Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g027330 Solanum pennellii HOM05D011296 ORTHO05D013264 4.6e-186 655.2 578 100.0
Solyc07g053360.4 Solanum lycopersicum HOM05D011296 ORTHO05D013264 1.0e-132 478.0 579 76.0
PGSC0003DMG400019976 Solanum tuberosum HOM05D011296 ORTHO05D013264 3.5e-101 373.2 553 74.5
CAN.G1360.5 Capsicum annuum HOM05D011296 ORTHO05D013264 1.5e-56 224.9 610 53.1
Nitab4.5_0014887g0020 Nicotiana tabacum HOM05D011296 ORTHO05D013264 3.6e-45 187.2 630 47.0
Nitab4.5_0008704g0010 Nicotiana tabacum HOM05D011296 ORTHO05D013264 1.1e-41 175.6 265 46.8
Peaxi162Scf00469g00010 Petunia axillaris HOM05D011296 ORTHO05D010442 2.3e-36 157.9 623 40.4
Hma1.2p1_0178F.1_g079010 Hydrangea macrophylla HOM05D011296 ORTHO05D013264 3.6e-21 107.5 192 42.2
Peaxi162Scf00241g00914 Petunia axillaris HOM05D011296 ORTHO05D018888 6.1e-21 106.7 218 38.1
Lsat_1_v5_gn_8_139801 Lactuca sativa HOM05D008991 ORTHO05D010442 1.5e-19 102.1 194 41.2
Peaxi162Scf00384g00512 Petunia axillaris HOM05D011296 ORTHO05D022206 1.4e-17 95.5 167 44.9
Nitab4.5_0002674g0020 Nicotiana tabacum HOM05D011296 ORTHO05D013264 1.2e-16 92.4 101 54.5
Oeu036098.1 Olea europaea HOM05D008991 ORTHO05D010442 3.5e-16 90.9 192 38.5
Sc21g0003130 Simmondsia chinensis HOM05D011296 ORTHO05D013264 4.5e-16 90.5 258 35.3
Dinv15461 Davidia involucrata HOM05D008991 ORTHO05D010442 7.8e-16 89.7 192 39.1
Nitab4.5_0000822g0060 Nicotiana tabacum HOM05D022155 ORTHO05D018888 7.3e-14 83.2 191 36.1
Actinidia30443 Actinidia chinensis HOM05D008991 ORTHO05D010442 1.6e-13 82.0 159 39.6
AT2G42560 Arabidopsis thaliana HOM05D008991 ORTHO05D010442 1.0e-12 79.3 157 41.4
Migut.H02156 Erythranthe guttata HOM05D008991 ORTHO05D010442 1.0e-12 79.3 159 40.3
Sp4g24690 Schrenkiella parvula HOM05D008991 ORTHO05D010442 1.4e-12 79.0 157 39.5
PGR142G1329 Punica granatum HOM05D008991 ORTHO05D010442 5.2e-12 77.0 189 33.9
CiPaw.03G186100 Carya illinoinensis HOM05D008991 ORTHO05D010442 2.6e-11 74.7 194 36.6
Carub.0004s2501 Capsella rubella HOM05D008991 ORTHO05D010442 9.8e-11 72.8 157 38.9
A04p32280 Brassica napus HOM05D008991 ORTHO05D010442 2.2e-10 71.6 158 39.2
BraA04t18682Z Brassica rapa HOM05D008991 ORTHO05D010442 2.2e-10 71.6 158 39.2
CARHR137700 Cardamine hirsuta HOM05D008991 ORTHO05D010442 2.2e-10 71.6 158 41.1
PSO541G0331 Papaver somniferum HOM05D065359 ORTHO05D050182 2.2e-10 71.6 252 29.4
BolC4t28480H Brassica oleracea HOM05D008991 ORTHO05D010442 2.9e-10 71.2 171 37.4
MBI06_g18002_MAGBIO Magnolia biondii HOM05D037798 ORTHO05D013264 2.9e-10 71.2 65 56.9
MBI06_g45388_MAGBIO Magnolia biondii HOM05D037798 ORTHO05D013264 2.9e-10 71.2 65 56.9
AL4G41110 Arabidopsis lyrata HOM05D008991 ORTHO05D010442 3.7e-10 70.9 157 38.9
Potri.019G090300 Populus trichocarpa HOM05D026498 ORTHO05D010442 4.9e-10 70.5 173 34.7
BcaC02g07231 Brassica carinata HOM05D008991 ORTHO05D010442 6.4e-10 70.1 171 36.8
C04p69790 Brassica napus HOM05D008991 ORTHO05D010442 6.4e-10 70.1 171 36.8
CiPaw.04G131500 Carya illinoinensis HOM05D008991 ORTHO05D010442 6.4e-10 70.1 193 34.7
BcaB01g03456 Brassica carinata HOM05D008991 ORTHO05D010442 1.4e-09 68.9 191 36.1
Sed0024903 Sechium edule HOM05D024384 ORTHO05D010442 1.9e-09 68.6 208 32.7
Cfa014713 Carpinus fangiana HOM05D008991 ORTHO05D010442 9.2e-09 66.2 202 33.7
Cc05_g08110 Coffea canephora HOM05D008991 ORTHO05D010442 9.2e-09 66.2 157 36.9
Aa31LG1G24360 Aethionema arabicum HOM05D008991 ORTHO05D010442 1.2e-08 65.9 193 33.2
Haze_13344 Corylus avellana HOM05D008991 ORTHO05D010442 1.2e-08 65.9 182 33.0
HPP92_008741 Vanilla planifolia HOM05D039233 ORTHO05D013264 1.2e-08 65.9 90 44.4
MELO3C019755.2 Cucumis melo HOM05D024384 ORTHO05D010442 1.6e-08 65.5 184 29.3
Cpa.g.sc209.19 Carica papaya HOM05D008991 ORTHO05D010442 2.0e-08 65.1 170 37.1
CSS0046433 Camellia sinensis var. sinensis HOM05D011296 ORTHO05D013264 2.7e-08 64.7 97 46.4
Rhsim04G0073600 Rhododendron simsii HOM05D011296 ORTHO05D013264 2.7e-08 64.7 78 50.0
BcaB06g29254 Brassica carinata HOM05D008991 ORTHO05D010442 3.5e-08 64.3 188 34.0
Sabra19G0104000 Salix brachista HOM05D026498 ORTHO05D010442 3.5e-08 64.3 163 34.4
Sabra19G0100600 Salix brachista HOM05D026498 ORTHO05D010442 4.6e-08 63.9 170 34.7
Hund00983 Selenicereus undatus HOM05D024247 ORTHO05D019537 1.0e-07 62.8 284 26.8
QL08p041343 Quercus lobata HOM05D008991 ORTHO05D010442 1.3e-07 62.4 237 31.6
CANSAT64G0119 Cannabis sativa HOM05D008991 ORTHO05D010442 2.3e-07 61.6 211 33.2
Nn1g09059 Nelumbo nucifera HOM05D011296 ORTHO05D013264 8.6e-07 59.7 88 47.7
ECA233G2256 Erigeron canadensis HOM05D011296 ORTHO05D010442 1.5e-06 58.9 168 35.1
CsaV3_6G018720 Cucumis sativus L. HOM05D024384 ORTHO05D010442 2.5e-06 58.2 182 30.8
Lj1A689G19 Lonicera japonica HOM05D011296 ORTHO05D010442 2.5e-06 58.2 171 32.2
Potri.013G118600 Populus trichocarpa HOM05D026498 ORTHO05D010442 2.5e-06 58.2 172 32.0
EL10Ac9g20880 Beta vulgaris HOM05D024247 ORTHO05D019537 5.6e-06 57.0 238 30.7
SalBow7G0518 Salvia bowleyana HOM05D008991 ORTHO05D010442 5.6e-06 57.0 228 47.4
BcaNung03228 Brassica carinata HOM05D008991 ORTHO05D010442 9.5e-06 56.2 172 34.9
PGR142G3325 Punica granatum HOM05D020995 ORTHO05D010442 9.5e-06 56.2 173 32.4


User provided reference genes

Program Settings