Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g011010 Solanum pennellii HOM05D000047 ORTHO05D023162 6.1e-192 674.1 369 100.0
PGSC0003DMG400017015 Solanum tuberosum HOM05D000047 ORTHO05D023162 1.8e-79 300.4 257 60.7
Sopen04g011030 Solanum pennellii HOM05D000629 ORTHO05D023162 3.3e-68 263.1 301 52.2
Sopen09g007730 Solanum pennellii HOM05D008695 ORTHO05D001422 4.4e-65 252.7 254 57.1
Sopen05g010350 Solanum pennellii HOM05D000047 ORTHO05D000044 1.0e-61 241.5 411 40.9
Sopen11g022440 Solanum pennellii HOM05D000047 ORTHO05D000589 7.3e-60 235.3 536 34.5
Sopen04g011040 Solanum pennellii HOM05D000047 ORTHO05D000589 2.6e-57 226.9 288 47.9
Sopen03g009310 Solanum pennellii HOM05D000047 ORTHO05D000044 1.6e-51 207.6 536 31.2
Sopen03g008650 Solanum pennellii HOM05D000047 ORTHO05D000044 2.8e-51 206.8 114 89.5
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 2.8e-51 206.8 548 31.0
Sopen10g027690 Solanum pennellii HOM05D000047 ORTHO05D000044 3.6e-51 206.5 558 30.8
Sopen05g027320 Solanum pennellii HOM05D000047 ORTHO05D000044 4.0e-50 203.0 441 35.8
Sopen08g009730 Solanum pennellii HOM05D000047 ORTHO05D000044 2.2e-48 197.2 133 75.2
Sopen11g012550 Solanum pennellii HOM05D000047 ORTHO05D000589 7.8e-46 188.7 247 47.4
Solyc11g150138.1 Solanum lycopersicum HOM05D000047 ORTHO05D013907 2.1e-43 180.6 114 79.8
Sopen01g011940 Solanum pennellii HOM05D000047 ORTHO05D013907 4.8e-43 179.5 101 88.1
Sopen12g007840 Solanum pennellii HOM05D000047 ORTHO05D000044 5.3e-42 176.0 203 51.2
Sopen03g019140 Solanum pennellii HOM05D000047 ORTHO05D000044 6.9e-42 175.6 668 26.5
Sopen11g022480 Solanum pennellii HOM05D000047 ORTHO05D000589 3.2e-39 166.8 112 73.2
Sopen01g014300 Solanum pennellii HOM05D000047 ORTHO05D000589 3.0e-37 160.2 90 85.6
Sopen04g023920 Solanum pennellii HOM05D000047 ORTHO05D000044 5.6e-36 156.0 98 77.6
Sopen04g011260 Solanum pennellii HOM05D000047 ORTHO05D023162 1.6e-35 154.5 93 79.6
Sopen10g007040 Solanum pennellii HOM05D000047 ORTHO05D000589 1.7e-32 144.4 98 72.4
Sopen04g011270 Solanum pennellii HOM05D000047 ORTHO05D000044 6.0e-30 136.0 79 86.1
Sopen01g010900 Solanum pennellii HOM05D000047 ORTHO05D000589 7.9e-30 135.6 87 75.9
Sopen04g011230 Solanum pennellii HOM05D000014 ORTHO05D000589 7.9e-30 135.6 285 35.4
Sopen12g009330 Solanum pennellii HOM05D000047 ORTHO05D023162 7.4e-28 129.0 82 73.2
Sopen03g017200 Solanum pennellii HOM05D000047 ORTHO05D023162 1.3e-27 128.3 82 70.7
Sopen01g029360 Solanum pennellii HOM05D000047 ORTHO05D000589 1.4e-26 124.8 180 45.0
Sopen12g016880 Solanum pennellii HOM05D000047 ORTHO05D000589 1.8e-26 124.4 114 61.4
Sopen10g022130 Solanum pennellii HOM05D000047 ORTHO05D000589 5.1e-21 106.3 63 81.0
PGSC0003DMG400022101 Solanum tuberosum HOM05D008695 ORTHO05D001422 1.4e-18 98.2 55 87.3
Sopen04g012220 Solanum pennellii HOM05D000047 ORTHO05D000589 1.8e-18 97.8 68 69.1
Sopen03g009300 Solanum pennellii HOM05D004926 ORTHO05D013907 4.1e-18 96.7 55 87.3
Sopen05g011410 Solanum pennellii HOM05D004926 ORTHO05D013907 1.2e-17 95.1 55 85.5
Sopen10g027680 Solanum pennellii HOM05D004926 ORTHO05D013907 3.4e-17 93.6 54 87.0
Sopen01g029340 Solanum pennellii HOM05D000047 ORTHO05D000589 1.7e-16 91.3 147 40.1
PGSC0003DMG400014865 Solanum tuberosum HOM05D008695 ORTHO05D001422 1.7e-16 91.3 84 60.7
Sopen09g022070 Solanum pennellii HOM05D000047 ORTHO05D001422 6.5e-16 89.4 152 37.5
Sopen01g018150 Solanum pennellii HOM05D000047 ORTHO05D000589 5.5e-15 86.3 246 29.3
Sopen04g023930 Solanum pennellii HOM05D004926 ORTHO05D013907 6.1e-14 82.8 49 83.7
Sopen03g009570 Solanum pennellii HOM05D000047 ORTHO05D000589 3.0e-13 80.5 269 27.1
Sopen04g012230 Solanum pennellii HOM05D000047 ORTHO05D000589 3.0e-13 80.5 51 80.4
PGSC0003DMG400022100 Solanum tuberosum HOM05D000047 ORTHO05D000589 5.1e-13 79.7 51 80.4
Sopen01g017890 Solanum pennellii HOM05D000047 ORTHO05D000589 3.3e-12 77.0 130 40.8
Sopen01g025530 Solanum pennellii HOM05D000047 ORTHO05D000589 3.3e-12 77.0 84 52.4
Sopen05g022280 Solanum pennellii HOM05D000047 ORTHO05D000044 6.3e-11 72.8 103 43.7
Sopen08g011490 Solanum pennellii HOM05D000047 ORTHO05D000044 8.2e-11 72.4 103 43.7
Sopen02g008640 Solanum pennellii HOM05D000047 ORTHO05D000589 1.4e-10 71.6 103 43.7
Sopen05g022540 Solanum pennellii HOM05D000047 ORTHO05D000589 1.4e-10 71.6 103 44.7
Sopen12g017930 Solanum pennellii HOM05D000047 ORTHO05D000044 1.4e-10 71.6 103 43.7
Sopen05g023700 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-10 70.9 111 64.9
Sopen06g007460 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-10 70.9 111 64.9
Sopen07g017100 Solanum pennellii HOM05D000047 ORTHO05D000044 2.4e-10 70.9 76 50.0
Sopen01g027730 Solanum pennellii HOM05D000047 ORTHO05D000044 3.1e-10 70.5 103 43.7
Sopen03g015690 Solanum pennellii HOM05D008695 ORTHO05D001422 4.1e-10 70.1 145 35.9
Sopen09g018190 Solanum pennellii HOM05D000004 ORTHO05D000002 5.3e-10 69.7 111 64.9
Sopen10g021870 Solanum pennellii HOM05D000004 ORTHO05D000002 6.9e-10 69.3 111 64.0
Sopen04g019560 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-09 67.8 71 94.4
Sopen09g018240 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-09 67.8 71 94.4
Sopen04g020270 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-09 67.4 69 97.1
Sopen01g019750 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 94.2
Sopen01g029660 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 94.2
Sopen04g012700 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 95.7
Sopen04g021200 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 94.2
Sopen05g024690 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 94.2
Sopen07g018580 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 94.2
Sopen07g019640 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 94.2
Sopen09g011070 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 94.2
Sopen09g017510 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 95.7
Sopen09g019770 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 94.2
Sopen09g021320 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 94.2
Sopen09g023420 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 94.2
Sopen10g010070 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 94.2
Sopen10g016120 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 94.2
Sopen10g024390 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 94.2
Sopen11g008890 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 94.2
Sopen11g021420 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 94.2
Sopen11g023830 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 94.2
Sopen12g020140 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 95.7
Sopen12g020950 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 94.2
Sopen12g026070 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 67.0 69 94.2
Solyc05g045675.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 4.5e-09 66.6 53 60.4
Sopen01g010320 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-09 65.9 82 47.6
Nitab4.5_0000199g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-08 64.7 51 60.8
Nitab4.5_0000324g0260 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-08 64.7 51 60.8
Sopen01g018410 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-08 64.3 70 85.7
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 2.2e-08 64.3 135 33.3
Nitab4.5_0000462g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.8e-08 63.5 51 58.8
Nitab4.5_0001832g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.8e-08 63.5 51 58.8
Sopen09g009590 Solanum pennellii HOM05D000004 ORTHO05D000002 3.8e-08 63.5 111 55.0
Nitab4.5_0000017g0210 Nicotiana tabacum HOM05D004926 ORTHO05D001422 5.0e-08 63.2 71 50.7
Nitab4.5_0000587g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.5e-08 62.8 51 60.8
Nitab4.5_0001338g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.5e-08 62.4 51 58.8
Sopen01g010310 Solanum pennellii HOM05D000004 ORTHO05D000002 8.5e-08 62.4 81 67.9
Nitab4.5_0009741g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-07 62.0 107 39.3
Sopen02g001880 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-07 61.6 111 55.9
Nitab4.5_0000053g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.5e-07 60.8 107 37.4
Nitab4.5_0012379g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.5e-07 60.8 51 56.9
Sopen04g021180 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-07 60.5 71 80.3
Sopen01g013960 Solanum pennellii HOM05D008695 ORTHO05D001422 4.2e-07 60.1 53 54.7
Sopen05g017260 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-07 60.1 111 51.4
Sopen07g007240 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-07 60.1 71 80.3
Nitab4.5_0000643g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.5e-07 59.7 51 54.9
Sopen04g007930 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-07 59.7 111 54.1
Sopen06g010610 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-07 59.7 111 45.0
Sopen11g023330 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-07 59.7 111 55.0
Sopen12g011940 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-07 59.7 111 53.2
Sopen03g019590 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-07 59.3 71 78.9
Sopen03g027040 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-07 59.3 71 78.9
Sopen05g021910 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-07 59.3 71 77.5
Sopen09g009760 Solanum pennellii HOM05D000004 ORTHO05D010408 7.2e-07 59.3 71 76.1
Sopen11g011450 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-07 59.3 111 54.1
Sopen08g013020 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-06 58.5 111 42.3
Sopen12g021750 Solanum pennellii HOM05D000047 ORTHO05D000044 1.2e-06 58.5 53 54.7
Sopen01g006620 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-06 58.2 111 53.2
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 1.6e-06 58.2 53 56.6
Sopen07g009220 Solanum pennellii HOM05D008695 ORTHO05D001422 1.6e-06 58.2 53 56.6
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 1.6e-06 58.2 53 56.6
Sopen11g012330 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-06 58.2 71 77.5
Sopen11g017600 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-06 58.2 111 53.2
Sopen12g014230 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-06 58.2 111 53.2
Sopen12g015770 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-06 58.2 111 53.2
Sopen12g022280 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-06 58.2 111 53.2
Nitab4.5_0000157g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.1e-06 57.8 106 36.8
Sopen00g006950 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-06 57.8 111 52.3
Sopen01g006260 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-06 57.8 111 55.9
Sopen01g007140 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-06 57.8 71 77.5
Sopen03g011670 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-06 57.8 71 77.5
Sopen04g019010 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-06 57.8 71 69.0
Sopen05g012200 Solanum pennellii HOM05D000004 ORTHO05D000034 2.1e-06 57.8 70 75.7
Sopen06g008770 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-06 57.8 71 67.6
Sopen10g016090 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-06 57.8 71 77.5
Sopen10g016510 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-06 57.8 71 64.8
Sopen10g021960 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-06 57.8 71 74.6
Sopen02g001400 Solanum pennellii HOM05D001989 ORTHO05D002097 2.7e-06 57.4 69 82.6
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 2.7e-06 57.4 53 54.7
Sopen04g018760 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-06 57.4 111 46.8
Sopen05g016700 Solanum pennellii HOM05D000014 ORTHO05D000093 2.7e-06 57.4 71 77.5
Sopen09g017910 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-06 57.4 71 73.2
Sopen11g019450 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-06 57.4 111 53.2
Nitab4.5_0000775g0180 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.6e-06 57.0 51 52.9
Sopen04g018820 Solanum pennellii HOM05D000004 ORTHO05D000002 3.6e-06 57.0 71 63.4
Sopen05g021080 Solanum pennellii HOM05D000004 ORTHO05D000002 3.6e-06 57.0 109 40.4
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 3.6e-06 57.0 53 54.7
Sopen09g008160 Solanum pennellii HOM05D000004 ORTHO05D000002 3.6e-06 57.0 69 78.3
Sopen12g019860 Solanum pennellii HOM05D000004 ORTHO05D000002 3.6e-06 57.0 111 40.5
Nitab4.5_0003555g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.6e-06 56.6 51 54.9
Sopen01g012330 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-06 56.6 71 71.8
Sopen04g013010 Solanum pennellii HOM05D008695 ORTHO05D001422 4.6e-06 56.6 105 37.1
Sopen05g016600 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-06 56.6 111 51.4
Sopen07g018170 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-06 56.6 111 49.5
Sopen07g019010 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-06 56.6 71 73.2
Sopen08g008580 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-06 56.6 111 53.2
Sopen08g013120 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-06 56.6 111 46.8
Sopen09g018510 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-06 56.6 71 78.9
Sopen09g021660 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-06 56.6 111 49.5
Sopen09g022990 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-06 56.6 111 49.5
Sopen10g025780 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-06 56.6 111 53.2
Sopen11g012560 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-06 56.6 85 67.1
Sopen12g011930 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-06 56.6 111 54.1
Sopen12g019580 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-06 56.6 111 47.7
Sopen02g008890 Solanum pennellii HOM05D008695 ORTHO05D001422 6.1e-06 56.2 53 54.7
Sopen12g026180 Solanum pennellii HOM05D000004 ORTHO05D000002 6.1e-06 56.2 123 46.3
PGSC0003DMG400044937 Solanum tuberosum HOM05D009254 ORTHO05D012081 6.1e-06 56.2 60 50.0
Nitab4.5_0000073g0430 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.9e-06 55.8 51 52.9
Sopen06g005440 Solanum pennellii HOM05D000004 ORTHO05D000002 7.9e-06 55.8 71 62.0
Sopen12g009470 Solanum pennellii HOM05D000004 ORTHO05D000002 7.9e-06 55.8 111 44.1


User provided reference genes

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