Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g016500 Solanum pennellii HOM05D002744 ORTHO05D006546 3.5e-32 141.0 68 100.0
Solyc02g068420.4 Solanum lycopersicum HOM05D002744 ORTHO05D006546 9.1e-09 63.2 66 60.6
Sopen02g017560 Solanum pennellii HOM05D002744 ORTHO05D006546 1.2e-08 62.8 46 76.1
PGSC0003DMG400009431 Solanum tuberosum HOM05D002744 ORTHO05D006546 1.2e-08 62.8 46 76.1
Nitab4.5_0000263g0070 Nicotiana tabacum HOM05D002744 ORTHO05D006546 4.5e-08 60.8 46 73.9
Nitab4.5_0000928g0070 Nicotiana tabacum HOM05D002744 ORTHO05D006546 4.5e-08 60.8 46 73.9
Peaxi162Scf00284g00133 Petunia axillaris HOM05D002744 ORTHO05D006546 4.5e-08 60.8 45 75.6
PGSC0003DMG400024457 Solanum tuberosum HOM05D002744 ORTHO05D006546 5.9e-08 60.5 46 73.9
CAN.G39.17 Capsicum annuum HOM05D002744 ORTHO05D006546 1.1e-06 56.2 45 71.1
Cc02_g05710 Coffea canephora HOM05D002744 ORTHO05D006546 1.5e-06 55.8 46 67.4
MSTRG.5049 Avicennia marina HOM05D002744 ORTHO05D006546 1.9e-06 55.5 63 55.6
Oeu026182.1 Olea europaea HOM05D002744 ORTHO05D006546 3.3e-06 54.7 46 65.2
CDE04G1223 Ceratophyllum demersum HOM05D002744 ORTHO05D006546 5.5e-06 53.9 46 65.2
Atru.chr12.137 Acer truncatum HOM05D002744 ORTHO05D006546 7.2e-06 53.5 46 63.0
Lsat_1_v5_gn_2_125961 Lactuca sativa HOM05D002744 ORTHO05D006546 7.2e-06 53.5 46 63.0
vmacro09982 Vaccinium macrocarpon HOM05D002744 ORTHO05D006546 7.2e-06 53.5 47 59.6
Actinidia00987 Actinidia chinensis HOM05D002744 ORTHO05D006546 9.5e-06 53.1 50 60.0
HanXRQChr07g0186551 Helianthus annuus HOM05D002744 ORTHO05D006546 9.5e-06 53.1 46 60.9
HanXRQChr10g0309081 Helianthus annuus HOM05D002744 ORTHO05D006546 9.5e-06 53.1 46 60.9
SalBow1G3835 Salvia bowleyana HOM05D002744 ORTHO05D006546 9.5e-06 53.1 46 65.2
SalBow8G2269 Salvia bowleyana HOM05D002744 ORTHO05D006546 9.5e-06 53.1 46 65.2
SalBow8G4474 Salvia bowleyana HOM05D002744 ORTHO05D006546 9.5e-06 53.1 46 65.2


User provided reference genes

Program Settings