Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g013620 Solanum pennellii HOM05D006394 ORTHO05D008057 2.7e-70 268.5 130 100.0
Solyc03g033560.3 Solanum lycopersicum HOM05D006394 ORTHO05D008057 4.9e-35 151.4 77 88.3
Sopen03g006350 Solanum pennellii HOM05D006394 ORTHO05D008057 4.9e-35 151.4 77 88.3
CAN.G1735.1 Capsicum annuum HOM05D006394 ORTHO05D008057 3.5e-33 145.2 78 85.9
PGSC0003DMG400022563 Solanum tuberosum HOM05D006394 ORTHO05D008057 5.1e-32 141.4 77 85.7
Nitab4.5_0000438g0030 Nicotiana tabacum HOM05D006394 ORTHO05D008057 3.7e-27 125.2 86 70.9
Nitab4.5_0006119g0030 Nicotiana tabacum HOM05D006394 ORTHO05D008057 3.7e-27 125.2 86 72.1
Peaxi162Scf00034g02720 Petunia axillaris HOM05D006394 ORTHO05D008057 3.0e-24 115.5 96 61.5
Hma1.2p1_0589F.1_g184775 Hydrangea macrophylla HOM05D006394 ORTHO05D008057 3.4e-20 102.1 78 64.1
Hma1.2p1_0743F.1_g211600 Hydrangea macrophylla HOM05D006394 ORTHO05D008057 5.8e-20 101.3 78 62.8
CiPaw.07G057900 Carya illinoinensis HOM05D006394 ORTHO05D008057 9.9e-20 100.5 76 61.8
QL06p032614 Quercus lobata HOM05D006394 ORTHO05D008057 2.4e-18 95.9 78 59.0
CSS0039773 Camellia sinensis var. sinensis HOM05D006394 ORTHO05D008057 4.2e-18 95.1 78 60.3
Dinv33624 Davidia involucrata HOM05D006394 ORTHO05D008057 5.4e-18 94.7 76 63.2
TAR133G0002 Trochodendron aralioides HOM05D006394 ORTHO05D008057 5.4e-18 94.7 79 59.5
HanXRQChr14g0441351 Helianthus annuus HOM05D006394 ORTHO05D008057 9.2e-18 94.0 76 59.2
Cpa.g.sc6.241 Carica papaya HOM05D006394 ORTHO05D008057 1.2e-17 93.6 80 56.2
GSVIVG01018789001 Vitis vinifera HOM05D006394 ORTHO05D008057 2.7e-17 92.4 77 58.4
TAR365G0979 Trochodendron aralioides HOM05D006394 ORTHO05D008057 4.6e-17 91.7 79 59.5
Duzib264G0144 Durio zibethinus HOM05D006394 ORTHO05D008057 6.0e-17 91.3 80 58.8
Solyc10g038030.3 Solanum lycopersicum HOM05D006394 ORTHO05D008057 6.0e-17 91.3 54 74.1
CsaV3_6G047020 Cucumis sativus L. HOM05D006394 ORTHO05D008057 1.0e-16 90.5 77 58.4
ClCG01G020230 Citrullus lanatus HOM05D006394 ORTHO05D008057 1.7e-16 89.7 77 58.4
Haze_03772 Corylus avellana HOM05D006394 ORTHO05D008057 2.3e-16 89.4 78 55.1
Sed0000291 Sechium edule HOM05D006394 ORTHO05D008057 2.3e-16 89.4 77 55.8
Cc07_g10630 Coffea canephora HOM05D006394 ORTHO05D008057 3.0e-16 89.0 78 55.1
MELO3C007895.2 Cucumis melo HOM05D006394 ORTHO05D008057 3.0e-16 89.0 77 57.1
ECA238G0838 Erigeron canadensis HOM05D006394 ORTHO05D008057 1.1e-15 87.0 75 56.0
Migut.H01156 Erythranthe guttata HOM05D006394 ORTHO05D008057 1.5e-15 86.7 78 57.7
Lj2C467T3 Lonicera japonica HOM05D006394 ORTHO05D008057 1.5e-15 86.7 80 57.5
Nn6g32361 Nelumbo nucifera HOM05D006394 ORTHO05D008057 1.9e-15 86.3 79 54.4
Rhsim10G0213000 Rhododendron simsii HOM05D006394 ORTHO05D008057 1.9e-15 86.3 78 56.4
Gohir.A10G098200 Gossypium hirsutum HOM05D006394 ORTHO05D008057 2.5e-15 85.9 80 57.5
Thecc.01G019800 Theobroma cacao HOM05D006394 ORTHO05D008057 4.3e-15 85.1 80 53.8
Gohir.D10G090000 Gossypium hirsutum HOM05D006394 ORTHO05D008057 5.6e-15 84.7 80 56.2
Gorai.011G098800 Gossypium raimondii HOM05D006394 ORTHO05D008057 5.6e-15 84.7 80 56.2
Potri.005G115100 Populus trichocarpa HOM05D006394 ORTHO05D008057 5.6e-15 84.7 79 55.7
Sabra05G0094200 Salix brachista HOM05D006394 ORTHO05D008057 5.6e-15 84.7 81 55.6
CANSAT01G2157 Cannabis sativa HOM05D006394 ORTHO05D008057 7.3e-15 84.3 78 53.8
Manes.01G145300 Manihot esculenta HOM05D006394 ORTHO05D008057 7.3e-15 84.3 80 52.5
SalBow3G1310 Salvia bowleyana HOM05D006394 ORTHO05D008057 7.3e-15 84.3 80 48.8
vmacro21917 Vaccinium macrocarpon HOM05D006394 ORTHO05D008057 7.3e-15 84.3 78 55.1
COL.COLO4_21919 Corchorus olitorius HOM05D006394 ORTHO05D008057 2.1e-14 82.8 71 52.1
Ciclev10025906m.g Citrus clementina HOM05D006394 ORTHO05D008057 2.8e-14 82.4 76 51.3
PSO541G5117 Papaver somniferum HOM05D006394 ORTHO05D008057 1.4e-13 80.1 78 48.7
PSO675G2528 Papaver somniferum HOM05D006394 ORTHO05D008057 1.8e-13 79.7 78 48.7
MSTRG.2708 Avicennia marina HOM05D006394 ORTHO05D008057 2.4e-13 79.3 85 48.2
Eucgr.J02427 Eucalyptus grandis HOM05D006394 ORTHO05D008057 2.4e-13 79.3 78 52.6
Prupe.7G167400 Prunus persica HOM05D006394 ORTHO05D008057 2.4e-13 79.3 78 52.6
Gohir.A11G175800 Gossypium hirsutum HOM05D006394 ORTHO05D008057 6.9e-13 77.8 78 53.8
MD15G1246300 Malus domestica HOM05D006394 ORTHO05D008057 9.0e-13 77.4 78 53.8
Glyma.02G048900 Glycine max HOM05D006394 ORTHO05D008057 1.2e-12 77.0 72 48.6
TWI53G2075 Tripterygium wilfordii HOM05D006394 ORTHO05D008057 1.2e-12 77.0 87 47.1
Gohir.D11G183600 Gossypium hirsutum HOM05D006394 ORTHO05D008057 1.5e-12 76.6 78 52.6
Gorai.007G195500 Gossypium raimondii HOM05D006394 ORTHO05D008057 1.5e-12 76.6 78 52.6
Actinidia22984 Actinidia chinensis HOM05D006394 ORTHO05D008057 2.6e-12 75.9 76 53.9
MD02G1133300 Malus domestica HOM05D006394 ORTHO05D008057 4.4e-12 75.1 70 52.9
arahy.Tifrunner.gnm1.ann1.SHNU8N Arachis hypogaea HOM05D006394 ORTHO05D008057 1.7e-11 73.2 73 49.3
arahy.Tifrunner.gnm1.ann1.VDMC0V Arachis hypogaea HOM05D006394 ORTHO05D008057 1.7e-11 73.2 73 49.3
SGA_v2.0_scaffold137G35082 Striga asiatica HOM05D006394 ORTHO05D008057 2.9e-11 72.4 80 43.8
Actinidia28701 Actinidia chinensis HOM05D006394 ORTHO05D008057 4.9e-11 71.6 52 61.5
TPR.G30047 Trifolium pratense HOM05D006394 ORTHO05D008057 4.9e-11 71.6 72 45.8
Zm00001eb418470 Zea mays HOM05D006394 ORTHO05D008057 4.9e-11 71.6 71 49.3
Zm00001eb089410 Zea mays HOM05D006394 ORTHO05D008057 6.4e-11 71.2 71 49.3
Glyma.16G129000 Glycine max HOM05D006394 ORTHO05D008057 8.4e-11 70.9 78 47.4
DCAR_032392 Daucus carota HOM05D006394 ORTHO05D008057 1.1e-10 70.5 84 44.0
VMungo0251G2040 Vigna mungo HOM05D006394 ORTHO05D008057 1.4e-10 70.1 72 47.2
Lj4g0024758 Lotus japonicus HOM05D006394 ORTHO05D008057 3.2e-10 68.9 78 43.6
PGR102G2413 Punica granatum HOM05D006394 ORTHO05D008057 4.2e-10 68.6 78 46.2
Sc16g0002110 Simmondsia chinensis HOM05D006394 ORTHO05D008057 5.4e-10 68.2 70 48.6
Os04g0110600 Oryza sativa ssp. japonica HOM05D006394 ORTHO05D008057 1.2e-09 67.0 77 46.8
Zm00001eb411540 Zea mays HOM05D006394 ORTHO05D008057 1.2e-09 67.0 71 46.5
HPP92_007113 Vanilla planifolia HOM05D006394 ORTHO05D008057 1.6e-09 66.6 38 65.8
RcHm_v2.0_Chr2g0099531 Rosa chinensis HOM05D006394 ORTHO05D008057 2.7e-09 65.9 76 44.7
Phvul.003G262300 Phaseolus vulgaris HOM05D006394 ORTHO05D008057 3.5e-09 65.5 70 45.7
Aqoxy2G01815 Aquilegia oxysepala HOM05D006394 ORTHO05D008057 6.0e-09 64.7 79 41.8
Medtr8g075970 Medicago truncatula HOM05D006394 ORTHO05D008057 6.0e-09 64.7 75 45.3
FvH4_1g11930 Fragaria vesca HOM05D006394 ORTHO05D008057 7.8e-09 64.3 72 45.8
Psat4g099000 Pisum sativum HOM05D006394 ORTHO05D008057 1.3e-08 63.5 73 45.2
Ca_22372_v3 Cicer arietinum L. HOM05D006394 ORTHO05D008057 2.3e-08 62.8 72 41.7
FAN28G2242 Fragaria x ananassa HOM05D006394 ORTHO05D008057 3.9e-08 62.0 78 46.2
CDE04G0153 Ceratophyllum demersum HOM05D006394 ORTHO05D008057 6.6e-08 61.2 79 38.0
FAN26G2471 Fragaria x ananassa HOM05D006394 ORTHO05D008057 6.6e-08 61.2 78 44.9
Lalb_Chr09g0333101 Lupinus albus HOM05D006394 ORTHO05D008057 6.6e-08 61.2 70 41.4
Hund16487 Selenicereus undatus HOM05D006394 ORTHO05D008057 6.6e-08 61.2 73 43.8
FAN19G0259 Fragaria x ananassa HOM05D006394 ORTHO05D008057 1.1e-07 60.5 72 44.4
Lsat_1_v5_gn_4_146641 Lactuca sativa HOM05D006394 ORTHO05D008057 1.1e-07 60.5 82 41.5
unitig_22.g6143 Utricularia gibba HOM05D006394 ORTHO05D008057 1.9e-07 59.7 80 41.2
FAN23G1778 Fragaria x ananassa HOM05D006394 ORTHO05D008057 1.6e-06 56.6 71 42.3
Sopen09g010860 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-06 56.2 30 90.0
THA.LOC104804261 Tarenaya hassleriana HOM05D006394 ORTHO05D008057 2.1e-06 56.2 26 80.8
Sopen00g002370 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen01g010970 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen01g011680 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen01g047890 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen01g049740 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen02g006210 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen02g012110 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen03g010390 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen03g024520 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen04g009250 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen04g009900 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen04g011990 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen04g018280 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen04g019520 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen04g020390 Solanum pennellii HOM05D000004 ORTHO05D000002 3.6e-06 55.5 29 93.1
Sopen05g007960 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen05g010120 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen05g022710 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen05g025680 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen06g009700 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen06g013210 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen07g008450 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen07g009610 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen07g012190 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen07g016330 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen07g017080 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen07g018530 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen07g019420 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen09g025290 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen10g007980 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen10g027840 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen11g019300 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen11g025050 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen12g017770 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen12g019950 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen12g024510 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 29 93.1
Sopen07g015810 Solanum pennellii HOM05D000002 ORTHO05D000001 4.8e-06 55.1 29 89.7
Sopen10g018450 Solanum pennellii HOM05D000002 ORTHO05D000001 4.8e-06 55.1 29 93.1
BolC7t40901H Brassica oleracea HOM05D006394 ORTHO05D008057 6.2e-06 54.7 39 59.0
Sopen11g022640 Solanum pennellii HOM05D000002 ORTHO05D000001 6.2e-06 54.7 29 89.7
Sopen08g005690 Solanum pennellii HOM05D000002 ORTHO05D000001 8.1e-06 54.3 38 76.3


User provided reference genes

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