Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g017160 Solanum pennellii HOM05D006224 ORTHO05D007691 1.1e-222 776.2 368 100.0
Solyc07g009170.4 Solanum lycopersicum HOM05D006224 ORTHO05D007691 1.4e-217 759.2 368 97.8
PGSC0003DMG400024204 Solanum tuberosum HOM05D006224 ORTHO05D007691 1.4e-212 742.7 368 95.4
Peaxi162Scf00560g00629 Petunia axillaris HOM05D006224 ORTHO05D007691 1.2e-166 590.1 361 79.8
Nitab4.5_0013433g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 1.4e-164 583.2 373 76.4
Nitab4.5_0002361g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 1.9e-164 582.8 371 76.8
CAN.G929.19 Capsicum annuum HOM05D006224 ORTHO05D007691 4.0e-143 511.9 275 88.0
Dinv41578 Davidia involucrata HOM05D006224 ORTHO05D007691 3.4e-142 508.8 372 66.9
Actinidia07421 Actinidia chinensis HOM05D006224 ORTHO05D007691 1.2e-139 500.4 377 66.3
Peaxi162Scf00560g00615 Petunia axillaris HOM05D006224 ORTHO05D007691 3.5e-139 498.8 320 76.2
QL02p086060 Quercus lobata HOM05D006224 ORTHO05D007691 6.7e-138 494.6 327 70.9
QL02p086023 Quercus lobata HOM05D006224 ORTHO05D007691 9.6e-137 490.7 382 63.1
Cc06_g09350 Coffea canephora HOM05D006224 ORTHO05D007691 3.7e-136 488.8 334 71.9
Cfa003290 Carpinus fangiana HOM05D006224 ORTHO05D007691 1.8e-135 486.5 327 70.0
TAR383G0021 Trochodendron aralioides HOM05D006224 ORTHO05D007691 3.1e-135 485.7 377 64.7
MD15G1189600 Malus domestica HOM05D006224 ORTHO05D007691 3.4e-134 482.3 330 70.6
Migut.K00473 Erythranthe guttata HOM05D006224 ORTHO05D007691 1.7e-133 479.9 388 61.3
Eucgr.E02819 Eucalyptus grandis HOM05D006224 ORTHO05D007691 3.8e-133 478.8 371 64.7
vmacro06195 Vaccinium macrocarpon HOM05D006224 ORTHO05D007691 1.9e-132 476.5 371 63.9
Cpa.g.sc23.139 Carica papaya HOM05D006224 ORTHO05D007691 4.2e-132 475.3 367 64.0
Manes.16G071100 Manihot esculenta HOM05D006224 ORTHO05D007691 1.6e-131 473.4 371 62.5
Hund26119 Selenicereus undatus HOM05D006224 ORTHO05D007691 5.1e-130 468.4 333 65.8
Ciclev10008608m.g Citrus clementina HOM05D006224 ORTHO05D007691 2.5e-129 466.1 328 67.4
TWI34G0303 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 5.6e-129 464.9 376 61.4
GSVIVG01015429001 Vitis vinifera HOM05D006224 ORTHO05D007691 1.6e-128 463.4 374 62.6
HanXRQChr05g0138301 Helianthus annuus HOM05D006224 ORTHO05D007691 2.1e-128 463.0 374 62.6
GSVIVG01015431001 Vitis vinifera HOM05D006224 ORTHO05D007691 2.1e-128 463.0 372 62.9
CANSAT56G1593 Cannabis sativa HOM05D006224 ORTHO05D007691 4.8e-128 461.8 373 61.1
Lsat_1_v5_gn_8_94740 Lactuca sativa HOM05D006224 ORTHO05D007691 1.1e-127 460.7 325 68.0
RcHm_v2.0_Chr2g0091041 Rosa chinensis HOM05D006224 ORTHO05D007691 2.4e-127 459.5 352 66.2
ClCG06G010400 Citrullus lanatus HOM05D006224 ORTHO05D007691 5.3e-127 458.4 376 61.7
SalBow1G0968 Salvia bowleyana HOM05D006224 ORTHO05D007691 5.3e-127 458.4 388 58.2
Sc08g0007140 Simmondsia chinensis HOM05D006224 ORTHO05D007691 5.3e-127 458.4 353 63.5
Haze_25683 Corylus avellana HOM05D006224 ORTHO05D007691 6.9e-127 458.0 365 61.9
CANSAT56G0016 Cannabis sativa HOM05D006224 ORTHO05D007691 9.0e-127 457.6 373 60.6
Thecc.09G114600 Theobroma cacao HOM05D006224 ORTHO05D007691 9.0e-127 457.6 347 65.1
CiPaw.03G235000 Carya illinoinensis HOM05D006224 ORTHO05D007691 1.5e-126 456.8 361 62.6
Rhsim03G0244800 Rhododendron simsii HOM05D006224 ORTHO05D007691 2.6e-126 456.1 417 56.8
AUR62011028 Chenopodium quinoa HOM05D006224 ORTHO05D007691 3.4e-126 455.7 338 64.2
Gohir.D08G261300 Gossypium hirsutum HOM05D006224 ORTHO05D007691 3.4e-126 455.7 350 64.9
Gorai.004G279400 Gossypium raimondii HOM05D006224 ORTHO05D007691 4.5e-126 455.3 350 64.9
FvH4_1g05360 Fragaria vesca HOM05D006224 ORTHO05D007691 1.3e-125 453.8 335 65.7
Oeu060631.1 Olea europaea HOM05D006224 ORTHO05D007691 1.3e-125 453.8 353 63.7
Sed0009228 Sechium edule HOM05D006224 ORTHO05D007691 1.3e-125 453.8 376 60.4
Gohir.A08G240600 Gossypium hirsutum HOM05D006224 ORTHO05D007691 3.8e-125 452.2 359 62.7
Atru.chr7.1298 Acer truncatum HOM05D006224 ORTHO05D007691 1.1e-124 450.7 332 65.4
Glyma.09G187600 Glycine max HOM05D006224 ORTHO05D007691 1.4e-124 450.3 328 66.2
DCAR_010440 Daucus carota HOM05D006224 ORTHO05D007691 3.2e-124 449.1 348 62.1
FAN19G0264 Fragaria x ananassa HOM05D006224 ORTHO05D007691 3.2e-124 449.1 340 64.7
MELO3C025318.2 Cucumis melo HOM05D006224 ORTHO05D007691 7.1e-124 448.0 359 62.1
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 2.1e-123 446.4 328 64.9
FAN23G1546 Fragaria x ananassa HOM05D006224 ORTHO05D007691 3.5e-123 445.7 367 60.5
Lalb_Chr14g0371331 Lupinus albus HOM05D006224 ORTHO05D007691 3.5e-123 445.7 330 64.2
Phvul.004G160700 Phaseolus vulgaris HOM05D006224 ORTHO05D007691 4.6e-123 445.3 357 61.6
ClCG00G002210 Citrullus lanatus HOM05D006224 ORTHO05D007691 7.9e-123 444.5 326 66.3
ClCG06G010410 Citrullus lanatus HOM05D006224 ORTHO05D007691 7.9e-123 444.5 326 66.3
Glyma.18G076000 Glycine max HOM05D006224 ORTHO05D007691 1.0e-122 444.1 341 63.9
CSS0033373 Camellia sinensis var. sinensis HOM05D006224 ORTHO05D007691 3.0e-122 442.6 340 65.6
FAN26G2363 Fragaria x ananassa HOM05D006224 ORTHO05D007691 5.1e-122 441.8 329 65.3
TWI34G1467 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 1.1e-121 440.7 370 58.6
arahy.Tifrunner.gnm1.ann1.X15ZNM Arachis hypogaea HOM05D006224 ORTHO05D007691 1.5e-121 440.3 331 63.4
Ciclev10008605m.g Citrus clementina HOM05D006224 ORTHO05D007691 1.5e-121 440.3 328 64.3
CsaV3_1G030820 Cucumis sativus L. HOM05D006224 ORTHO05D007691 1.5e-121 440.3 371 59.8
PGR042G0994 Punica granatum HOM05D006224 ORTHO05D007691 1.9e-121 439.9 358 61.2
PSO782G3139 Papaver somniferum HOM05D006224 ORTHO05D007691 3.3e-121 439.1 327 63.9
arahy.Tifrunner.gnm1.ann1.NKB3PQ Arachis hypogaea HOM05D006224 ORTHO05D007691 5.7e-121 438.3 333 63.4
PSO063G0773 Papaver somniferum HOM05D006224 ORTHO05D007691 1.3e-120 437.2 322 64.6
EL10Ac8g18541 Beta vulgaris HOM05D006224 ORTHO05D007691 2.8e-120 436.0 356 59.6
ATR0037G051 Amborella trichopoda HOM05D006224 ORTHO05D007691 6.3e-120 434.9 331 61.9
Aqoxy5G03788 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 6.3e-120 434.9 316 64.6
Duzib187G0885 Durio zibethinus HOM05D006224 ORTHO05D007691 6.3e-120 434.9 326 65.0
ClCG00G002580 Citrullus lanatus HOM05D006224 ORTHO05D007691 8.2e-120 434.5 368 60.3
Ca_30117_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 1.4e-119 433.7 320 64.7
Medtr6g086510 Medicago truncatula HOM05D006224 ORTHO05D007691 4.1e-119 432.2 368 59.5
AT5G19460 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 1.2e-118 430.6 334 61.7
Thhalv10013889m.g Eutrema salsugineum HOM05D006224 ORTHO05D007691 4.5e-118 428.7 364 58.0
MBI06_g04550_MAGBIO Magnolia biondii HOM05D006224 ORTHO05D007691 4.5e-118 428.7 384 55.7
Lj2g0020407 Lotus japonicus HOM05D006224 ORTHO05D007691 1.0e-117 427.6 351 60.7
Aa31LG11G5060 Aethionema arabicum HOM05D006224 ORTHO05D007691 5.0e-117 425.2 371 57.4
BolC9t58538H Brassica oleracea HOM05D006224 ORTHO05D007691 5.0e-117 425.2 370 57.3
Zm00001eb309830 Zea mays HOM05D006224 ORTHO05D007691 5.5e-116 421.8 311 63.7
AL6G30950 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 7.2e-116 421.4 367 56.9
Carub.0006s1780 Capsella rubella HOM05D006224 ORTHO05D007691 7.2e-116 421.4 367 56.9
Potri.006G157700 Populus trichocarpa HOM05D006224 ORTHO05D007691 1.2e-115 420.6 331 62.5
ECA236G3755 Erigeron canadensis HOM05D006224 ORTHO05D007691 5.1e-114 415.2 272 71.7
FAN28G2414 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.9e-113 413.3 328 61.9
SGA_v2.0_scaffold23G10152 Striga asiatica HOM05D006224 ORTHO05D007691 2.5e-113 412.9 366 57.7
HPP92_009101 Vanilla planifolia HOM05D006224 ORTHO05D007691 2.5e-113 412.9 336 58.0
CDE04G0176 Ceratophyllum demersum HOM05D006224 ORTHO05D007691 3.3e-113 412.5 327 59.9
Psat1g037920 Pisum sativum HOM05D006224 ORTHO05D007691 7.7e-110 401.4 332 59.3
AL6G30960 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 1.0e-109 401.0 345 57.7
Sp6g24950 Schrenkiella parvula HOM05D006224 ORTHO05D007691 1.0e-109 401.0 325 59.1
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 8.5e-109 397.9 307 62.2
THA.LOC104799742 Tarenaya hassleriana HOM05D006224 ORTHO05D007691 1.1e-108 397.5 283 64.7
FAN26G3318 Fragaria x ananassa HOM05D006224 ORTHO05D007691 3.2e-108 396.0 348 58.6
Ca_25513_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 5.5e-108 395.2 284 66.2
AT5G19470 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 1.6e-107 393.7 345 57.1
Aqoxy5G03790 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 3.6e-107 392.5 321 58.6
C09p56840 Brassica napus HOM05D006224 ORTHO05D007691 7.4e-105 384.8 326 58.3
Sabra06G0124600 Salix brachista HOM05D006224 ORTHO05D007691 1.4e-103 380.6 321 59.5
Nn8g39262 Nelumbo nucifera HOM05D006224 ORTHO05D007691 2.6e-102 376.3 378 54.0
TPR.G31453 Trifolium pratense HOM05D006224 ORTHO05D007691 5.0e-101 372.1 351 53.8
TPR.G31456 Trifolium pratense HOM05D006224 ORTHO05D007691 7.2e-100 368.2 310 58.1
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 8.2e-96 354.8 281 60.1
Lj7A644T17 Lonicera japonica HOM05D006224 ORTHO05D007691 1.7e-93 347.1 395 48.1
Mapoly0084s0007 Marchantia polymorpha HOM05D006224 ORTHO05D007691 1.2e-91 340.9 341 51.3
Pp3c12_9090 Physcomitrium patens HOM05D006224 ORTHO05D007691 6.1e-91 338.6 315 53.0
HanXRQChr05g0139161 Helianthus annuus HOM05D006224 ORTHO05D007691 1.3e-85 320.9 357 50.1
Potri.006G157800 Populus trichocarpa HOM05D006224 ORTHO05D007691 1.7e-85 320.5 331 52.0
SMO347G0504 Selaginella moellendorffii HOM05D006224 ORTHO05D007691 1.2e-81 307.8 294 51.4
Prupe.7G186600 Prunus persica HOM05D006224 ORTHO05D007691 3.1e-79 299.7 277 55.2
unitig_748.g7154 Utricularia gibba HOM05D006224 ORTHO05D007691 5.2e-74 282.3 256 55.9
AUR62033400 Chenopodium quinoa HOM05D006224 ORTHO05D007691 1.4e-71 274.2 231 57.6
Cre13.g582201 Chlamydomonas reinhardtii HOM05D006224 ORTHO05D007691 2.0e-70 270.4 300 46.3
AagrBONN_evm.TU.Sc2ySwM_228.2202 Anthoceros agrestis HOM05D006224 ORTHO05D007691 2.2e-64 250.4 209 57.9
Pp3c3_27400 Physcomitrium patens HOM05D006224 ORTHO05D007691 9.2e-63 245.0 285 41.1
Pp3c6_16000 Physcomitrium patens HOM05D006224 ORTHO05D007691 1.7e-61 240.7 298 40.9
MCO11G748 Micromonas commoda HOM05D006224 ORTHO05D007691 3.1e-58 229.9 293 43.0
PRCOL_00004258 Prasinoderma coloniale HOM05D006224 ORTHO05D007691 2.5e-52 210.3 227 47.1
CARHR193460 Cardamine hirsuta HOM05D006224 ORTHO05D007691 2.7e-46 190.3 129 69.0
Os09g0322200 Oryza sativa ssp. japonica HOM05D006224 ORTHO05D007691 1.6e-35 154.5 145 47.6
unitig_748.g7155 Utricularia gibba HOM05D006224 ORTHO05D007691 9.9e-33 145.2 86 75.6
Ah.09g227190 Amaranthus hybridus HOM05D006224 ORTHO05D007691 2.7e-30 137.1 89 68.5
Cfa025487 Carpinus fangiana HOM05D006224 ORTHO05D007691 1.8e-26 124.4 199 36.7
SEGI_32758 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 9.3e-23 112.1 69 68.1
MSTRG.26438 Avicennia marina HOM05D006224 ORTHO05D007691 3.4e-17 93.6 82 53.7
SEGI_12041 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 2.0e-09 67.8 78 44.9
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 1.7e-08 64.7 42 64.3
SEGI_03040 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 5.5e-07 59.7 64 39.1


User provided reference genes

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