 1.2e-24 119.0 130 51.5
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 3.5e-24 117.5 128 46.1
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 4.5e-24 117.1 121 50.4
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 5.9e-24 116.7 130 50.0
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 7.7e-24 116.3 121 50.4
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 7.7e-24 116.3 70 72.9
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 7.7e-24 116.3 100 57.0
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 1.3e-23 115.5 129 50.4
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 1.7e-23 115.2 127 47.2
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 1.7e-23 115.2 134 49.3
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 2.3e-23 114.8 100 56.0
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 2.9e-23 114.4 123 48.8
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 3.8e-23 114.0 121 49.6
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 5.0e-23 113.6 130 49.2
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 5.0e-23 113.6 127 48.0
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 1.1e-22 112.5 121 47.1
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 1.5e-22 112.1 134 48.5
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 1.9e-22 111.7 127 44.9
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 9.5e-22 109.4 126 50.0
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 9.5e-22 109.4 129 48.8
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 4.7e-21 107.1 123 44.7
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 1.0e-20 105.9 127 48.0
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 1.0e-20 105.9 131 46.6
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 6.8e-20 103.2 71 64.8
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 6.8e-20 103.2 129 45.7
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 6.8e-20 103.2 132 45.5
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 5.7e-19 100.1 124 45.2
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 1.3e-18 99.0 124 42.7
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 3.7e-18 97.4 126 47.6
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 6.3e-18 96.7 125 44.8
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 9.2e-17 92.8 62 66.1
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 2.0e-16 91.7 141 41.8
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 2.0e-16 91.7 129 44.2
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 4.5e-16 90.5 140 41.4
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 5.9e-16 90.1 141 41.8
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 1.3e-15 89.0 136 41.9
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 2.9e-15 87.8 140 41.4
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 5.0e-15 87.0 125 41.6
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 5.0e-15 87.0 131 41.2
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 5.0e-15 87.0 125 41.6
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 6.6e-15 86.7 131 41.2
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 6.6e-15 86.7 143 39.2
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 3.3e-14 84.3 129 41.1
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 1.6e-13 82.0 138 39.9
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 2.1e-13 81.6 138 40.6
SalBow8G1439 Salvia bowleyana HOM05D006918 ORTHO05D008525 8.0e-13 79.7 50 76.0
Cfa019933 Carpinus fangiana HOM05D006918 ORTHO05D008525 1.8e-12 78.6 50 68.0
CDE12G0330 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 9.8e-11 72.8 49 69.4
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 2.2e-10 71.6 99 39.4
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 6.4e-10 70.1 129 36.4
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 1.4e-09 68.9 41 73.2
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 4.1e-09 67.4 129 36.4
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 2.0e-08 65.1 108 37.0
BcaC08g47471 Brassica carinata HOM05D006918 ORTHO05D008525 1.0e-07 62.8 55 52.7
FAN16G1729 Fragaria x ananassa HOM05D006918 ORTHO05D008525 5.6e-06 57.0 39 61.5
ECA240G0851 Erigeron canadensis HOM05D006918 ORTHO05D008525 9.5e-06 56.2 33 78.8


User provided reference genes

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