Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 2.5e-182 642.1 360 100.0
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 2.5e-166 589.0 376 90.4
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 1.6e-144 516.5 362 79.0
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 1.8e-143 513.1 361 79.8
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 1.0e-138 497.3 354 80.2
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 1.9e-113 413.3 368 68.2
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 4.0e-87 325.9 355 55.8
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 2.7e-83 313.2 380 56.6
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 3.6e-80 302.8 295 60.7
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 1.5e-78 297.4 286 59.4
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 8.4e-77 291.6 370 51.9
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 7.1e-76 288.5 359 49.9
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 9.3e-76 288.1 285 60.0
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 2.1e-75 287.0 362 55.2
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 1.7e-74 283.9 293 58.4
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 2.3e-74 283.5 288 55.6
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 3.9e-74 282.7 365 54.5
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 5.1e-74 282.3 360 53.9
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 6.6e-74 282.0 296 57.8
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.5e-73 280.8 277 60.3
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 1.9e-73 280.4 296 57.4
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 3.3e-73 279.6 306 53.6
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 4.3e-73 279.3 289 57.1
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 1.6e-72 277.3 285 56.5
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 3.4e-70 269.6 360 51.7
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 5.8e-70 268.9 277 58.1
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 9.9e-70 268.1 248 59.7
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 1.3e-69 267.7 283 57.2
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 1.7e-69 267.3 369 49.6
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 2.2e-69 266.9 303 55.4
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 2.2e-69 266.9 373 49.3
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 3.8e-69 266.2 298 58.1
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 8.4e-69 265.0 274 59.5
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 8.4e-69 265.0 294 55.8
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 8.4e-69 265.0 291 55.3
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 1.9e-68 263.8 221 68.8
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 2.4e-68 263.5 297 58.6
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 4.2e-68 262.7 275 57.5
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 1.2e-67 261.2 294 55.8
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 2.7e-67 260.0 293 55.6
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 3.5e-67 259.6 368 50.0
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 4.6e-67 259.2 289 53.6
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 1.5e-65 254.2 288 55.2
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 1.5e-65 254.2 291 55.0
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 3.3e-65 253.1 373 48.8
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 4.3e-65 252.7 302 53.0
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 9.6e-65 251.5 278 56.8
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 9.6e-65 251.5 275 55.3
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 1.6e-64 250.8 286 55.9
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 2.1e-64 250.4 283 57.2
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 3.6e-64 249.6 278 56.5
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 6.2e-64 248.8 360 47.5
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 6.2e-64 248.8 296 53.0
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 8.1e-64 248.4 332 48.5
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 1.4e-63 247.7 289 52.2
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 1.8e-63 247.3 368 49.5
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 1.8e-63 247.3 270 53.3
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 2.4e-63 246.9 280 53.2
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 3.1e-63 246.5 298 54.0
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 3.1e-63 246.5 275 53.5
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 3.1e-63 246.5 271 53.9
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 2.0e-62 243.8 297 50.5
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 3.4e-62 243.0 274 56.9
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 3.4e-62 243.0 261 55.9
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 5.8e-62 242.3 290 52.1
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 7.6e-62 241.9 368 47.6
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 9.9e-62 241.5 295 52.9
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 1.3e-61 241.1 352 49.4
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 1.7e-61 240.7 292 51.4
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 2.9e-61 240.0 276 53.3
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 3.8e-61 239.6 298 52.3
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 1.1e-60 238.0 282 52.5
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.9e-60 237.3 311 51.1
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 1.9e-60 237.3 270 56.7
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 2.4e-60 236.9 291 50.2
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 3.2e-60 236.5 282 53.2
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 4.2e-60 236.1 270 56.7
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 9.3e-60 235.0 293 50.9
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 6.0e-59 232.3 288 50.0
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 1.8e-58 230.7 288 52.1
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 1.8e-58 230.7 293 49.1
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 3.0e-58 229.9 307 50.2
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 5.1e-58 229.2 296 49.7
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 5.1e-58 229.2 277 51.3
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 1.1e-57 228.0 501 36.9
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 1.9e-57 227.3 288 52.1
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 1.3e-56 224.6 279 49.8
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 2.4e-55 220.3 280 49.3
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 1.2e-54 218.0 273 51.3
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 1.0e-53 214.9 297 48.8
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 2.2e-53 213.8 267 49.8
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 3.8e-53 213.0 177 66.7
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 9.3e-52 208.4 281 50.9
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 3.5e-51 206.5 205 59.5
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 3.3e-49 199.9 293 49.1
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 9.6e-49 198.4 299 45.8
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 9.6e-49 198.4 303 45.5
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 1.2e-46 191.4 227 51.5
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 5.9e-46 189.1 346 40.5
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 6.5e-45 185.7 238 49.2
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 7.2e-44 182.2 353 38.2
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 1.2e-43 181.4 304 42.4
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 1.3e-42 177.9 288 42.0
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 1.3e-42 177.9 307 41.4
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 1.3e-42 177.9 351 39.9
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 3.3e-41 173.3 161 59.0
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 7.4e-41 172.2 267 44.6
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 1.8e-34 151.0 270 41.5
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 3.9e-34 149.8 284 43.0
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 1.2e-30 138.3 247 39.3
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 3.4e-30 136.7 255 37.6
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 9.7e-25 118.6 301 34.2
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 8.2e-24 115.5 246 37.0
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 2.9e-21 107.1 163 43.6
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 1.1e-20 105.1 281 33.5
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 9.4e-20 102.1 91 64.8
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 3.7e-16 90.1 126 46.8
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 8.2e-16 89.0 285 29.8
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 1.0e-10 72.0 107 45.8
PSO017G3993 Papaver somniferum HOM05D006271 ORTHO05D008237 4.5e-06 56.6 218 28.4
PSO170G2099 Papaver somniferum HOM05D006271 ORTHO05D008237 4.5e-06 56.6 230 28.3


User provided reference genes

Program Settings