Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g008630 Solanum pennellii HOM05D001818 ORTHO05D037626 5.8e-39 163.7 80 100.0
PGSC0003DMG400039004 Solanum tuberosum HOM05D001818 ORTHO05D001780 2.2e-17 92.0 67 70.1
PGSC0003DMG400016653 Solanum tuberosum HOM05D001818 ORTHO05D001780 1.0e-14 83.2 65 64.6
Solyc06g030610.1 Solanum lycopersicum HOM05D001818 ORTHO05D037626 9.4e-13 76.6 68 57.4
Solyc06g030620.3 Solanum lycopersicum HOM05D001818 ORTHO05D037626 3.6e-12 74.7 70 57.1
PGSC0003DMG400044406 Solanum tuberosum HOM05D001818 ORTHO05D001780 1.4e-11 72.8 67 58.2
PGSC0003DMG400040644 Solanum tuberosum HOM05D001818 ORTHO05D001780 1.8e-11 72.4 67 53.7
Sopen06g015370 Solanum pennellii HOM05D001818 ORTHO05D001780 2.6e-10 68.6 65 53.8
PGSC0003DMG400015853 Solanum tuberosum HOM05D001818 ORTHO05D001780 4.4e-10 67.8 64 53.1
Sopen08g015960 Solanum pennellii HOM05D001818 ORTHO05D001780 5.7e-10 67.4 64 53.1
Solyc08g060810.3 Solanum lycopersicum HOM05D001818 ORTHO05D001780 7.5e-10 67.0 64 53.1
CAN.G1230.8 Capsicum annuum HOM05D001818 ORTHO05D001780 3.7e-09 64.7 64 54.7
Peaxi162Scf00785g00036 Petunia axillaris HOM05D001818 ORTHO05D001780 3.7e-09 64.7 64 51.6
Solyc06g049010.2 Solanum lycopersicum HOM05D001818 ORTHO05D001780 3.7e-09 64.7 65 50.8
Nitab4.5_0000209g0110 Nicotiana tabacum HOM05D001818 ORTHO05D001780 1.1e-08 63.2 58 53.4
Nitab4.5_0007912g0010 Nicotiana tabacum HOM05D001818 ORTHO05D001780 1.1e-08 63.2 58 53.4
PGSC0003DMG400023177 Solanum tuberosum HOM05D008195 ORTHO05D010950 7.0e-08 60.5 73 47.9
CAN.G836.4 Capsicum annuum HOM05D001818 ORTHO05D001780 9.1e-08 60.1 64 48.4
Glyma.04G147000 Glycine max HOM05D001818 ORTHO05D001780 5.9e-07 57.4 79 39.2
unitig_899.g15441 Utricularia gibba HOM05D001818 ORTHO05D001780 5.9e-07 57.4 79 48.1
Phvul.001G051300 Phaseolus vulgaris HOM05D001818 ORTHO05D001780 7.7e-07 57.0 57 49.1
MELO3C004498.2 Cucumis melo HOM05D001818 ORTHO05D001780 1.0e-06 56.6 73 43.8
CsaV3_2G002930 Cucumis sativus L. HOM05D001818 ORTHO05D001780 1.0e-06 56.6 72 44.4
PGSC0003DMG401020463 Solanum tuberosum HOM05D008195 ORTHO05D010950 1.0e-06 56.6 58 50.0
ATR1120G141 Amborella trichopoda HOM05D001818 ORTHO05D001780 1.3e-06 56.2 79 43.0
COL.COLO4_35110 Corchorus olitorius HOM05D001818 ORTHO05D001780 1.3e-06 56.2 67 40.3
Haze_21523 Corylus avellana HOM05D001818 ORTHO05D001780 1.3e-06 56.2 64 48.4
Duzib150G1552 Durio zibethinus HOM05D001818 ORTHO05D001780 1.3e-06 56.2 67 40.3
TWI63G0282 Tripterygium wilfordii HOM05D001818 ORTHO05D001780 1.3e-06 56.2 75 42.7
Eucgr.C01334 Eucalyptus grandis HOM05D001818 ORTHO05D001780 1.7e-06 55.8 77 40.3
Medtr3g107280 Medicago truncatula HOM05D001818 ORTHO05D001780 1.7e-06 55.8 62 46.8
Sp2g22190 Schrenkiella parvula HOM05D001818 ORTHO05D001780 1.7e-06 55.8 58 51.7
TWI34G0540 Tripterygium wilfordii HOM05D001818 ORTHO05D001780 1.7e-06 55.8 63 44.4
Carub.0006s2317 Capsella rubella HOM05D001818 ORTHO05D001780 2.9e-06 55.1 58 53.4
Nn8g39470 Nelumbo nucifera HOM05D001818 ORTHO05D001780 2.9e-06 55.1 87 39.1
Sc08g0006530 Simmondsia chinensis HOM05D001818 ORTHO05D001780 2.9e-06 55.1 58 48.3
TWI32G0358 Tripterygium wilfordii HOM05D001818 ORTHO05D001780 2.9e-06 55.1 58 48.3
VMungo0647G1900 Vigna mungo HOM05D001818 ORTHO05D001780 3.8e-06 54.7 57 47.4
Aa31LG11G4530 Aethionema arabicum HOM05D001818 ORTHO05D001780 5.0e-06 54.3 58 50.0
Cfa013149 Carpinus fangiana HOM05D001818 ORTHO05D001780 5.0e-06 54.3 58 48.3
THA.LOC104824612 Tarenaya hassleriana HOM05D001818 ORTHO05D001780 5.0e-06 54.3 58 46.6
TPR.G15644 Trifolium pratense HOM05D001818 ORTHO05D001780 5.0e-06 54.3 57 49.1
arahy.Tifrunner.gnm1.ann1.45B7J4 Arachis hypogaea HOM05D001818 ORTHO05D001780 6.5e-06 53.9 57 47.4
Duzib168G0984 Durio zibethinus HOM05D001818 ORTHO05D001780 6.5e-06 53.9 67 37.3
Lj4g0020127 Lotus japonicus HOM05D001818 ORTHO05D001780 6.5e-06 53.9 58 46.6
Nn2g12049 Nelumbo nucifera HOM05D001818 ORTHO05D001780 6.5e-06 53.9 58 48.3
Sabra06G0198500 Salix brachista HOM05D001818 ORTHO05D001780 6.5e-06 53.9 63 46.0
Atru.chr7.1138 Acer truncatum HOM05D001818 ORTHO05D001780 8.5e-06 53.5 59 45.8
AT5G25350 Arabidopsis thaliana HOM05D001818 ORTHO05D001780 8.5e-06 53.5 59 49.2
CARHR188070 Cardamine hirsuta HOM05D001818 ORTHO05D001780 8.5e-06 53.5 58 51.7
ClCG11G003110 Citrullus lanatus HOM05D001818 ORTHO05D001780 8.5e-06 53.5 72 41.7
Eucgr.C02778 Eucalyptus grandis HOM05D001818 ORTHO05D001780 8.5e-06 53.5 46 54.3
Lalb_Chr13g0301801 Lupinus albus HOM05D001818 ORTHO05D001780 8.5e-06 53.5 58 46.6
Potri.006G068500 Populus trichocarpa HOM05D001818 ORTHO05D001780 8.5e-06 53.5 64 46.9


User provided reference genes

Program Settings