Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 1.1e-87 326.6 163 100.0
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 1.1e-79 300.1 161 91.3
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 5.3e-63 244.6 166 76.5
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 5.0e-53 211.5 163 71.2
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 2.1e-51 206.1 165 66.7
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 5.2e-50 201.4 127 76.4
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 1.6e-46 189.9 129 71.3
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 6.5e-45 184.5 113 77.9
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 1.5e-44 183.3 124 71.8
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 3.2e-44 182.2 170 58.8
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 1.2e-43 180.3 143 62.9
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 2.7e-43 179.1 114 71.9
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 3.6e-43 178.7 157 58.0
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 2.3e-42 176.0 133 63.9
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 3.0e-42 175.6 134 65.7
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 3.0e-42 175.6 141 63.1
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 4.0e-42 175.3 136 64.7
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 4.0e-42 175.3 154 60.4
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 5.2e-42 174.9 108 75.0
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 8.8e-42 174.1 110 72.7
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 1.5e-41 173.3 158 58.9
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 3.4e-41 172.2 165 54.5
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 7.5e-41 171.0 168 54.2
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 7.5e-41 171.0 117 67.5
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 9.7e-41 170.6 147 61.2
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 1.7e-40 169.9 137 61.3
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 3.7e-40 168.7 155 61.9
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 4.8e-40 168.3 125 64.8
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 1.4e-39 166.8 121 66.1
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 1.8e-39 166.4 119 66.4
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 3.1e-39 165.6 122 66.4
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 4.1e-39 165.2 153 54.9
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 4.1e-39 165.2 154 58.4
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 1.6e-38 163.3 111 66.7
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.0e-38 162.9 157 52.2
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 2.0e-38 162.9 110 65.5
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 2.7e-38 162.5 111 66.7
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 7.7e-38 161.0 146 54.1
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 7.7e-38 161.0 146 54.1
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 2.2e-37 159.5 153 53.6
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 3.8e-37 158.7 157 51.6
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 5.0e-37 158.3 108 65.7
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 6.5e-37 157.9 151 58.3
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 6.5e-37 157.9 174 49.4
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.9e-36 156.4 157 50.3
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 1.9e-36 156.4 108 65.7
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 5.5e-36 154.8 141 57.4
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 5.5e-36 154.8 141 57.4
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 4.7e-35 151.8 112 59.8
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 4.7e-35 151.8 95 71.6
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 6.1e-35 151.4 170 48.8
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 8.0e-35 151.0 119 57.1
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 1.4e-34 150.2 147 55.8
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 1.8e-34 149.8 112 61.6
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 4.0e-34 148.7 224 40.2
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 9.8e-33 144.1 103 66.0
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 6.3e-32 141.4 162 46.9
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 6.3e-32 141.4 154 44.8
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 8.3e-32 141.0 159 45.9
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 1.4e-31 140.2 100 67.0
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 1.4e-31 140.2 107 60.7
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 1.8e-31 139.8 139 51.8
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 1.8e-31 139.8 162 47.5
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 1.8e-31 139.8 247 36.4
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 2.4e-31 139.4 197 41.6
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 2.4e-31 139.4 105 61.9
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 4.1e-31 138.7 127 53.5
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 4.1e-31 138.7 130 53.1
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 5.4e-31 138.3 107 55.1
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 9.1e-31 137.5 141 51.1
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 9.1e-31 137.5 112 55.4
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 9.1e-31 137.5 108 56.5
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 1.2e-30 137.1 107 60.7
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 1.2e-30 137.1 108 58.3
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 1.6e-30 136.7 137 52.6
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 1.6e-30 136.7 136 47.1
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.6e-30 136.7 160 45.0
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 1.6e-30 136.7 105 60.0
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 2.0e-30 136.3 153 44.4
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 2.0e-30 136.3 108 54.6
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 2.0e-30 136.3 111 57.7
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 2.7e-30 136.0 107 56.1
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 2.7e-30 136.0 108 53.7
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 4.5e-30 135.2 105 59.0
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 5.9e-30 134.8 140 49.3
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 7.7e-30 134.4 106 59.4
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 7.7e-30 134.4 126 51.6
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 7.7e-30 134.4 107 57.9
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 7.7e-30 134.4 107 57.9
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 1.0e-29 134.0 107 57.9
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 1.0e-29 134.0 107 57.9
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 1.0e-29 134.0 107 57.0
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 1.7e-29 133.3 159 44.0
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 2.3e-29 132.9 105 59.0
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 2.3e-29 132.9 134 51.5
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 2.3e-29 132.9 124 53.2
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 2.3e-29 132.9 161 46.0
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 2.3e-29 132.9 105 56.2
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 2.9e-29 132.5 147 47.6
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 3.8e-29 132.1 113 55.8
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 3.8e-29 132.1 113 55.8
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 3.8e-29 132.1 152 46.1
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 3.8e-29 132.1 164 44.5
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 3.8e-29 132.1 127 51.2
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 6.6e-29 131.3 119 53.8
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 6.6e-29 131.3 107 56.1
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 6.6e-29 131.3 93 64.5
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 6.6e-29 131.3 127 50.4
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 8.6e-29 131.0 141 47.5
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 1.1e-28 130.6 105 57.1
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 1.1e-28 130.6 137 49.6
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 1.1e-28 130.6 125 51.2
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 2.5e-28 129.4 102 58.8
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 3.3e-28 129.0 157 44.6
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 3.3e-28 129.0 111 52.3
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 4.2e-28 128.6 105 57.1
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 5.5e-28 128.3 108 54.6
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 5.5e-28 128.3 105 57.1
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 5.5e-28 128.3 125 50.4
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 7.2e-28 127.9 106 56.6
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 7.2e-28 127.9 105 56.2
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 7.2e-28 127.9 105 56.2
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 7.2e-28 127.9 105 56.2
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 7.2e-28 127.9 115 52.2
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 9.5e-28 127.5 105 56.2
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 9.5e-28 127.5 147 46.9
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 9.5e-28 127.5 147 46.9
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 9.5e-28 127.5 123 50.4
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 9.5e-28 127.5 171 45.0
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 9.5e-28 127.5 108 53.7
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 1.2e-27 127.1 105 55.2
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 1.2e-27 127.1 159 42.8
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 1.2e-27 127.1 147 46.9
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 1.2e-27 127.1 105 55.2
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 1.2e-27 127.1 102 57.8
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 2.1e-27 126.3 150 44.7
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 2.1e-27 126.3 105 55.2
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 2.1e-27 126.3 126 50.8
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 2.8e-27 125.9 105 54.3
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 2.8e-27 125.9 105 55.2
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 2.8e-27 125.9 147 46.3
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 2.8e-27 125.9 145 46.2
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 3.6e-27 125.6 126 50.8
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 8.0e-27 124.4 105 56.2
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 8.0e-27 124.4 162 43.2
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 8.0e-27 124.4 105 56.2
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 1.4e-26 123.6 139 46.8
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.8e-26 123.2 145 45.5
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.3e-26 122.9 145 45.5
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 2.3e-26 122.9 130 48.5
CAN.G1248.1 Capsicum annuum HOM05D003884 ORTHO05D004482 4.0e-26 122.1 100 66.0
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 4.0e-26 122.1 142 46.5
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 5.2e-26 121.7 101 54.5
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 5.2e-26 121.7 115 50.4
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 5.2e-26 121.7 134 49.3
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 6.8e-26 121.3 138 47.1
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 1.3e-24 117.1 141 40.4
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 4.1e-23 112.1 107 44.9
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 1.2e-22 110.5 62 79.0
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 1.0e-21 107.5 93 53.8
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 3.9e-21 105.5 158 41.1
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 3.3e-20 102.4 78 65.4
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 8.0e-19 97.8 155 38.1
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 1.8e-18 96.7 154 37.7
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 7.0e-15 84.7 58 63.8
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 9.2e-15 84.3 58 63.8
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 3.9e-13 79.0 59 57.6
Oeu001664.1 Olea europaea HOM05D003884 ORTHO05D004482 8.6e-13 77.8 57 63.2
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 1.1e-10 70.9 52 55.8
AagrBONN_evm.TU.Sc2ySwM_368.3177 Anthoceros agrestis HOM05D003884 ORTHO05D004482 2.3e-10 69.7 99 40.4
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 2.3e-10 69.7 98 44.9
Cc11_g14300 Coffea canephora HOM05D003884 ORTHO05D004482 3.1e-10 69.3 75 52.0
MD13G1087300 Malus domestica HOM05D003884 ORTHO05D004482 1.2e-09 67.4 67 53.7
TPR.G36109 Trifolium pratense HOM05D003884 ORTHO05D004482 2.6e-09 66.2 84 45.2
Lalb_Chr05g0217181 Lupinus albus HOM05D003884 ORTHO05D004482 3.4e-09 65.9 66 51.5
Nn3g16971 Nelumbo nucifera HOM05D003884 ORTHO05D004482 3.4e-09 65.9 52 61.5
HanXRQChr15g0476661 Helianthus annuus HOM05D003884 ORTHO05D004482 2.9e-08 62.8 86 39.5
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 3.7e-08 62.4 106 37.7
AUR62005315 Chenopodium quinoa HOM05D003884 ORTHO05D004482 3.7e-08 62.4 48 56.2
RcHm_v2.0_Chr4g0444421 Rosa chinensis HOM05D003884 ORTHO05D004482 4.9e-08 62.0 86 44.2
TPR.G39492 Trifolium pratense HOM05D003884 ORTHO05D004482 6.4e-08 61.6 58 44.8
CSS0019058 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 3.2e-07 59.3 129 36.4


User provided reference genes

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