Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g005870 Solanum pennellii HOM05D006465 ORTHO05D008207 1.4e-80 302.8 142 100.0
PGSC0003DMG400030138 Solanum tuberosum HOM05D006465 ORTHO05D008207 1.3e-76 289.7 149 92.6
Nitab4.5_0000181g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 1.9e-69 265.8 149 83.2
CAN.G934.1 Capsicum annuum HOM05D006465 ORTHO05D008207 1.7e-65 252.7 142 83.8
Peaxi162Scf00270g01115 Petunia axillaris HOM05D006465 ORTHO05D008207 9.7e-61 236.9 152 73.7
Cc07_g18520 Coffea canephora HOM05D006465 ORTHO05D008207 6.3e-52 207.6 158 61.4
Hund23271 Selenicereus undatus HOM05D006465 ORTHO05D008207 4.2e-48 194.9 135 68.1
Solyc06g016760.3 Solanum lycopersicum HOM05D006465 ORTHO05D008207 2.7e-47 192.2 88 98.9
MSTRG.3605 Avicennia marina HOM05D006465 ORTHO05D008207 6.1e-47 191.0 129 66.7
Lj4A839G53 Lonicera japonica HOM05D006465 ORTHO05D008207 1.0e-46 190.3 147 63.3
Ah.02g121490 Amaranthus hybridus HOM05D006465 ORTHO05D008207 1.4e-46 189.9 115 72.2
MD07G1057500 Malus domestica HOM05D006465 ORTHO05D008207 1.4e-46 189.9 145 61.4
Migut.L00965 Erythranthe guttata HOM05D006465 ORTHO05D008207 2.3e-46 189.1 116 72.4
TAR381G0246 Trochodendron aralioides HOM05D006465 ORTHO05D008207 2.3e-46 189.1 117 73.5
Dinv07122 Davidia involucrata HOM05D006465 ORTHO05D008207 3.9e-46 188.3 112 71.4
Sc07g0001830 Simmondsia chinensis HOM05D006465 ORTHO05D008207 3.9e-46 188.3 129 68.2
Migut.L00880 Erythranthe guttata HOM05D006465 ORTHO05D008207 5.1e-46 188.0 116 70.7
GSVIVG01026483001 Vitis vinifera HOM05D006465 ORTHO05D008207 8.8e-46 187.2 110 75.5
Actinidia06618 Actinidia chinensis HOM05D006465 ORTHO05D008207 1.5e-45 186.4 115 71.3
vmacro12798 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 1.5e-45 186.4 112 76.8
Lsat_1_v5_gn_9_25981 Lactuca sativa HOM05D006465 ORTHO05D008207 2.6e-45 185.7 136 65.4
Oeu004242.1 Olea europaea HOM05D006465 ORTHO05D008207 2.6e-45 185.7 112 74.1
Hma1.2p1_0476F.1_g160840 Hydrangea macrophylla HOM05D006465 ORTHO05D008207 3.3e-45 185.3 129 67.4
Manes.03G123050 Manihot esculenta HOM05D006465 ORTHO05D008207 3.3e-45 185.3 138 62.3
AUR62017880 Chenopodium quinoa HOM05D006465 ORTHO05D008207 4.4e-45 184.9 115 71.3
Duzib187G1992 Durio zibethinus HOM05D006465 ORTHO05D008207 4.4e-45 184.9 110 72.7
Dinv24364 Davidia involucrata HOM05D006465 ORTHO05D008207 5.7e-45 184.5 108 75.0
AUR62003565 Chenopodium quinoa HOM05D006465 ORTHO05D008207 1.7e-44 183.0 115 70.4
PSO017G4081 Papaver somniferum HOM05D006465 ORTHO05D008207 1.7e-44 183.0 119 68.1
TWI79G1280 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 1.7e-44 183.0 110 71.8
Potri.005G063100 Populus trichocarpa HOM05D006465 ORTHO05D008207 2.2e-44 182.6 145 60.7
SGA_v2.0_scaffold19G08773 Striga asiatica HOM05D006465 ORTHO05D008207 2.8e-44 182.2 139 60.4
BcaB08g37219 Brassica carinata HOM05D006465 ORTHO05D008207 3.7e-44 181.8 134 64.2
A10p27930 Brassica napus HOM05D006465 ORTHO05D008207 3.7e-44 181.8 134 64.9
CSS0043698 Camellia sinensis var. sinensis HOM05D006465 ORTHO05D008207 3.7e-44 181.8 112 70.5
CsaV3_2G018330 Cucumis sativus L. HOM05D006465 ORTHO05D008207 6.3e-44 181.0 134 65.7
BraA10t44842Z Brassica rapa HOM05D006465 ORTHO05D008207 8.2e-44 180.6 109 72.5
ECA247G0944 Erigeron canadensis HOM05D006465 ORTHO05D008207 1.1e-43 180.3 148 59.5
CANSAT01G2296 Cannabis sativa HOM05D006465 ORTHO05D008207 1.4e-43 179.9 110 72.7
Prupe.4G271100 Prunus persica HOM05D006465 ORTHO05D008207 1.4e-43 179.9 136 61.0
TWI75G0808 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 1.4e-43 179.9 109 70.6
THA.LOC104800074 Tarenaya hassleriana HOM05D006465 ORTHO05D008207 1.8e-43 179.5 142 62.0
unitig_88.g27767 Utricularia gibba HOM05D006465 ORTHO05D008207 1.8e-43 179.5 116 70.7
EL10Ac6g15303 Beta vulgaris HOM05D006465 ORTHO05D008207 2.4e-43 179.1 112 70.5
Thhalv10014951m.g Eutrema salsugineum HOM05D006465 ORTHO05D008207 2.4e-43 179.1 133 63.2
Medtr3g096320 Medicago truncatula HOM05D006465 ORTHO05D008207 2.4e-43 179.1 110 71.8
PSO170G5905 Papaver somniferum HOM05D006465 ORTHO05D008207 2.4e-43 179.1 119 67.2
PGR119G2011 Punica granatum HOM05D006465 ORTHO05D008207 2.4e-43 179.1 138 60.1
ClCG02G000500 Citrullus lanatus HOM05D006465 ORTHO05D008207 4.1e-43 178.3 116 70.7
Nn5g28548 Nelumbo nucifera HOM05D006465 ORTHO05D008207 5.3e-43 177.9 110 72.7
Sabra05G0052300 Salix brachista HOM05D006465 ORTHO05D008207 5.3e-43 177.9 112 68.8
A03p04100 Brassica napus HOM05D006465 ORTHO05D008207 6.9e-43 177.6 133 63.2
BolC3t12987H Brassica oleracea HOM05D006465 ORTHO05D008207 6.9e-43 177.6 133 63.2
BraA03t09753Z Brassica rapa HOM05D006465 ORTHO05D008207 6.9e-43 177.6 133 63.2
Ciclev10002814m.g Citrus clementina HOM05D006465 ORTHO05D008207 6.9e-43 177.6 110 69.1
SalBow7G2903 Salvia bowleyana HOM05D006465 ORTHO05D008207 6.9e-43 177.6 147 57.8
CARHR204090 Cardamine hirsuta HOM05D006465 ORTHO05D008207 9.1e-43 177.2 133 62.4
RcHm_v2.0_Chr6g0264391 Rosa chinensis HOM05D006465 ORTHO05D008207 9.1e-43 177.2 110 69.1
Haze_25235 Corylus avellana HOM05D006465 ORTHO05D008207 1.2e-42 176.8 141 57.4
DCAR_014336 Daucus carota HOM05D006465 ORTHO05D008207 1.2e-42 176.8 116 69.8
FvH4_2g08820 Fragaria vesca HOM05D006465 ORTHO05D008207 1.2e-42 176.8 134 62.7
FAN10G0435 Fragaria x ananassa HOM05D006465 ORTHO05D008207 1.2e-42 176.8 134 62.7
FAN15G0521 Fragaria x ananassa HOM05D006465 ORTHO05D008207 1.2e-42 176.8 134 62.7
Sed0005537 Sechium edule HOM05D006465 ORTHO05D008207 1.2e-42 176.8 116 69.0
Thecc.01G132600 Theobroma cacao HOM05D006465 ORTHO05D008207 1.2e-42 176.8 137 59.9
C03p04560 Brassica napus HOM05D006465 ORTHO05D008207 1.5e-42 176.4 133 62.4
HanXRQChr15g0491331 Helianthus annuus HOM05D006465 ORTHO05D008207 1.5e-42 176.4 138 60.9
Ca_16948_v3 Cicer arietinum L. HOM05D002517 ORTHO05D003040 2.0e-42 176.0 140 60.7
Ca_16968_v3 Cicer arietinum L. HOM05D006465 ORTHO05D008207 2.0e-42 176.0 140 60.7
Glyma.06G153700 Glycine max HOM05D006465 ORTHO05D008207 2.0e-42 176.0 110 71.8
Carub.0006s0786 Capsella rubella HOM05D006465 ORTHO05D008207 3.4e-42 175.3 146 58.9
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 3.4e-42 175.3 133 62.4
AL6G19700 Arabidopsis lyrata HOM05D006465 ORTHO05D008207 4.5e-42 174.9 146 59.6
Sp6g34010 Schrenkiella parvula HOM05D006465 ORTHO05D008207 5.9e-42 174.5 133 61.7
AT5G09310 Arabidopsis thaliana HOM05D006465 ORTHO05D008207 7.7e-42 174.1 109 69.7
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 7.7e-42 174.1 133 61.7
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 7.7e-42 174.1 133 61.7
TAR625G1289 Trochodendron aralioides HOM05D006465 ORTHO05D008207 7.7e-42 174.1 139 62.6
TPR.G28231 Trifolium pratense HOM05D006465 ORTHO05D008207 1.0e-41 173.7 110 70.0
Aqoxy5G02229 Aquilegia oxysepala HOM05D006465 ORTHO05D000054 1.3e-41 173.3 130 63.1
CiPaw.04G082200 Carya illinoinensis HOM05D006465 ORTHO05D008207 1.3e-41 173.3 123 62.6
CDE04G1235 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 1.7e-41 172.9 110 66.4
Oeu050125.1 Olea europaea HOM05D006465 ORTHO05D008207 2.2e-41 172.6 153 58.8
Glyma.04G212600 Glycine max HOM05D006465 ORTHO05D008207 6.5e-41 171.0 110 70.0
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 1.1e-40 170.2 130 60.8
Lj1g0025116 Lotus japonicus HOM05D006465 ORTHO05D008207 1.1e-40 170.2 143 58.0
Phvul.009G150900 Phaseolus vulgaris HOM05D006465 ORTHO05D008207 1.4e-40 169.9 127 63.0
Psat5g062320 Pisum sativum HOM05D006465 ORTHO05D008207 2.5e-40 169.1 140 57.1
Atru.chr4.901 Acer truncatum HOM05D006465 ORTHO05D008207 4.7e-39 164.9 141 58.2
arahy.Tifrunner.gnm1.ann1.X6LXMM Arachis hypogaea HOM05D006465 ORTHO05D008207 6.1e-39 164.5 121 62.8
HPP92_019397 Vanilla planifolia HOM05D006465 ORTHO05D008207 6.1e-39 164.5 142 56.3
Lalb_Chr08g0238351 Lupinus albus HOM05D006465 ORTHO05D008207 1.0e-38 163.7 143 56.6
Hund04414 Selenicereus undatus HOM05D006465 ORTHO05D008207 1.0e-38 163.7 165 50.3
VMungo1309G0274 Vigna mungo HOM05D006465 ORTHO05D008207 2.3e-38 162.5 137 58.4
MELO3C023238.2 Cucumis melo HOM05D006465 ORTHO05D008207 2.6e-37 159.1 157 54.1
arahy.Tifrunner.gnm1.ann1.Q2CXKS Arachis hypogaea HOM05D006465 ORTHO05D008207 4.4e-37 158.3 137 55.5
FAN24G0187 Fragaria x ananassa HOM05D006465 ORTHO05D008207 8.2e-36 154.1 122 61.5
ATR0138G005 Amborella trichopoda HOM05D006465 ORTHO05D008207 2.4e-35 152.5 114 61.4
Os01g0960000 Oryza sativa ssp. japonica HOM05D006465 ORTHO05D008207 7.0e-35 151.0 115 60.9
Zm00001eb362550 Zea mays HOM05D006465 ORTHO05D008207 7.0e-35 151.0 137 54.0
QL10p043584 Quercus lobata HOM05D006465 ORTHO05D008207 1.2e-34 150.2 150 50.0
FvH4_3g04510 Fragaria vesca HOM05D006465 ORTHO05D008207 1.5e-32 143.3 97 64.9
FAN11G3155 Fragaria x ananassa HOM05D006465 ORTHO05D008207 1.5e-32 143.3 97 66.0
AagrBONN_evm.TU.Sc2ySwM_117.2181 Anthoceros agrestis HOM05D006465 ORTHO05D008207 1.2e-29 133.7 108 54.6
Pp3c15_3010 Physcomitrium patens HOM05D006465 ORTHO05D008207 1.8e-27 126.3 105 55.2
Mapoly0113s0017 Marchantia polymorpha HOM05D006465 ORTHO05D008207 4.1e-27 125.2 109 48.6
SMO367G0154 Selaginella moellendorffii HOM05D006465 ORTHO05D008207 1.7e-25 119.8 109 51.4
SEGI_17702 Sequoiadendron giganteum HOM05D006465 ORTHO05D008207 1.1e-24 117.1 98 57.1
MD02G1262600 Malus domestica HOM05D006465 ORTHO05D008207 8.3e-20 100.9 86 55.8
vmacro20733 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 4.1e-19 98.6 53 83.0
Rhsim10G0133300 Rhododendron simsii HOM05D006465 ORTHO05D008207 5.4e-19 98.2 53 84.9
CDE12G0205 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 6.5e-17 91.3 51 68.6
CBR_g29852 Chara braunii HOM05D006465 ORTHO05D008207 6.5e-17 91.3 102 46.1
Nitab4.5_0003581g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 6.5e-17 91.3 57 77.2
Potri.007G106200 Populus trichocarpa HOM05D006465 ORTHO05D008207 6.5e-17 91.3 91 53.8
Lj4A838T21 Lonicera japonica HOM05D006465 ORTHO05D008207 1.1e-16 90.5 53 77.4
Cc00_g19040 Coffea canephora HOM05D006465 ORTHO05D008207 2.5e-16 89.4 59 67.8
Cc00_g31500 Coffea canephora HOM05D006465 ORTHO05D008207 1.2e-15 87.0 50 72.0
Lalb_Chr11g0068481 Lupinus albus HOM05D006465 ORTHO05D008207 3.0e-14 82.4 51 72.5
Eucgr.I00202 Eucalyptus grandis HOM05D006465 ORTHO05D008207 8.9e-14 80.9 48 68.8
BolC9t59563H Brassica oleracea HOM05D006465 ORTHO05D008207 1.3e-12 77.0 45 73.3
Lalb_Chr11g0068471 Lupinus albus HOM05D006465 ORTHO05D008207 1.3e-09 67.0 49 53.1
PRCOL_00001485 Prasinoderma coloniale HOM05D006465 ORTHO05D008207 7.3e-08 61.2 96 42.7
Cre07.g323050 Chlamydomonas reinhardtii HOM05D006465 ORTHO05D008207 5.2e-06 55.1 70 37.1


User provided reference genes

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