Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g026420 Solanum pennellii HOM05D000538 ORTHO05D012213 3.1e-63 245.0 125 100.0
Solyc07g052870.2 Solanum lycopersicum HOM05D000538 ORTHO05D012213 2.3e-58 228.8 123 95.9
Solyc07g052830.4 Solanum lycopersicum HOM05D000538 ORTHO05D012213 6.8e-42 174.1 101 87.1
Solyc07g052760.3 Solanum lycopersicum HOM05D000538 ORTHO05D012213 1.7e-40 169.5 101 85.1
PGSC0003DMG400026193 Solanum tuberosum HOM05D000538 ORTHO05D012213 1.7e-40 169.5 101 84.2
PGSC0003DMG400026195 Solanum tuberosum HOM05D000538 ORTHO05D012213 1.1e-39 166.8 100 86.0
Solyc07g052750.1 Solanum lycopersicum HOM05D000538 ORTHO05D012213 4.1e-39 164.9 99 84.8
PGSC0003DMG400026206 Solanum tuberosum HOM05D000538 ORTHO05D012213 4.1e-39 164.9 101 86.1
Sopen07g026380 Solanum pennellii HOM05D000538 ORTHO05D012213 5.4e-39 164.5 101 83.2
Solyc07g052900.1 Solanum lycopersicum HOM05D000538 ORTHO05D000614 1.2e-38 163.3 101 82.2
Sopen07g026390 Solanum pennellii HOM05D000538 ORTHO05D012213 1.2e-38 163.3 92 88.0
Sopen07g026450 Solanum pennellii HOM05D000538 ORTHO05D012213 1.2e-38 163.3 101 82.2
PGSC0003DMG400026196 Solanum tuberosum HOM05D000538 ORTHO05D000614 2.0e-38 162.5 101 80.2
Solyc07g052860.3 Solanum lycopersicum HOM05D000538 ORTHO05D012213 3.5e-38 161.8 99 82.8
Sopen07g026410 Solanum pennellii HOM05D000538 ORTHO05D012213 1.7e-37 159.5 98 82.7
Sopen07g026360 Solanum pennellii HOM05D000538 ORTHO05D012213 3.8e-37 158.3 101 79.2
Sopen07g026370 Solanum pennellii HOM05D000538 ORTHO05D012213 2.8e-35 152.1 101 80.2
CAN.G86.22 Capsicum annuum HOM05D000538 ORTHO05D000614 3.1e-31 138.7 103 68.9
Nitab4.5_0001134g0160 Nicotiana tabacum HOM05D000538 ORTHO05D000614 2.3e-26 122.5 103 64.1
Nitab4.5_0003429g0050 Nicotiana tabacum HOM05D000538 ORTHO05D000614 4.0e-26 121.7 100 66.0
Peaxi162Scf00007g00141 Petunia axillaris HOM05D000538 ORTHO05D000614 1.5e-25 119.8 102 62.7
CAN.G492.89 Capsicum annuum HOM05D000538 ORTHO05D012213 5.8e-25 117.9 97 62.9
Solyc07g052820.1 Solanum lycopersicum HOM05D000538 ORTHO05D012213 6.4e-24 114.4 66 86.4
CAN.G150.1 Capsicum annuum HOM05D000538 ORTHO05D012213 1.1e-23 113.6 101 57.4
CAN.G2015.5 Capsicum annuum HOM05D000538 ORTHO05D012213 7.0e-23 110.9 101 56.4
Dinv18544 Davidia involucrata HOM05D000538 ORTHO05D000614 8.1e-11 70.9 103 40.8
Lj8P121T27 Lonicera japonica HOM05D000538 ORTHO05D000614 5.2e-10 68.2 99 41.4
Rhsim06G0156300 Rhododendron simsii HOM05D000538 ORTHO05D000614 8.9e-10 67.4 121 38.0
Nitab4.5_0000780g0050 Nicotiana tabacum HOM05D000538 ORTHO05D012213 1.2e-09 67.0 111 38.7
Cpa.g.sc8.251 Carica papaya HOM05D000538 ORTHO05D000614 5.8e-09 64.7 103 38.8
MSTRG.14159 Avicennia marina HOM05D000538 ORTHO05D000614 7.5e-09 64.3 94 43.6
Lju1220C3T4 Lonicera japonica HOM05D000538 ORTHO05D000614 2.9e-08 62.4 120 38.3
Actinidia24277 Actinidia chinensis HOM05D000538 ORTHO05D000614 8.3e-08 60.8 91 40.7
CSS0022087 Camellia sinensis var. sinensis HOM05D000538 ORTHO05D000614 1.4e-07 60.1 102 38.2
CAN.G6565.1 Capsicum annuum HOM05D000538 ORTHO05D012213 1.4e-07 60.1 45 62.2
Lju114C4T13 Lonicera japonica HOM05D000538 ORTHO05D000614 2.4e-07 59.3 89 43.8
MD09G1103400 Malus domestica HOM05D000538 ORTHO05D000614 3.2e-07 58.9 101 39.6
Sed0007057 Sechium edule HOM05D000538 ORTHO05D000614 3.2e-07 58.9 101 36.6
Sed0002193 Sechium edule HOM05D000538 ORTHO05D000614 5.4e-07 58.2 96 37.5
ClCG02G001630 Citrullus lanatus HOM05D000538 ORTHO05D000614 9.2e-07 57.4 95 36.8
Rhsim11G0032500 Rhododendron simsii HOM05D000538 ORTHO05D000614 9.2e-07 57.4 81 40.7
RhsimUnG0059200 Rhododendron simsii HOM05D000538 ORTHO05D000614 9.2e-07 57.4 81 40.7
vmacro12238 Vaccinium macrocarpon HOM05D000538 ORTHO05D000614 9.2e-07 57.4 85 43.5
Solyc07g052740.3 Solanum lycopersicum HOM05D000538 ORTHO05D012213 1.2e-06 57.0 36 75.0
Sc21g0001810 Simmondsia chinensis HOM05D000538 ORTHO05D000614 1.6e-06 56.6 99 38.4
Prupe.3G222100 Prunus persica HOM05D000538 ORTHO05D000614 2.1e-06 56.2 89 38.2
Hma1.2p1_0439F.1_g153220 Hydrangea macrophylla HOM05D000538 ORTHO05D000614 4.6e-06 55.1 54 53.7
Actinidia12491 Actinidia chinensis HOM05D000538 ORTHO05D000614 6.0e-06 54.7 50 48.0
RcHm_v2.0_Chr2g0160351 Rosa chinensis HOM05D000538 ORTHO05D000614 6.0e-06 54.7 100 34.0
MELO3C018793.2 Cucumis melo HOM05D000538 ORTHO05D000614 7.8e-06 54.3 96 34.4
Hma1.2p1_0613F.1_g189370 Hydrangea macrophylla HOM05D000538 ORTHO05D000614 7.8e-06 54.3 87 41.4


User provided reference genes

Program Settings