Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g012740 Solanum pennellii HOM05D005234 ORTHO05D006583 6.4e-91 337.4 173 100.0
Solyc06g036670.2 Solanum lycopersicum HOM05D005234 ORTHO05D006583 6.7e-64 247.7 137 93.4
Nitab4.5_0000271g0220 Nicotiana tabacum HOM05D005234 ORTHO05D006583 3.0e-56 222.2 154 77.9
Peaxi162Scf00629g00122 Petunia axillaris HOM05D005234 ORTHO05D006583 1.8e-53 213.0 156 76.9
GSVIVG01032632001 Vitis vinifera HOM05D005234 ORTHO05D006583 4.2e-50 201.8 172 62.2
Lj8A92T86 Lonicera japonica HOM05D005234 ORTHO05D006583 1.6e-49 199.9 167 62.9
Actinidia38226 Actinidia chinensis HOM05D005234 ORTHO05D006583 3.5e-49 198.7 171 61.4
CSS0021401 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 6.1e-49 198.0 173 59.5
CSS0032920 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 1.3e-48 196.8 173 59.5
COL.COLO4_05802 Corchorus olitorius HOM05D005234 ORTHO05D006583 6.7e-48 194.5 173 57.8
CiPaw.01G279400 Carya illinoinensis HOM05D005234 ORTHO05D006583 2.5e-47 192.6 173 57.8
Manes.07G106500 Manihot esculenta HOM05D005234 ORTHO05D006583 5.7e-47 191.4 173 54.3
Cpa.g.sc1.299 Carica papaya HOM05D005234 ORTHO05D006583 1.3e-46 190.3 171 56.1
Cc02_g08680 Coffea canephora HOM05D005234 ORTHO05D006583 4.8e-46 188.3 173 60.7
MD01G1116500 Malus domestica HOM05D005234 ORTHO05D006583 4.8e-46 188.3 172 58.1
Duzib114G0593 Durio zibethinus HOM05D005234 ORTHO05D006583 6.3e-46 188.0 173 56.6
QL08p057492 Quercus lobata HOM05D005234 ORTHO05D006583 8.2e-46 187.6 175 54.9
Sabra08G0033600 Salix brachista HOM05D005234 ORTHO05D006583 1.1e-45 187.2 172 55.8
SGA_v2.0_scaffold193G40685 Striga asiatica HOM05D005234 ORTHO05D006583 3.1e-45 185.7 169 53.8
Gorai.012G067000 Gossypium raimondii HOM05D005234 ORTHO05D006583 1.2e-44 183.7 170 54.1
Gohir.D04G060251 Gossypium hirsutum HOM05D005234 ORTHO05D006583 2.6e-44 182.6 170 53.5
Ciclev10032643m.g Citrus clementina HOM05D005234 ORTHO05D006583 4.5e-44 181.8 174 54.0
Cfa001561 Carpinus fangiana HOM05D005234 ORTHO05D006583 1.3e-43 180.3 173 53.8
Haze_16968 Corylus avellana HOM05D005234 ORTHO05D006583 1.3e-43 180.3 173 53.2
Dinv31388 Davidia involucrata HOM05D005234 ORTHO05D006583 1.3e-43 180.3 155 62.6
Gohir.A05G352700 Gossypium hirsutum HOM05D005234 ORTHO05D006583 6.5e-43 177.9 170 52.4
RcHm_v2.0_Chr1g0364981 Rosa chinensis HOM05D005234 ORTHO05D006583 6.5e-43 177.9 173 52.0
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 1.4e-42 176.8 171 51.5
Aqoxy4G03097 Aquilegia oxysepala HOM05D005234 ORTHO05D006583 1.9e-42 176.4 171 52.0
AL5G36200 Arabidopsis lyrata HOM05D005234 ORTHO05D006583 3.2e-42 175.6 173 52.0
CANSAT56G3438 Cannabis sativa HOM05D005234 ORTHO05D006583 4.2e-42 175.3 173 50.3
Aa31LG10G10060 Aethionema arabicum HOM05D005234 ORTHO05D006583 5.5e-42 174.9 171 50.3
Carub.0005s2171 Capsella rubella HOM05D005234 ORTHO05D006583 1.2e-41 173.7 172 53.5
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 1.2e-41 173.7 172 51.7
BcaB01g00128 Brassica carinata HOM05D005234 ORTHO05D006583 1.6e-41 173.3 170 51.8
Nn2g10556 Nelumbo nucifera HOM05D005234 ORTHO05D006583 1.6e-41 173.3 172 53.5
SalBow4G2780 Salvia bowleyana HOM05D005234 ORTHO05D006583 1.6e-41 173.3 172 53.5
HanXRQChr14g0460751 Helianthus annuus HOM05D005234 ORTHO05D006583 7.9e-41 171.0 171 52.6
TPR.G10401 Trifolium pratense HOM05D005234 ORTHO05D006583 1.0e-40 170.6 171 52.6
CARHR165100 Cardamine hirsuta HOM05D005234 ORTHO05D006583 3.0e-40 169.1 173 49.7
EL10Ac2g03507 Beta vulgaris HOM05D005234 ORTHO05D006583 5.1e-40 168.3 172 53.5
AUR62025541 Chenopodium quinoa HOM05D005234 ORTHO05D006583 6.7e-40 167.9 172 50.0
TWI63G0851 Tripterygium wilfordii HOM05D005234 ORTHO05D006583 6.7e-40 167.9 170 52.4
AT3G55080 Arabidopsis thaliana HOM05D005234 ORTHO05D006583 8.8e-40 167.5 172 50.0
Glyma.10G292500 Glycine max HOM05D005234 ORTHO05D006583 4.3e-39 165.2 170 51.2
ClCG09G020200 Citrullus lanatus HOM05D005234 ORTHO05D006583 1.3e-38 163.7 171 49.7
Medtr1g115980 Medicago truncatula HOM05D005234 ORTHO05D006583 1.3e-38 163.7 171 50.9
THA.LOC104809996 Tarenaya hassleriana HOM05D005234 ORTHO05D006583 1.7e-38 163.3 173 49.1
Sp5g07340 Schrenkiella parvula HOM05D005234 ORTHO05D006583 2.8e-38 162.5 171 49.1
Thhalv10010346m.g Eutrema salsugineum HOM05D005234 ORTHO05D006583 4.8e-38 161.8 173 48.0
MELO3C025470.2 Cucumis melo HOM05D005234 ORTHO05D006583 6.3e-38 161.4 171 49.1
PSO063G5764 Papaver somniferum HOM05D005234 ORTHO05D006583 1.1e-37 160.6 172 50.6
AUR62042662 Chenopodium quinoa HOM05D005234 ORTHO05D006583 1.4e-37 160.2 167 50.9
Ca_11325_v3 Cicer arietinum L. HOM05D005234 ORTHO05D006583 1.4e-37 160.2 171 50.3
PGR044G0090 Punica granatum HOM05D005234 ORTHO05D006583 1.8e-37 159.8 172 51.2
Nitab4.5_0006265g0070 Nicotiana tabacum HOM05D005234 ORTHO05D006583 2.4e-37 159.5 151 62.3
Sed0019162 Sechium edule HOM05D005234 ORTHO05D006583 4.1e-37 158.7 173 48.6
SEGI_06338 Sequoiadendron giganteum HOM05D005234 ORTHO05D006583 5.3e-37 158.3 173 49.1
Potri.008G047400 Populus trichocarpa HOM05D005234 ORTHO05D006583 6.9e-37 157.9 153 52.9
BcaC07g39833 Brassica carinata HOM05D005234 ORTHO05D006583 1.5e-36 156.8 170 48.8
C08p30350 Brassica napus HOM05D005234 ORTHO05D006583 1.5e-36 156.8 170 48.8
CsaV3_5G026250 Cucumis sativus L. HOM05D005234 ORTHO05D006583 2.0e-36 156.4 172 48.3
Migut.A00396 Erythranthe guttata HOM05D005234 ORTHO05D006583 2.6e-36 156.0 172 50.0
VMungo0720G1519 Vigna mungo HOM05D005234 ORTHO05D006583 3.4e-36 155.6 173 49.7
BolC8t50657H Brassica oleracea HOM05D005234 ORTHO05D006583 4.5e-36 155.2 170 48.8
Lalb_Chr06g0164091 Lupinus albus HOM05D005234 ORTHO05D006583 4.5e-36 155.2 171 50.3
A09p48110 Brassica napus HOM05D005234 ORTHO05D006583 1.3e-35 153.7 170 48.8
Eucgr.J01148 Eucalyptus grandis HOM05D005234 ORTHO05D006583 1.3e-35 153.7 170 51.8
Phvul.007G007800 Phaseolus vulgaris HOM05D005234 ORTHO05D006583 2.2e-35 152.9 173 48.6
CDE04G1829 Ceratophyllum demersum HOM05D005234 ORTHO05D006583 1.1e-34 150.6 172 48.3
arahy.Tifrunner.gnm1.ann1.E1ZVHS Arachis hypogaea HOM05D005234 ORTHO05D006583 1.4e-34 150.2 172 46.5
ATR0827G035 Amborella trichopoda HOM05D005234 ORTHO05D006583 3.2e-34 149.1 152 51.3
arahy.Tifrunner.gnm1.ann1.IBY72V Arachis hypogaea HOM05D005234 ORTHO05D006583 9.4e-34 147.5 174 46.0
BraA09t40265Z Brassica rapa HOM05D005234 ORTHO05D006583 3.9e-32 142.1 185 44.3
FAN01G2148 Fragaria x ananassa HOM05D005234 ORTHO05D006583 3.9e-32 142.1 155 51.0
FAN01G2697 Fragaria x ananassa HOM05D005234 ORTHO05D006583 3.9e-32 142.1 155 51.0
Hma1.2p1_0348F.1_g131710 Hydrangea macrophylla HOM05D005234 ORTHO05D006583 3.3e-31 139.0 109 62.4
FAN06G4140 Fragaria x ananassa HOM05D005234 ORTHO05D006583 2.8e-30 136.0 129 51.9
FAN06G4823 Fragaria x ananassa HOM05D005234 ORTHO05D006583 8.2e-30 134.4 129 51.2
HPP92_021203 Vanilla planifolia HOM05D005234 ORTHO05D006583 1.1e-29 134.0 173 42.2
Mapoly0068s0008 Marchantia polymorpha HOM05D005234 ORTHO05D006583 2.4e-29 132.9 175 40.0
Hund06032 Selenicereus undatus HOM05D005234 ORTHO05D006583 2.6e-28 129.4 156 46.8
unitig_26.g8857 Utricularia gibba HOM05D005234 ORTHO05D006583 2.6e-28 129.4 169 42.6
Pp3c3_27330 Physcomitrium patens HOM05D005234 ORTHO05D006583 1.1e-26 124.0 170 40.0
BolC8t50642H Brassica oleracea HOM05D005234 ORTHO05D006583 6.3e-22 108.2 143 42.0
BolC8t50645H Brassica oleracea HOM05D005234 ORTHO05D006583 6.3e-22 108.2 143 42.0
BolC8t50648H Brassica oleracea HOM05D005234 ORTHO05D006583 6.3e-22 108.2 143 42.0
BcaC07g39828 Brassica carinata HOM05D005234 ORTHO05D006583 4.1e-21 105.5 143 41.3
Atru.chr12.596 Acer truncatum HOM05D005234 ORTHO05D006583 5.3e-21 105.1 89 55.1
SMO141G0013 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 9.1e-21 104.4 169 35.5
A09p32550 Brassica napus HOM05D005234 ORTHO05D006583 1.3e-19 100.5 170 38.2
FAN03G0311 Fragaria x ananassa HOM05D002912 ORTHO05D003191 6.5e-19 98.2 123 48.0
Sc09g0006880 Simmondsia chinensis HOM05D005234 ORTHO05D006583 8.5e-19 97.8 106 47.2
Pp3c19_10210 Physcomitrium patens HOM05D005234 ORTHO05D006583 1.2e-17 94.0 165 35.2
Os01g0976450 Oryza sativa ssp. japonica HOM05D005234 ORTHO05D006583 3.7e-14 82.4 95 47.4
SMO348G0083 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 6.3e-14 81.6 171 34.5
Mapoly0004s0119 Marchantia polymorpha HOM05D034728 ORTHO05D006583 1.3e-11 73.9 119 37.0
SMO367G0191 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 1.7e-11 73.6 164 29.3
MD01G1117100 Malus domestica HOM05D005234 ORTHO05D006583 6.5e-11 71.6 154 35.1
Mapoly0004s0106 Marchantia polymorpha HOM05D034728 ORTHO05D006583 2.5e-10 69.7 119 35.3
FAN10G0581 Fragaria x ananassa HOM05D005234 ORTHO05D006583 7.2e-10 68.2 74 47.3
SMO340G0223 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 1.4e-08 63.9 178 28.1
vmacro07107 Vaccinium macrocarpon HOM05D005234 ORTHO05D006583 2.3e-08 63.2 47 66.0
SMO180G0001 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 3.0e-08 62.8 178 28.1
BraA09t38797Z Brassica rapa HOM05D005234 ORTHO05D006583 6.3e-06 55.1 64 45.3


User provided reference genes

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