Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g026370 Solanum pennellii HOM05D000538 ORTHO05D012213 1.9e-47 192.2 100 100.0
Solyc07g052750.1 Solanum lycopersicum HOM05D000538 ORTHO05D012213 6.4e-43 177.2 103 92.2
Solyc07g052860.3 Solanum lycopersicum HOM05D000538 ORTHO05D012213 1.2e-41 172.9 102 91.2
Sopen07g026410 Solanum pennellii HOM05D000538 ORTHO05D012213 1.2e-41 172.9 102 91.2
PGSC0003DMG400026206 Solanum tuberosum HOM05D000538 ORTHO05D012213 8.9e-37 156.8 104 83.7
Solyc07g052760.3 Solanum lycopersicum HOM05D000538 ORTHO05D012213 1.2e-36 156.4 101 82.2
PGSC0003DMG400026195 Solanum tuberosum HOM05D000538 ORTHO05D012213 3.4e-36 154.8 104 80.8
Solyc07g052830.4 Solanum lycopersicum HOM05D000538 ORTHO05D012213 7.6e-36 153.7 104 80.8
Sopen07g026420 Solanum pennellii HOM05D000538 ORTHO05D012213 2.2e-35 152.1 101 80.2
Sopen07g026380 Solanum pennellii HOM05D000538 ORTHO05D012213 2.9e-35 151.8 101 80.2
PGSC0003DMG400026193 Solanum tuberosum HOM05D000538 ORTHO05D012213 4.9e-35 151.0 101 79.2
PGSC0003DMG400026196 Solanum tuberosum HOM05D000538 ORTHO05D000614 3.2e-34 148.3 104 75.0
Solyc07g052900.1 Solanum lycopersicum HOM05D000538 ORTHO05D000614 7.1e-34 147.1 104 76.0
Sopen07g026450 Solanum pennellii HOM05D000538 ORTHO05D012213 7.1e-34 147.1 104 76.0
Sopen07g026390 Solanum pennellii HOM05D000538 ORTHO05D012213 2.1e-33 145.6 92 79.3
Sopen07g026360 Solanum pennellii HOM05D000538 ORTHO05D012213 3.5e-33 144.8 103 74.8
Solyc07g052870.2 Solanum lycopersicum HOM05D000538 ORTHO05D012213 1.1e-31 139.8 100 76.0
CAN.G86.22 Capsicum annuum HOM05D000538 ORTHO05D000614 4.0e-29 131.3 104 67.3
Nitab4.5_0003429g0050 Nicotiana tabacum HOM05D000538 ORTHO05D000614 2.7e-25 118.6 106 62.3
Solyc07g052820.1 Solanum lycopersicum HOM05D000538 ORTHO05D012213 6.0e-25 117.5 66 87.9
Peaxi162Scf00007g00141 Petunia axillaris HOM05D000538 ORTHO05D000614 1.3e-24 116.3 105 63.8
Nitab4.5_0001134g0160 Nicotiana tabacum HOM05D000538 ORTHO05D000614 3.0e-24 115.2 103 63.1
CAN.G492.89 Capsicum annuum HOM05D000538 ORTHO05D012213 3.1e-21 105.1 91 57.1
CAN.G150.1 Capsicum annuum HOM05D000538 ORTHO05D012213 5.8e-20 100.9 102 52.9
CAN.G2015.5 Capsicum annuum HOM05D000538 ORTHO05D012213 3.8e-19 98.2 102 52.0
Dinv18544 Davidia involucrata HOM05D000538 ORTHO05D000614 9.3e-10 67.0 98 40.8
Nitab4.5_0000780g0050 Nicotiana tabacum HOM05D000538 ORTHO05D012213 9.3e-10 67.0 103 42.7
Lj8P121T27 Lonicera japonica HOM05D000538 ORTHO05D000614 2.3e-08 62.4 95 40.0
MSTRG.14159 Avicennia marina HOM05D000538 ORTHO05D000614 3.0e-08 62.0 100 43.0
Cpa.g.sc8.251 Carica papaya HOM05D000538 ORTHO05D000614 3.9e-08 61.6 101 40.6
Rhsim06G0156300 Rhododendron simsii HOM05D000538 ORTHO05D000614 1.5e-07 59.7 98 40.8
CAN.G6565.1 Capsicum annuum HOM05D000538 ORTHO05D012213 5.7e-07 57.8 45 57.8
Sed0007057 Sechium edule HOM05D000538 ORTHO05D000614 5.7e-07 57.8 97 39.2
ClCG02G001630 Citrullus lanatus HOM05D000538 ORTHO05D000614 9.6e-07 57.0 80 40.0
vmacro12238 Vaccinium macrocarpon HOM05D000538 ORTHO05D000614 1.6e-06 56.2 85 41.2
Actinidia12491 Actinidia chinensis HOM05D000538 ORTHO05D000614 2.8e-06 55.5 50 50.0
Rhsim11G0032500 Rhododendron simsii HOM05D000538 ORTHO05D000614 2.8e-06 55.5 107 36.4
RhsimUnG0059200 Rhododendron simsii HOM05D000538 ORTHO05D000614 2.8e-06 55.5 107 36.4
RcHm_v2.0_Chr2g0160351 Rosa chinensis HOM05D000538 ORTHO05D000614 2.8e-06 55.5 95 36.8
MD09G1103400 Malus domestica HOM05D000538 ORTHO05D000614 3.7e-06 55.1 88 43.2
SalBow1G6852 Salvia bowleyana HOM05D000538 ORTHO05D000614 3.7e-06 55.1 94 38.3
MELO3C018793.2 Cucumis melo HOM05D000538 ORTHO05D000614 4.8e-06 54.7 80 38.8
Rhsim11G0046900 Rhododendron simsii HOM05D000538 ORTHO05D000614 4.8e-06 54.7 91 37.4
Dinv10905 Davidia involucrata HOM05D000538 ORTHO05D000614 8.2e-06 53.9 95 36.8
Sed0002193 Sechium edule HOM05D000538 ORTHO05D000614 8.2e-06 53.9 96 36.5


User provided reference genes

Program Settings