Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g034890 Solanum pennellii HOM05D006896 ORTHO05D007622 1.4e-89 333.2 206 100.0
Solyc06g083505.1 Solanum lycopersicum HOM05D006896 ORTHO05D007622 1.8e-71 273.1 139 97.8
PGSC0003DMG401020091 Solanum tuberosum HOM05D006896 ORTHO05D007622 1.7e-66 256.5 207 82.1
Nitab4.5_0002546g0010 Nicotiana tabacum HOM05D006896 ORTHO05D007622 4.4e-62 241.9 206 73.3
Nitab4.5_0001057g0240 Nicotiana tabacum HOM05D006896 ORTHO05D007622 2.2e-61 239.6 206 73.3
PGSC0003DMG400024908 Solanum tuberosum HOM05D006896 ORTHO05D007622 4.2e-57 225.3 199 77.4
Peaxi162Scf00152g00734 Petunia axillaris HOM05D006896 ORTHO05D007622 5.5e-57 224.9 206 71.8
CAN.G855.24 Capsicum annuum HOM05D006896 ORTHO05D007622 3.7e-53 212.2 207 72.5
Cc02_g30070 Coffea canephora HOM05D006896 ORTHO05D007622 9.1e-36 154.5 151 50.3
Cc04_g02450 Coffea canephora HOM05D006896 ORTHO05D007622 7.2e-33 144.8 144 50.0
TAR636G1166 Trochodendron aralioides HOM05D006896 ORTHO05D007622 6.6e-26 121.7 210 45.7
DCAR_021683 Daucus carota HOM05D006896 ORTHO05D007622 3.6e-24 115.9 211 38.9
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 2.0e-22 110.2 143 44.8
DCAR_023372 Daucus carota HOM05D001895 ORTHO05D002082 2.6e-22 109.8 155 41.9
GSVIVG01016958001 Vitis vinifera HOM05D006896 ORTHO05D007622 1.7e-21 107.1 205 47.3
Actinidia05615 Actinidia chinensis HOM05D006896 ORTHO05D007622 2.2e-21 106.7 156 42.9
unitig_27.g25077 Utricularia gibba HOM05D006896 ORTHO05D007622 2.2e-21 106.7 143 39.2
Eucgr.F03083 Eucalyptus grandis HOM05D006896 ORTHO05D007622 1.4e-20 104.0 155 41.9
CiPaw.04G076100 Carya illinoinensis HOM05D006896 ORTHO05D007622 3.2e-20 102.8 152 40.1
Manes.04G135200 Manihot esculenta HOM05D006896 ORTHO05D007622 1.7e-18 97.1 133 42.9
Nn1g00183 Nelumbo nucifera HOM05D006896 ORTHO05D007622 3.0e-18 96.3 156 37.8
Migut.I00962 Erythranthe guttata HOM05D006896 ORTHO05D007622 3.9e-18 95.9 158 38.6
Aqoxy3G03866 Aquilegia oxysepala HOM05D006896 ORTHO05D007622 1.5e-17 94.0 148 37.2
Ciclev10026494m.g Citrus clementina HOM05D006896 ORTHO05D007622 1.5e-17 94.0 155 38.7
Cpa.g.sc25.137 Carica papaya HOM05D006896 ORTHO05D007622 3.3e-17 92.8 156 38.5
Ciclev10022257m.g Citrus clementina HOM05D006896 ORTHO05D007622 2.8e-16 89.7 155 36.8
CsaV3_7G035230 Cucumis sativus L. HOM05D006896 ORTHO05D007622 1.1e-15 87.8 152 36.2
CANSAT21G0002 Cannabis sativa HOM05D006896 ORTHO05D007622 1.4e-15 87.4 164 40.2
PGR102G1058 Punica granatum HOM05D006896 ORTHO05D007622 1.8e-15 87.0 154 36.4
BcaB05g23986 Brassica carinata HOM05D006896 ORTHO05D007622 3.1e-15 86.3 157 37.6
Haze_24358 Corylus avellana HOM05D006896 ORTHO05D007622 6.8e-15 85.1 158 35.4
MELO3C024432.2 Cucumis melo HOM05D006896 ORTHO05D007622 6.8e-15 85.1 153 34.6
SalBow1G2551 Salvia bowleyana HOM05D006896 ORTHO05D007622 8.9e-15 84.7 123 39.8
RhsimUnG0044500 Rhododendron simsii HOM05D006896 ORTHO05D007622 1.2e-14 84.3 129 38.8
HanXRQChr04g0122251 Helianthus annuus HOM05D006896 ORTHO05D007622 1.5e-14 84.0 154 37.7
Sc15g0001740 Simmondsia chinensis HOM05D006896 ORTHO05D007622 2.6e-14 83.2 154 34.4
Gohir.A09G147400 Gossypium hirsutum HOM05D006896 ORTHO05D007622 3.4e-14 82.8 162 35.2
PSO210G5688 Papaver somniferum HOM05D006896 ORTHO05D007622 4.4e-14 82.4 169 37.9
Gohir.D09G143000 Gossypium hirsutum HOM05D006896 ORTHO05D007622 7.5e-14 81.6 162 35.2
Lsat_1_v5_gn_7_60640 Lactuca sativa HOM05D006896 ORTHO05D007622 7.5e-14 81.6 155 36.8
Hund07447 Selenicereus undatus HOM05D006896 ORTHO05D007622 9.8e-14 81.3 156 36.5
Phvul.006G182200 Phaseolus vulgaris HOM05D006896 ORTHO05D007622 2.2e-13 80.1 160 36.9
Gorai.006G164500 Gossypium raimondii HOM05D006896 ORTHO05D007622 3.7e-13 79.3 162 34.6
ECA240G1433 Erigeron canadensis HOM05D006896 ORTHO05D007622 4.9e-13 79.0 154 37.0
THA.LOC104825918 Tarenaya hassleriana HOM05D006896 ORTHO05D007622 6.4e-13 78.6 150 36.7
Thhalv10023695m.g Eutrema salsugineum HOM05D006896 ORTHO05D007622 1.4e-12 77.4 157 36.3
MD08G1165000 Malus domestica HOM05D006896 ORTHO05D007622 1.4e-12 77.4 164 36.0
A07p06970 Brassica napus HOM05D006896 ORTHO05D007622 1.9e-12 77.0 154 37.0
MD15G1357300 Malus domestica HOM05D006896 ORTHO05D007622 1.9e-12 77.0 164 35.4
Aa31LG5G1310 Aethionema arabicum HOM05D006896 ORTHO05D007622 3.2e-12 76.3 137 35.8
EL10Ac4g10131 Beta vulgaris HOM05D006896 ORTHO05D007622 3.2e-12 76.3 140 36.4
EL10Ac4g10129 Beta vulgaris HOM05D006896 ORTHO05D007622 5.4e-12 75.5 140 35.7
Zm00001eb122950 Zea mays HOM05D006896 ORTHO05D007622 7.0e-12 75.1 130 33.8
ECA233G6105 Erigeron canadensis HOM05D006896 ORTHO05D007622 9.2e-12 74.7 142 34.5
TWI75G0052 Tripterygium wilfordii HOM05D006896 ORTHO05D007622 9.2e-12 74.7 152 35.5
Thecc.01G002700 Theobroma cacao HOM05D006896 ORTHO05D007622 1.2e-11 74.3 158 32.3
VMungo0540G0426 Vigna mungo HOM05D006896 ORTHO05D007622 1.2e-11 74.3 154 35.7
QL06p022383 Quercus lobata HOM05D006896 ORTHO05D007622 2.7e-11 73.2 173 32.9
Thhalv10028974m.g Eutrema salsugineum HOM05D006896 ORTHO05D007622 3.5e-11 72.8 152 36.2
Cfa015335 Carpinus fangiana HOM05D006896 ORTHO05D007622 6.0e-11 72.0 162 34.6
AL6G51750 Arabidopsis lyrata HOM05D006896 ORTHO05D007622 1.5e-09 67.4 151 31.8
TAR636G1722 Trochodendron aralioides HOM05D006896 ORTHO05D007622 2.5e-09 66.6 99 40.4
Carub.0006s3560 Capsella rubella HOM05D006896 ORTHO05D007622 5.6e-09 65.5 152 33.6
Os07g0611600 Oryza sativa ssp. japonica HOM05D006896 ORTHO05D007622 9.5e-09 64.7 143 28.7
AT4G01590 Arabidopsis thaliana HOM05D006896 ORTHO05D007622 2.1e-08 63.5 139 30.2
SalBow2G3180 Salvia bowleyana HOM05D006896 ORTHO05D007622 2.1e-08 63.5 80 45.0
COL.COLO4_30531 Corchorus olitorius HOM05D006896 ORTHO05D007622 4.7e-08 62.4 157 32.5
BraA07t28487Z Brassica rapa HOM05D006896 ORTHO05D007622 6.2e-08 62.0 154 33.1
Psat6g044520 Pisum sativum HOM05D006896 ORTHO05D007622 8.1e-08 61.6 158 33.5
AagrBONN_evm.TU.Sc2ySwM_344.5457 Anthoceros agrestis HOM05D015888 ORTHO05D007622 2.3e-07 60.1 181 30.4
C07p10600 Brassica napus HOM05D006896 ORTHO05D007622 5.2e-07 58.9 157 31.2
BolC7t41525H Brassica oleracea HOM05D006896 ORTHO05D007622 6.8e-07 58.5 157 31.2
ClCG09G000270 Citrullus lanatus HOM05D006896 ORTHO05D007622 1.5e-06 57.4 114 34.2
AT4G35685 Arabidopsis thaliana HOM05D006896 ORTHO05D007622 2.6e-06 56.6 153 29.4
Carub.0003s1963 Capsella rubella HOM05D006896 ORTHO05D007622 4.4e-06 55.8 145 29.7


User provided reference genes

Program Settings