Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g022720 Solanum pennellii HOM05D039878 ORTHO05D026739 2.0e-42 175.3 83 100.0
Peaxi162Scf00108g00112 Petunia axillaris HOM05D000155 ORTHO05D000022 2.2e-12 75.5 81 45.7
Nitab4.5_0006480g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.8e-12 75.1 81 48.1
Peaxi162Scf00160g01638 Petunia axillaris HOM05D000155 ORTHO05D000022 8.3e-12 73.6 81 42.0
PGSC0003DMG400046872 Solanum tuberosum HOM05D000003 ORTHO05D000022 1.1e-11 73.2 79 46.8
Solyc04g051295.1 Solanum lycopersicum HOM05D039878 ORTHO05D026739 2.7e-10 68.6 45 82.2
Nitab4.5_0000902g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.8e-09 64.7 60 53.3
Peaxi162Scf00236g00081 Petunia axillaris HOM05D000155 ORTHO05D000022 3.8e-09 64.7 61 49.2
Nitab4.5_0003475g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.0e-09 64.3 73 41.1
Nitab4.5_0004849g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.1e-08 63.2 81 37.0
Sopen09g017040 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-08 63.2 81 37.0
Sopen11g024140 Solanum pennellii HOM05D000155 ORTHO05D000022 1.1e-08 63.2 50 58.0
PGSC0003DMG400037470 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.5e-08 62.8 80 35.0
PGSC0003DMG400040069 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.5e-08 62.8 79 36.7
Sopen11g007990 Solanum pennellii HOM05D000155 ORTHO05D000022 1.9e-08 62.4 80 33.8
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 3.2e-08 61.6 78 37.2
Sopen05g018040 Solanum pennellii HOM05D000155 ORTHO05D000022 4.2e-08 61.2 79 39.2
Nitab4.5_0002286g0110 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.5e-08 60.8 61 49.2
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 7.2e-08 60.5 80 36.2
Sopen01g005170 Solanum pennellii HOM05D000155 ORTHO05D000022 7.2e-08 60.5 87 39.1
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 7.2e-08 60.5 81 37.0
Sopen07g021380 Solanum pennellii HOM05D000155 ORTHO05D000034 7.2e-08 60.5 87 39.1
Nitab4.5_0000062g0590 Nicotiana tabacum HOM05D000155 ORTHO05D000022 9.4e-08 60.1 62 43.5
PGSC0003DMG400040103 Solanum tuberosum HOM05D000003 ORTHO05D000022 9.4e-08 60.1 81 38.3
MBI11_g05091_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.2e-07 59.7 60 48.3
MBI16_g26329_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.2e-07 59.7 66 42.4
Nitab4.5_0007215g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-07 59.7 86 45.3
Peaxi162Scf00078g00215 Petunia axillaris HOM05D000155 ORTHO05D000022 1.2e-07 59.7 81 39.5
PGSC0003DMG400041121 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.2e-07 59.7 80 38.8
MBI07_g35365_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.6e-07 59.3 46 50.0
MBI14_g28582_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.6e-07 59.3 50 52.0
Nitab4.5_0005104g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.6e-07 59.3 81 38.3
QL08p019214 Quercus lobata HOM05D016036 ORTHO05D000022 1.6e-07 59.3 54 51.9
Sopen02g028750 Solanum pennellii HOM05D000155 ORTHO05D000022 1.6e-07 59.3 50 52.0
Sopen05g017830 Solanum pennellii HOM05D000004 ORTHO05D000022 1.6e-07 59.3 79 34.2
Sopen06g016720 Solanum pennellii HOM05D000024 ORTHO05D017131 1.6e-07 59.3 64 42.2
Nitab4.5_0000718g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.1e-07 58.9 71 42.3
Sopen11g007870 Solanum pennellii HOM05D000155 ORTHO05D000007 2.1e-07 58.9 80 35.0
MBI01_g12906_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.7e-07 58.5 43 58.1
MBI07_g35233_MAGBIO Magnolia biondii HOM05D000097 ORTHO05D000041 2.7e-07 58.5 44 56.8
MBI18_g07591_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 2.7e-07 58.5 71 43.7
MBI19_g04943_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.7e-07 58.5 44 52.3
MBI15_g39376_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.6e-07 58.2 43 55.8
MBI16_g36773_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.6e-07 58.2 44 56.8
Peaxi162Scf00018g02311 Petunia axillaris HOM05D000155 ORTHO05D000022 3.6e-07 58.2 64 42.2
Peaxi162Scf00263g00419 Petunia axillaris HOM05D000155 ORTHO05D026739 3.6e-07 58.2 61 42.6
PGSC0003DMG400045895 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.6e-07 58.2 80 37.5
MBI15_g07207_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.7e-07 57.8 44 56.8
MBI15_g26842_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.7e-07 57.8 60 46.7
Peaxi162Scf00100g00613 Petunia axillaris HOM05D000155 ORTHO05D000022 4.7e-07 57.8 81 35.8
Sopen00g003380 Solanum pennellii HOM05D000155 ORTHO05D000022 4.7e-07 57.8 79 35.4
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 4.7e-07 57.8 79 35.4
MBI15_g21039_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.1e-07 57.4 44 50.0
MBI18_g13610_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.1e-07 57.4 43 55.8
Peaxi162Scf00188g00934 Petunia axillaris HOM05D000155 ORTHO05D000022 6.1e-07 57.4 64 43.8
Peaxi162Scf01249g00004 Petunia axillaris HOM05D000155 ORTHO05D000022 6.1e-07 57.4 66 45.5
Sopen08g015220 Solanum pennellii HOM05D000024 ORTHO05D000007 6.1e-07 57.4 79 38.0
Sopen08g020500 Solanum pennellii HOM05D000155 ORTHO05D000022 6.1e-07 57.4 81 35.8
Sopen12g016250 Solanum pennellii HOM05D000003 ORTHO05D000004 6.1e-07 57.4 80 33.8
CAN.G1598.9 Capsicum annuum HOM05D000155 ORTHO05D000022 8.0e-07 57.0 77 39.0
MBI07_g15429_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.0e-07 57.0 44 54.5
MBI07_g22360_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.0e-07 57.0 44 54.5
MBI07_g41529_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.0e-07 57.0 44 52.3
MBI09_g03206_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.0e-07 57.0 43 53.5
MBI09_g40767_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.0e-07 57.0 44 50.0
MBI11_g19496_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 8.0e-07 57.0 44 54.5
MBI13_g15302_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.0e-07 57.0 44 50.0
MBI16_g24671_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.0e-07 57.0 55 43.6
SHI10451 Sapria himalayana HOM05D000155 ORTHO05D000022 8.0e-07 57.0 41 61.0
Sopen05g017800 Solanum pennellii HOM05D000155 ORTHO05D000022 8.0e-07 57.0 79 38.0
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 8.0e-07 57.0 79 32.9
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 8.0e-07 57.0 78 34.6
MBI12_g01340_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.0e-06 56.6 61 39.3
MBI15_g44988_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.0e-06 56.6 44 50.0
MBI16_g11026_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.0e-06 56.6 44 52.3
MBI18_g06638_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.0e-06 56.6 43 53.5
MBI18_g23708_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.0e-06 56.6 43 53.5
MBI18_g23784_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.0e-06 56.6 39 61.5
MBI19_g34996_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.0e-06 56.6 39 61.5
MBI19_g35484_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.0e-06 56.6 44 50.0
Nitab4.5_0000469g0240 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.0e-06 56.6 76 38.2
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-06 56.6 65 44.6
Sopen01g005290 Solanum pennellii HOM05D000155 ORTHO05D000022 1.0e-06 56.6 81 34.6
Sopen09g028340 Solanum pennellii HOM05D000003 ORTHO05D000006 1.0e-06 56.6 69 37.7
MBI05_g02409_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.4e-06 56.2 44 56.8
MBI11_g29577_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.4e-06 56.2 44 54.5
MBI11_g43230_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.4e-06 56.2 44 54.5
MBI16_g05381_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D000852 1.4e-06 56.2 62 46.8
MBI16_g11674_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.4e-06 56.2 44 50.0
Nitab4.5_0000692g0240 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.4e-06 56.2 64 43.8
Nitab4.5_0012527g0020 Nicotiana tabacum HOM05D001995 ORTHO05D000022 1.4e-06 56.2 43 53.5
MBI04_g43365_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.8e-06 55.8 42 61.9
MBI05_g29694_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.8e-06 55.8 44 52.3
MBI16_g05639_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.8e-06 55.8 43 53.5
MBI04_g06615_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.3e-06 55.5 44 50.0
MBI14_g11704_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.3e-06 55.5 56 46.4
MBI14_g39709_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.3e-06 55.5 48 45.8
Nitab4.5_0000036g0160 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.3e-06 55.5 82 37.8
QL04p014896 Quercus lobata HOM05D000003 ORTHO05D000022 2.3e-06 55.5 47 46.8
Sopen06g012050 Solanum pennellii HOM05D000155 ORTHO05D000022 2.3e-06 55.5 81 33.3
PGSC0003DMG400035792 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.3e-06 55.5 81 38.3
Aqoxy4G00553 Aquilegia oxysepala HOM05D039878 ORTHO05D026739 3.0e-06 55.1 47 57.4
Cc00_g03270 Coffea canephora HOM05D000155 ORTHO05D000022 3.0e-06 55.1 82 37.8
Cc00_g05820 Coffea canephora HOM05D000155 ORTHO05D000022 3.0e-06 55.1 82 37.8
MBI01_g25635_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.0e-06 55.1 37 64.9
MBI07_g19050_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.0e-06 55.1 62 43.5
MBI08_g09145_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.0e-06 55.1 83 38.6
MBI11_g19465_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.0e-06 55.1 63 42.9
MBI14_g01722_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.0e-06 55.1 43 48.8
MBI14_g11584_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 3.0e-06 55.1 43 55.8
MBI18_g13460_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.0e-06 55.1 43 51.2
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 3.0e-06 55.1 79 35.4
PGSC0003DMG400037358 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.0e-06 55.1 49 46.9
MBI01_g21234_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.0e-06 54.7 44 50.0
MBI07_g24347_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.0e-06 54.7 44 52.3
MBI09_g18090_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.0e-06 54.7 44 50.0
MBI14_g25729_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.0e-06 54.7 43 51.2
MBI15_g25771_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.0e-06 54.7 43 48.8
MBI16_g27544_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.0e-06 54.7 60 43.3
Nitab4.5_0000240g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.0e-06 54.7 79 36.7
Nitab4.5_0010696g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.0e-06 54.7 61 44.3
Peaxi162Scf01249g00027 Petunia axillaris HOM05D000155 ORTHO05D000022 4.0e-06 54.7 61 45.9
Sopen01g016010 Solanum pennellii HOM05D000003 ORTHO05D000022 4.0e-06 54.7 61 39.3
MBI03_g12752_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.2e-06 54.3 43 53.5
MBI05_g34248_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.2e-06 54.3 54 40.7
MBI08_g09885_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.2e-06 54.3 44 47.7
MBI12_g26631_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.2e-06 54.3 44 50.0
MBI13_g20247_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.2e-06 54.3 46 47.8
MBI15_g14062_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.2e-06 54.3 43 51.2
Nitab4.5_0000061g0130 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.2e-06 54.3 43 55.8
Nitab4.5_0001442g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.2e-06 54.3 82 36.6
QL04p030886 Quercus lobata HOM05D000155 ORTHO05D000022 5.2e-06 54.3 39 59.0
QL07p031943 Quercus lobata HOM05D000155 ORTHO05D000022 5.2e-06 54.3 46 47.8
Sopen02g002350 Solanum pennellii HOM05D000014 ORTHO05D000016 5.2e-06 54.3 81 33.3
ATR0626G376 Amborella trichopoda HOM05D004588 ORTHO05D005365 6.8e-06 53.9 42 54.8
Cpa.g.sc263.16 Carica papaya HOM05D000003 ORTHO05D000022 6.8e-06 53.9 42 50.0
Cc11_g02100 Coffea canephora HOM05D000003 ORTHO05D000022 6.8e-06 53.9 43 51.2
MBI03_g01396_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.8e-06 53.9 43 53.5
MBI06_g27704_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.8e-06 53.9 39 59.0
MBI07_g16920_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.8e-06 53.9 44 50.0
MBI07_g23924_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.8e-06 53.9 43 46.5
MBI16_g46372_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.8e-06 53.9 44 50.0
MBI18_g15854_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.8e-06 53.9 44 50.0
MBI18_g36119_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.8e-06 53.9 51 47.1
MBI19_g00863_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.8e-06 53.9 51 41.2
Nitab4.5_0005719g0060 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.8e-06 53.9 55 49.1
PGR119G2417 Punica granatum HOM05D000003 ORTHO05D000004 6.8e-06 53.9 41 51.2
SHI38779 Sapria himalayana HOM05D000155 ORTHO05D000022 6.8e-06 53.9 41 56.1
CiPaw.04G137600 Carya illinoinensis HOM05D000155 ORTHO05D000022 8.8e-06 53.5 76 40.8
AUR62014524 Chenopodium quinoa HOM05D001049 ORTHO05D005951 8.8e-06 53.5 40 57.5
AUR62019983 Chenopodium quinoa HOM05D000577 ORTHO05D001093 8.8e-06 53.5 44 54.5
MBI01_g13069_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.8e-06 53.5 49 42.9
MBI03_g03959_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 8.8e-06 53.5 49 46.9
MBI13_g43496_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.8e-06 53.5 44 50.0
MBI14_g13875_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.8e-06 53.5 57 45.6
MBI14_g44640_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.8e-06 53.5 44 47.7
MBI17_g38043_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.8e-06 53.5 56 42.9
PGR031G0166 Punica granatum HOM05D000155 ORTHO05D000022 8.8e-06 53.5 37 56.8
QL02p058259 Quercus lobata HOM05D000155 ORTHO05D000022 8.8e-06 53.5 51 49.0
QL93p0100_0664 Quercus lobata HOM05D000155 ORTHO05D000022 8.8e-06 53.5 51 49.0
Sopen02g008700 Solanum pennellii HOM05D000003 ORTHO05D000022 8.8e-06 53.5 81 34.6
Sopen09g009790 Solanum pennellii HOM05D000155 ORTHO05D000022 8.8e-06 53.5 81 32.1
PGSC0003DMG400014751 Solanum tuberosum HOM05D000155 ORTHO05D000022 8.8e-06 53.5 80 31.2


User provided reference genes

Program Settings