Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 2.7e-205 718.4 352 100.0
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 1.9e-203 712.2 352 98.6
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 1.3e-199 699.5 356 96.6
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 6.1e-197 690.6 351 95.2
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 6.9e-193 677.2 353 93.8
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 2.5e-187 658.7 351 92.3
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 6.5e-183 644.0 333 94.3
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 1.2e-163 580.1 351 81.2
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 7.0e-161 570.9 351 79.2
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 2.0e-160 569.3 350 78.6
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 2.1e-157 559.3 350 77.7
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 3.6e-157 558.5 347 78.4
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 3.6e-157 558.5 350 78.6
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 1.4e-156 556.6 349 78.8
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 6.8e-156 554.3 348 78.4
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 6.8e-156 554.3 347 78.4
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 1.5e-155 553.1 377 74.0
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 2.0e-155 552.7 345 78.3
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 2.0e-155 552.7 351 78.1
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 3.4e-155 552.0 347 77.2
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 4.4e-155 551.6 351 76.6
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 7.5e-155 550.8 351 77.2
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 7.5e-155 550.8 351 77.2
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 7.5e-155 550.8 351 76.4
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 9.8e-155 550.4 351 76.6
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 6.3e-154 547.7 349 76.8
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 2.7e-152 542.3 345 76.8
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 5.9e-152 541.2 352 76.1
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 5.9e-152 541.2 345 75.9
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 5.9e-152 541.2 348 76.1
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 1.0e-151 540.4 345 76.8
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.0e-151 540.4 346 76.3
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 1.3e-151 540.0 351 75.8
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 1.3e-151 540.0 345 76.8
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 1.3e-151 540.0 351 75.2
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 1.7e-151 539.7 358 76.3
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 2.9e-151 538.9 345 76.8
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 8.6e-151 537.3 351 73.8
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 9.5e-150 533.9 350 76.9
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 6.8e-148 527.7 350 74.6
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 6.8e-148 527.7 351 73.2
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 1.2e-147 526.9 325 79.1
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 3.4e-147 525.4 354 74.0
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 3.4e-147 525.4 349 73.9
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 7.5e-147 524.2 353 73.7
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 3.7e-146 521.9 357 73.1
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 1.4e-145 520.0 349 73.1
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 1.8e-145 519.6 347 72.9
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 1.8e-145 519.6 365 71.5
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 5.4e-145 518.1 349 73.1
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 7.0e-145 517.7 347 72.6
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 1.2e-144 516.9 332 76.2
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 1.6e-144 516.5 350 72.6
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 1.0e-143 513.8 331 75.8
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 2.9e-143 512.3 349 73.1
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 6.6e-143 511.1 355 72.4
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 1.5e-142 510.0 350 72.9
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 2.5e-142 509.2 350 72.9
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 3.3e-142 508.8 324 77.8
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 7.3e-142 507.7 352 73.6
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 2.8e-141 505.8 351 71.8
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 4.7e-141 505.0 332 74.4
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 2.3e-140 502.7 350 71.7
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 2.3e-140 502.7 352 72.2
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 8.9e-140 500.7 352 71.9
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 5.8e-139 498.0 351 72.4
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 7.5e-139 497.7 347 71.8
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 1.3e-138 496.9 347 71.2
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 2.2e-138 496.1 353 71.1
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 2.2e-138 496.1 349 72.5
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 2.9e-138 495.7 332 73.8
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 3.7e-138 495.4 353 70.0
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 3.7e-138 495.4 330 76.1
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 6.4e-138 494.6 330 74.5
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 1.4e-137 493.4 377 67.4
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 7.0e-137 491.1 323 75.5
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 2.7e-136 489.2 301 79.4
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 4.6e-136 488.4 347 69.7
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 1.0e-135 487.3 405 63.5
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 1.0e-135 487.3 326 72.4
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 1.0e-135 487.3 345 71.6
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 1.7e-135 486.5 328 73.8
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 5.6e-134 481.5 372 65.9
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 9.5e-134 480.7 347 68.9
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 6.2e-133 478.0 324 72.5
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 1.8e-132 476.5 321 72.0
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 2.3e-132 476.1 351 70.7
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 1.2e-131 473.8 353 66.0
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 1.5e-131 473.4 349 69.9
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 2.0e-131 473.0 333 72.1
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 5.8e-131 471.5 326 69.9
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 7.5e-131 471.1 340 70.9
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 9.8e-131 470.7 325 71.7
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 1.7e-130 469.9 344 66.6
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 1.7e-130 469.9 339 69.0
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 2.2e-130 469.5 331 71.9
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 1.9e-129 466.5 369 66.1
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 3.2e-129 465.7 345 69.0
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 4.1e-129 465.3 327 70.6
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 5.4e-129 464.9 327 70.0
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 1.2e-128 463.8 330 70.0
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 2.1e-128 463.0 328 69.8
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 2.1e-128 463.0 320 70.6
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 4.6e-128 461.8 320 70.3
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 4.6e-128 461.8 350 66.9
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 4.6e-128 461.8 345 67.5
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 6.0e-128 461.5 349 66.2
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 6.0e-128 461.5 330 69.7
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 6.0e-128 461.5 330 68.8
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 7.8e-128 461.1 341 67.4
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 1.0e-127 460.7 321 70.4
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 1.1e-126 457.2 350 66.0
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 1.5e-126 456.8 350 66.0
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.5e-126 456.8 313 72.2
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 4.3e-126 455.3 327 70.0
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 2.1e-125 453.0 373 63.3
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 3.6e-125 452.2 350 67.1
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 3.1e-124 449.1 305 73.8
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 5.2e-124 448.4 353 63.5
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 4.4e-123 445.3 263 81.4
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 4.4e-123 445.3 325 69.2
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 7.6e-123 444.5 315 70.2
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 3.2e-121 439.1 278 78.4
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 7.1e-121 438.0 330 65.8
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 9.2e-121 437.6 333 64.9
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 1.5e-118 430.3 354 63.8
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 2.1e-117 426.4 532 46.4
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 2.2e-114 416.4 350 62.0
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 3.2e-113 412.5 264 78.4
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 2.3e-111 406.4 289 73.7
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 4.3e-102 375.6 352 58.2
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 3.6e-101 372.5 228 79.8
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 3.1e-100 369.4 345 54.5
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 4.0e-100 369.0 336 56.5
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 1.0e-90 337.8 280 63.6
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 2.2e-90 336.7 290 57.9
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 5.5e-89 332.0 242 66.5
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 4.8e-85 318.9 206 77.2
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 8.2e-85 318.2 267 62.9
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 5.9e-83 312.0 233 69.1
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 8.4e-82 308.1 201 75.6
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 2.0e-75 287.0 258 60.1
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.4e-73 280.8 189 75.1
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 6.1e-72 275.4 163 82.2
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 2.7e-64 250.0 375 40.5
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 3.7e-61 239.6 160 73.8
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 2.4e-60 236.9 188 63.8
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 9.1e-60 235.0 212 58.5
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.0e-58 231.5 163 70.6
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 5.5e-57 225.7 190 65.3
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 4.1e-52 209.5 147 70.1
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 2.7e-51 206.8 273 45.4
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 9.4e-49 198.4 328 41.2
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 1.1e-44 184.9 192 52.6
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 3.4e-38 163.3 109 73.4
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 3.5e-27 126.7 344 33.7
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 5.9e-27 125.9 273 34.8
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 1.7e-26 124.4 73 83.6
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 3.0e-26 123.6 157 45.2
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 2.5e-25 120.6 266 34.6
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 5.8e-22 109.4 127 46.5
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 1.4e-20 104.8 60 76.7
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 2.3e-18 97.4 57 73.7
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 3.9e-18 96.7 57 80.7
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 3.3e-17 93.6 60 75.0
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 6.2e-16 89.4 115 42.6
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 5.4e-12 76.3 137 38.7
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 5.6e-09 66.2 49 63.3
Cfa023540 Carpinus fangiana HOM05D000112 ORTHO05D001327 1.5e-06 58.2 55 50.9


User provided reference genes

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