Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 2.6e-110 402.1 211 100.0
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 3.3e-105 385.2 204 99.0
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 1.8e-103 379.4 204 98.0
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 2.8e-96 355.5 204 93.1
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 1.4e-92 343.2 207 89.4
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 2.3e-87 325.9 208 86.1
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 2.5e-73 279.3 203 75.9
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 4.0e-71 271.9 198 77.3
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 5.4e-68 261.5 206 71.8
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 1.5e-65 253.4 196 73.5
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 1.6e-64 250.0 196 74.5
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 4.8e-64 248.4 195 70.3
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.2e-62 243.8 212 67.9
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 4.5e-62 241.9 196 69.9
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 5.8e-62 241.5 200 67.0
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 4.9e-61 238.4 197 69.0
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 1.9e-60 236.5 196 68.9
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 7.1e-60 234.6 211 63.5
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 2.1e-59 233.0 206 61.2
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 2.7e-59 232.6 207 64.7
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 4.6e-59 231.9 196 64.3
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 6.0e-59 231.5 196 66.8
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 6.0e-59 231.5 195 66.2
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 1.3e-58 230.3 196 70.4
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 2.3e-58 229.6 145 84.8
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 3.0e-58 229.2 205 60.5
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 3.9e-58 228.8 203 67.5
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 3.9e-58 228.8 205 60.5
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 3.9e-58 228.8 191 69.6
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 6.7e-58 228.0 204 60.8
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 8.7e-58 227.6 196 66.8
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 1.1e-57 227.3 193 67.4
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 1.1e-57 227.3 196 59.7
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 1.1e-57 227.3 206 63.1
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 1.5e-57 226.9 206 62.1
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 1.9e-57 226.5 212 65.1
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 2.5e-57 226.1 166 77.7
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 5.6e-57 224.9 180 71.7
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 7.4e-57 224.6 192 67.2
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 9.6e-57 224.2 197 67.0
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 9.6e-57 224.2 188 66.0
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 1.6e-56 223.4 196 66.3
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 1.6e-56 223.4 196 66.3
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 3.7e-56 222.2 167 74.9
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 3.7e-56 222.2 196 65.8
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 4.8e-56 221.9 152 78.9
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 6.2e-56 221.5 197 65.0
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 6.2e-56 221.5 195 66.2
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 1.4e-55 220.3 206 62.1
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 1.8e-55 219.9 196 65.8
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 2.4e-55 219.5 203 61.6
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 6.9e-55 218.0 199 60.3
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 9.0e-55 217.6 198 62.6
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 1.5e-54 216.9 203 61.6
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 2.6e-54 216.1 175 70.3
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 4.5e-54 215.3 151 78.1
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 7.6e-54 214.5 191 65.4
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 1.0e-53 214.2 146 80.1
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 1.7e-53 213.4 194 63.9
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 4.9e-53 211.8 193 60.6
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 8.4e-53 211.1 202 61.9
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 2.5e-52 209.5 201 64.7
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 3.2e-52 209.1 145 80.7
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 3.2e-52 209.1 195 65.1
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 3.2e-52 209.1 161 67.7
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 9.3e-52 207.6 149 77.9
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 1.2e-51 207.2 157 65.0
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 2.7e-51 206.1 148 75.7
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 3.5e-51 205.7 166 62.0
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 1.3e-50 203.8 194 60.8
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 2.3e-50 203.0 201 57.2
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 3.9e-50 202.2 145 79.3
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 6.7e-50 201.4 150 76.7
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 5.7e-49 198.4 145 76.6
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 7.4e-49 198.0 187 61.5
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 5.3e-47 191.8 149 75.2
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 2.0e-46 189.9 129 79.8
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 4.5e-46 188.7 129 83.7
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 5.0e-45 185.3 155 68.4
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 2.5e-44 183.0 149 72.5
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 4.6e-43 178.7 133 79.7
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 7.9e-43 177.9 120 75.0
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 5.1e-42 175.3 148 64.2
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 3.3e-41 172.6 145 66.2
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 3.2e-36 156.0 126 69.8
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 1.2e-30 137.5 145 55.9
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 2.3e-26 123.2 213 39.4
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.5e-25 120.6 73 93.2
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 4.5e-22 109.0 65 83.1
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 2.5e-12 76.6 41 95.1
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 2.5e-12 76.6 154 31.8
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 1.4e-10 70.9 169 33.1


User provided reference genes

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