Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g019580 Solanum pennellii HOM05D040192 ORTHO05D037681 1.6e-82 309.3 153 100.0
PGSC0003DMG400044753 Solanum tuberosum HOM05D000024 ORTHO05D000007 5.2e-28 128.3 160 42.5
Sopen06g013950 Solanum pennellii HOM05D000003 ORTHO05D000004 7.8e-24 114.4 138 45.7
PGSC0003DMG400034636 Solanum tuberosum HOM05D000024 ORTHO05D000007 8.6e-23 110.9 151 41.7
PGSC0003DMG400034828 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.1e-22 110.5 84 57.1
PGSC0003DMG400043914 Solanum tuberosum HOM05D008663 ORTHO05D017125 1.1e-22 110.5 139 41.0
PGSC0003DMG400041338 Solanum tuberosum HOM05D000024 ORTHO05D000007 2.5e-22 109.4 150 39.3
PGSC0003DMG400044928 Solanum tuberosum HOM05D000024 ORTHO05D000007 5.6e-22 108.2 104 49.0
Sopen00g003400 Solanum pennellii HOM05D000024 ORTHO05D000007 3.6e-21 105.5 140 39.3
Sopen11g007870 Solanum pennellii HOM05D000155 ORTHO05D000007 3.6e-21 105.5 154 40.9
PGSC0003DMG400036258 Solanum tuberosum HOM05D012066 ORTHO05D017133 3.6e-21 105.5 159 39.6
PGSC0003DMG400036761 Solanum tuberosum HOM05D000024 ORTHO05D000007 3.6e-21 105.5 105 46.7
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-20 104.0 83 53.0
Sopen07g013630 Solanum pennellii HOM05D000003 ORTHO05D000007 1.4e-20 103.6 151 40.4
Sopen00g007260 Solanum pennellii HOM05D000003 ORTHO05D000004 2.3e-20 102.8 154 39.6
Sopen06g013970 Solanum pennellii HOM05D000003 ORTHO05D000004 2.3e-20 102.8 157 36.3
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 3.1e-20 102.4 154 40.3
Sopen09g030960 Solanum pennellii HOM05D000003 ORTHO05D000004 4.0e-20 102.1 152 36.2
Sopen00g009370 Solanum pennellii HOM05D000024 ORTHO05D000006 5.2e-20 101.7 154 39.6
Sopen04g008890 Solanum pennellii HOM05D015646 ORTHO05D017131 6.8e-20 101.3 153 37.9
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 8.9e-20 100.9 81 51.9
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-19 100.5 169 36.7
Sopen11g018190 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-19 100.5 162 35.2
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 1.5e-19 100.1 137 40.1
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 1.5e-19 100.1 80 52.5
PGSC0003DMG400041868 Solanum tuberosum HOM05D000024 ORTHO05D000007 2.0e-19 99.8 110 43.6
Sopen08g013110 Solanum pennellii HOM05D000024 ORTHO05D000007 2.6e-19 99.4 75 56.0
Sopen08g017350 Solanum pennellii HOM05D000047 ORTHO05D000589 3.4e-19 99.0 136 37.5
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 5.8e-19 98.2 143 39.9
PGSC0003DMG400034645 Solanum tuberosum HOM05D000024 ORTHO05D000007 5.8e-19 98.2 136 39.7
PGSC0003DMG400043899 Solanum tuberosum HOM05D010285 ORTHO05D011400 7.5e-19 97.8 87 49.4
Sopen02g009750 Solanum pennellii HOM05D000003 ORTHO05D026164 1.3e-18 97.1 71 57.7
Sopen04g015570 Solanum pennellii HOM05D000024 ORTHO05D000007 3.7e-18 95.5 150 37.3
Sopen09g015050 Solanum pennellii HOM05D000003 ORTHO05D000004 3.7e-18 95.5 71 56.3
Sopen11g002790 Solanum pennellii HOM05D000024 ORTHO05D000007 1.9e-17 93.2 139 38.8
Sopen05g017810 Solanum pennellii HOM05D020245 ORTHO05D000007 5.4e-17 91.7 69 59.4
Sopen07g013580 Solanum pennellii HOM05D000024 ORTHO05D000007 5.4e-17 91.7 90 50.0
Sopen09g015020 Solanum pennellii HOM05D000024 ORTHO05D000007 7.1e-17 91.3 144 37.5
PGSC0003DMG400047130 Solanum tuberosum HOM05D000024 ORTHO05D000007 9.2e-17 90.9 87 46.0
Sopen07g013730 Solanum pennellii HOM05D000003 ORTHO05D000004 2.1e-16 89.7 139 38.8
PGSC0003DMG400042088 Solanum tuberosum HOM05D000024 ORTHO05D011127 7.8e-16 87.8 54 64.8
Sopen11g007960 Solanum pennellii HOM05D008562 ORTHO05D011465 3.0e-15 85.9 71 49.3
Sopen05g020310 Solanum pennellii HOM05D008966 ORTHO05D011127 8.6e-15 84.3 117 37.6
Sopen11g007970 Solanum pennellii HOM05D000014 ORTHO05D000016 1.5e-14 83.6 68 52.9
PGSC0003DMG400029909 Solanum tuberosum HOM05D000024 ORTHO05D000022 1.9e-14 83.2 140 34.3
Sopen09g028340 Solanum pennellii HOM05D000003 ORTHO05D000006 2.1e-13 79.7 136 33.1
Sopen03g013510 Solanum pennellii HOM05D000014 ORTHO05D000016 4.7e-13 78.6 52 59.6
Sopen10g014780 Solanum pennellii HOM05D055428 ORTHO05D000007 7.6e-11 71.2 130 36.2
PGSC0003DMG400038794 Solanum tuberosum HOM05D000024 ORTHO05D000007 7.6e-11 71.2 84 41.7
PGSC0003DMG400044364 Solanum tuberosum HOM05D010285 ORTHO05D000007 2.9e-10 69.3 121 36.4
Peaxi162Scf00700g00051 Petunia axillaris HOM05D000070 ORTHO05D002524 4.9e-10 68.6 87 39.1
PGSC0003DMG400046747 Solanum tuberosum HOM05D010285 ORTHO05D000007 1.4e-09 67.0 62 48.4
Nitab4.5_0001349g0120 Nicotiana tabacum HOM05D013592 ORTHO05D049377 1.9e-09 66.6 53 49.1
Solyc03g051620.3 Solanum lycopersicum HOM05D040192 ORTHO05D037681 3.2e-09 65.9 86 45.3
Nitab4.5_0007267g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.4e-09 65.1 108 37.0
Nitab4.5_0004401g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.1e-09 64.7 71 45.1
Sopen08g015180 Solanum pennellii HOM05D000003 ORTHO05D000004 9.2e-09 64.3 44 54.5
PGSC0003DMG400042385 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.6e-08 63.5 74 35.1
Nitab4.5_0000422g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-08 63.2 140 36.4
SHI45021 Sapria himalayana HOM05D000024 ORTHO05D000007 2.7e-08 62.8 72 43.1
Nitab4.5_0000195g0190 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-08 62.4 101 31.7
Nitab4.5_0006025g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.6e-08 62.0 74 36.5
Sopen09g017040 Solanum pennellii HOM05D000003 ORTHO05D000004 4.6e-08 62.0 70 42.9
HPP92_000871 Vanilla planifolia HOM05D000024 ORTHO05D000007 4.6e-08 62.0 60 45.0
Nitab4.5_0000175g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.0e-08 61.6 87 36.8
HPP92_008755 Vanilla planifolia HOM05D000024 ORTHO05D000007 6.0e-08 61.6 60 45.0
Nitab4.5_0002004g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.8e-08 61.2 60 46.7
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-07 60.8 130 32.3
Nitab4.5_0000109g0440 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-07 60.5 134 30.6
Nitab4.5_0007825g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-07 60.5 86 38.4
Nitab4.5_0009493g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-07 60.5 92 39.1
Nitab4.5_0001569g0180 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-07 60.1 67 43.3
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-07 59.7 75 41.3
CAN.G128.121 Capsicum annuum HOM05D001907 ORTHO05D015557 3.0e-07 59.3 53 47.2
Nitab4.5_0003374g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-07 59.3 107 35.5
Sopen10g010950 Solanum pennellii HOM05D000003 ORTHO05D000007 3.9e-07 58.9 50 48.0
Nitab4.5_0002177g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.6e-07 58.2 73 43.8
Nitab4.5_0000098g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.6e-07 57.8 136 30.9
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.6e-07 57.8 72 40.3
Nitab4.5_0001783g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.6e-07 57.8 61 45.9
Nitab4.5_0007752g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-06 57.4 85 34.1
Nitab4.5_0003397g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-06 57.0 88 36.4
Nitab4.5_0003921g0010 Nicotiana tabacum HOM05D014359 ORTHO05D000007 1.5e-06 57.0 74 36.5
Nitab4.5_0004658g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-06 57.0 88 36.4
Nitab4.5_0015178g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-06 57.0 92 34.8
SHI37790 Sapria himalayana HOM05D000024 ORTHO05D000007 1.5e-06 57.0 100 36.0
CAN.G1139.21 Capsicum annuum HOM05D000024 ORTHO05D000007 1.9e-06 56.6 75 40.0
Nitab4.5_0000164g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-06 56.6 75 38.7
Nitab4.5_0015860g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.9e-06 56.6 73 39.7
Nitab4.5_0000002g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-06 56.2 85 34.1
Nitab4.5_0000099g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-06 56.2 59 44.1
Nitab4.5_0002170g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-06 56.2 87 34.5
Nitab4.5_0002909g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-06 56.2 129 27.9
Lj3P34T24 Lonicera japonica HOM05D000024 ORTHO05D000007 3.3e-06 55.8 57 45.6
Nitab4.5_0000082g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-06 55.8 134 33.6
Nitab4.5_0000092g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-06 55.8 99 32.3
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-06 55.8 75 37.3
Nitab4.5_0000417g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-06 55.8 94 36.2
SHI24141 Sapria himalayana HOM05D000024 ORTHO05D000007 3.3e-06 55.8 102 35.3
SHI30264 Sapria himalayana HOM05D000024 ORTHO05D000007 3.3e-06 55.8 73 38.4
Nitab4.5_0000481g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-06 55.5 141 29.1
Nitab4.5_0003729g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-06 55.5 139 30.2
Peaxi162Scf00709g00322 Petunia axillaris HOM05D000024 ORTHO05D000007 4.3e-06 55.5 53 35.8
Nitab4.5_0000370g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-06 55.1 93 34.4
Nitab4.5_0000961g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-06 55.1 86 37.2
Nitab4.5_0001130g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-06 55.1 88 35.2
Nitab4.5_0003255g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-06 55.1 168 30.4
Nitab4.5_0003516g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-06 55.1 91 34.1
Nitab4.5_0000102g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.3e-06 54.7 75 41.3
Nitab4.5_0003236g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.3e-06 54.7 73 38.4
SHI45473 Sapria himalayana HOM05D000024 ORTHO05D000007 7.3e-06 54.7 69 40.6
Nitab4.5_0000329g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.6e-06 54.3 88 31.8
Nitab4.5_0000721g0270 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.6e-06 54.3 75 36.0
Nitab4.5_0002416g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.6e-06 54.3 79 41.8
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.6e-06 54.3 145 34.5
Peaxi162Scf00330g01114 Petunia axillaris HOM05D000801 ORTHO05D014243 9.6e-06 54.3 60 41.7
Solyc09g059390.2 Solanum lycopersicum HOM05D000024 ORTHO05D000007 9.6e-06 54.3 87 31.0
Sopen05g017790 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-06 54.3 87 37.9


User provided reference genes

Program Settings