Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g027070 Solanum pennellii HOM05D001987 ORTHO05D006514 1.5e-98 362.8 177 100.0
Cfa023008 Carpinus fangiana HOM05D001987 ORTHO05D006514 4.7e-73 278.1 201 72.6
RhsimMtG0002600 Rhododendron simsii HOM05D001987 ORTHO05D006514 5.4e-69 264.6 201 69.7
Solyc00g500245.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.6e-68 263.1 141 91.5
Solyc00g500100.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.7e-68 262.3 140 92.1
Solyc00g500274.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.7e-68 262.3 140 92.1
Ca_30750_v3 Cicer arietinum L. HOM05D001987 ORTHO05D006514 4.6e-68 261.5 201 69.7
SalBow1G3504 Salvia bowleyana HOM05D001987 ORTHO05D006514 1.0e-67 260.4 159 83.6
SalBow1G4210 Salvia bowleyana HOM05D001987 ORTHO05D006514 1.0e-67 260.4 159 83.6
Solyc00g500309.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 6.6e-67 257.7 140 90.7
Psat7g012480 Pisum sativum HOM05D001987 ORTHO05D006514 1.2e-65 253.4 227 62.1
Solyc00g500117.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.2e-65 253.4 140 91.4
Dinv06676 Davidia involucrata HOM05D001987 ORTHO05D006514 1.2e-63 246.9 143 85.3
TAR358G0001 Trochodendron aralioides HOM05D001987 ORTHO05D006514 3.4e-63 245.4 143 85.3
Nn1g10074 Nelumbo nucifera HOM05D001987 ORTHO05D006514 7.5e-63 244.2 143 84.6
Solyc09g015850.4 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.9e-61 239.6 138 87.7
Actinidia34925 Actinidia chinensis HOM05D001987 ORTHO05D006514 4.1e-61 238.4 143 82.5
CANSAT16G0046 Cannabis sativa HOM05D001987 ORTHO05D006514 6.0e-60 234.6 143 82.5
arahy.Tifrunner.gnm1.ann1.TY26DT Arachis hypogaea HOM05D001987 ORTHO05D006514 2.5e-58 229.2 255 53.3
Aa31csc822G30 Aethionema arabicum HOM05D001987 ORTHO05D006514 3.3e-58 228.8 182 69.2
Lsat_1_v5_gn_0_38040 Lactuca sativa HOM05D001987 ORTHO05D006514 1.6e-57 226.5 143 81.1
Sp3g25720 Schrenkiella parvula HOM05D001987 ORTHO05D006514 3.6e-57 225.3 135 83.7
CARHR282630 Cardamine hirsuta HOM05D001987 ORTHO05D006514 4.7e-57 224.9 135 83.7
TPR.G26049 Trifolium pratense HOM05D001987 ORTHO05D006514 4.7e-57 224.9 143 79.7
ECA240G1514 Erigeron canadensis HOM05D001987 ORTHO05D006514 1.1e-56 223.8 143 80.4
arahy.Tifrunner.gnm1.ann1.8UR9GU Arachis hypogaea HOM05D001987 ORTHO05D006514 1.8e-56 223.0 271 50.2
arahy.Tifrunner.gnm1.ann1.K88Y93 Arachis hypogaea HOM05D001987 ORTHO05D006514 1.8e-56 223.0 271 50.2
HanXRQChr16g0504311 Helianthus annuus HOM05D001987 ORTHO05D006514 2.3e-56 222.6 146 79.5
HanXRQMTg0579601 Helianthus annuus HOM05D001987 ORTHO05D006514 2.3e-56 222.6 146 79.5
A04p09400 Brassica napus HOM05D001987 ORTHO05D006514 2.9e-54 215.7 135 81.5
BolSC28t60371H Brassica oleracea HOM05D001987 ORTHO05D006514 2.9e-54 215.7 135 81.5
BraSC159t45730Z Brassica rapa HOM05D001987 ORTHO05D006514 2.9e-54 215.7 135 81.5
arahy.Tifrunner.gnm1.ann1.7A4IEF Arachis hypogaea HOM05D001987 ORTHO05D006514 3.7e-54 215.3 146 76.0
HanXRQChr14g0433081 Helianthus annuus HOM05D001987 ORTHO05D006514 6.4e-54 214.5 146 77.4
ATMG00090 Arabidopsis thaliana HOM05D001987 ORTHO05D006514 5.4e-53 211.5 135 79.3
Lalb_Chr00c21g0405751 Lupinus albus HOM05D001987 ORTHO05D006514 3.5e-52 208.8 134 79.9
Lalb_Chr00c24g0407071 Lupinus albus HOM05D001987 ORTHO05D006514 3.5e-52 208.8 134 79.9
Ah.10g027970 Amaranthus hybridus HOM05D001987 ORTHO05D006514 2.3e-51 206.1 136 75.7
DCAR_032448 Daucus carota HOM05D001987 ORTHO05D006514 3.3e-50 202.2 146 71.9
Ah.02g118900 Amaranthus hybridus HOM05D001987 ORTHO05D006514 5.6e-50 201.4 136 73.5
Lj2P1221T93 Lonicera japonica HOM05D001987 ORTHO05D006514 3.6e-49 198.7 112 85.7
Gorai.001G161500 Gossypium raimondii HOM05D001987 ORTHO05D006514 9.9e-47 190.7 115 83.5
BolSC28t60315H Brassica oleracea HOM05D001987 ORTHO05D006514 2.9e-46 189.1 122 78.7
MELO3C028575.2 Cucumis melo HOM05D001987 ORTHO05D006514 3.5e-44 182.2 183 57.4
MBI05_g05348_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 3.5e-44 182.2 108 85.2
CsaV3_UNG208600 Cucumis sativus L. HOM05D001987 ORTHO05D006514 1.3e-43 180.3 178 59.0
MBI16_g09478_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 8.7e-43 177.6 108 83.3
HanXRQChr05g0147721 Helianthus annuus HOM05D001987 ORTHO05D006514 2.8e-41 172.6 146 66.4
SHI20096 Sapria himalayana HOM05D001987 ORTHO05D006514 4.0e-40 168.7 133 69.2
CAN.G1202.8 Capsicum annuum HOM05D001987 ORTHO05D006514 9.0e-40 167.5 91 92.3
Nitab4.5_0000309g0220 Nicotiana tabacum HOM05D001987 ORTHO05D006514 4.2e-37 158.7 91 86.8
SGA_v2.0_scaffold339G49282 Striga asiatica HOM05D001987 ORTHO05D006514 1.3e-35 153.7 136 61.8
Eucgr.H02719 Eucalyptus grandis HOM05D001987 ORTHO05D006514 1.9e-34 149.8 103 73.8
Lalb_Chr11g0070101 Lupinus albus HOM05D001987 ORTHO05D006514 9.6e-34 147.5 95 81.1
Solyc03g063770.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.3e-33 147.1 88 83.0
CDE02G0251 Ceratophyllum demersum HOM05D001987 ORTHO05D006514 1.4e-32 143.7 143 57.3
Hund28418 Selenicereus undatus HOM05D001987 ORTHO05D006514 9.0e-32 141.0 123 61.8
Hund29734 Selenicereus undatus HOM05D001987 ORTHO05D006514 9.0e-32 141.0 123 61.8
Hund29823 Selenicereus undatus HOM05D001987 ORTHO05D006514 9.0e-32 141.0 123 61.8
Hund30343 Selenicereus undatus HOM05D001987 ORTHO05D006514 9.0e-32 141.0 123 61.8
Hund30419 Selenicereus undatus HOM05D001987 ORTHO05D006514 9.0e-32 141.0 123 61.8
SGA_v2.0_scaffold255G45472 Striga asiatica HOM05D001987 ORTHO05D006514 1.3e-30 137.1 83 80.7
SHI29633 Sapria himalayana HOM05D001987 ORTHO05D006514 6.4e-30 134.8 144 54.9
Nitab4.5_0009703g0120 Nicotiana tabacum HOM05D001987 ORTHO05D006514 7.1e-29 131.3 72 90.3
Hund12658 Selenicereus undatus HOM05D001987 ORTHO05D006514 2.5e-26 122.9 123 55.3
Nitab4.5_0010565g0030 Nicotiana tabacum HOM05D000040 ORTHO05D000759 6.2e-25 118.2 84 71.4
Solyc05g045770.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.6e-23 112.8 69 76.8
Solyc12g035815.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.1e-21 107.5 122 52.5
Peaxi162Scf00238g00149 Petunia axillaris HOM05D001987 ORTHO05D006514 3.5e-20 102.4 62 82.3
Solyc05g045822.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.2e-15 87.4 70 61.4
BraSC48t46240Z Brassica rapa HOM05D001987 ORTHO05D006514 1.9e-13 80.1 66 66.7
Peaxi162Scf00934g00143 Petunia axillaris HOM05D001987 ORTHO05D006514 3.2e-13 79.3 86 51.2
CAN.G1542.10 Capsicum annuum HOM05D001987 ORTHO05D006514 1.3e-11 73.9 131 37.4
SHI01961 Sapria himalayana HOM05D001987 ORTHO05D006514 2.3e-11 73.2 110 44.5
Sopen05g027050 Solanum pennellii HOM05D001987 ORTHO05D004018 3.7e-09 65.9 31 96.8
CARHR288240 Cardamine hirsuta HOM05D001987 ORTHO05D006514 4.8e-09 65.5 33 93.9
CAN.G584.36 Capsicum annuum HOM05D010663 ORTHO05D011474 8.2e-09 64.7 36 80.6
PSO541G5803 Papaver somniferum HOM05D001987 ORTHO05D006514 1.1e-08 64.3 128 45.3
Nitab4.5_0001761g0040 Nicotiana tabacum HOM05D001987 ORTHO05D015637 3.8e-06 55.8 37 73.0
Nitab4.5_0005831g0010 Nicotiana tabacum HOM05D009456 ORTHO05D015637 3.8e-06 55.8 67 49.3


User provided reference genes

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