Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g008890 Solanum pennellii HOM05D015646 ORTHO05D017131 5.5e-139 497.7 258 100.0
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 7.1e-62 241.5 194 66.5
Sopen06g013950 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-59 234.2 193 64.8
Sopen00g007260 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-57 227.3 188 66.0
Sopen06g013970 Solanum pennellii HOM05D000003 ORTHO05D000004 5.3e-57 225.3 191 66.0
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 6.5e-55 218.4 189 64.0
Sopen08g017350 Solanum pennellii HOM05D000047 ORTHO05D000589 1.1e-54 217.6 201 60.7
Sopen11g007870 Solanum pennellii HOM05D000155 ORTHO05D000007 3.2e-54 216.1 161 67.7
Sopen00g003400 Solanum pennellii HOM05D000024 ORTHO05D000007 5.1e-52 208.8 194 59.3
Sopen00g009370 Solanum pennellii HOM05D000024 ORTHO05D000006 1.5e-48 197.2 153 69.3
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 6.9e-41 171.8 153 64.1
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-39 167.2 210 50.0
Sopen08g013110 Solanum pennellii HOM05D000024 ORTHO05D000007 2.9e-39 166.4 191 51.3
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 4.6e-37 159.1 187 50.3
Sopen09g030960 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-32 144.4 175 50.3
PGSC0003DMG400047130 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.5e-27 127.5 88 68.2
PGSC0003DMG400044753 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.0e-23 114.8 208 37.0
Sopen10g026040 Solanum pennellii HOM05D000003 ORTHO05D000007 3.8e-23 112.8 97 70.1
PGSC0003DMG400043899 Solanum tuberosum HOM05D010285 ORTHO05D011400 3.8e-23 112.8 208 40.9
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-22 110.5 79 57.0
PGSC0003DMG400044928 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.8e-20 104.0 104 51.0
PGSC0003DMG400034636 Solanum tuberosum HOM05D000024 ORTHO05D000007 5.2e-20 102.4 199 39.2
Sopen09g020040 Solanum pennellii HOM05D015646 ORTHO05D017131 1.1e-19 101.3 66 75.8
PGSC0003DMG400036761 Solanum tuberosum HOM05D000024 ORTHO05D000007 2.0e-19 100.5 103 53.4
PGSC0003DMG400044364 Solanum tuberosum HOM05D010285 ORTHO05D000007 2.0e-19 100.5 155 45.2
PGSC0003DMG400034828 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.3e-19 99.8 88 55.7
PGSC0003DMG400036258 Solanum tuberosum HOM05D012066 ORTHO05D017133 4.4e-19 99.4 220 35.5
PGSC0003DMG400041338 Solanum tuberosum HOM05D000024 ORTHO05D000007 5.7e-19 99.0 188 36.7
PGSC0003DMG400041868 Solanum tuberosum HOM05D000024 ORTHO05D000007 7.5e-19 98.6 125 46.4
Sopen11g002790 Solanum pennellii HOM05D000024 ORTHO05D000007 9.7e-19 98.2 215 35.3
Sopen11g018190 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-18 97.8 192 37.5
Sopen07g013730 Solanum pennellii HOM05D000003 ORTHO05D000004 4.8e-18 95.9 212 32.1
Sopen09g015050 Solanum pennellii HOM05D000003 ORTHO05D000004 4.8e-18 95.9 120 40.8
PGSC0003DMG400043914 Solanum tuberosum HOM05D008663 ORTHO05D017125 1.1e-17 94.7 184 33.2
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 2.4e-17 93.6 226 31.0
Sopen04g015570 Solanum pennellii HOM05D000024 ORTHO05D000007 7.0e-17 92.0 199 32.2
Sopen02g009750 Solanum pennellii HOM05D000003 ORTHO05D026164 9.1e-17 91.7 70 55.7
Sopen11g007920 Solanum pennellii HOM05D015646 ORTHO05D017131 1.2e-16 91.3 66 74.2
Sopen10g026050 Solanum pennellii HOM05D015646 ORTHO05D017131 2.0e-16 90.5 64 75.0
Sopen03g013510 Solanum pennellii HOM05D000014 ORTHO05D000016 3.5e-16 89.7 187 40.1
PGSC0003DMG400034645 Solanum tuberosum HOM05D000024 ORTHO05D000007 3.5e-16 89.7 134 39.6
Sopen05g017810 Solanum pennellii HOM05D020245 ORTHO05D000007 3.8e-15 86.3 66 54.5
Sopen04g019580 Solanum pennellii HOM05D040192 ORTHO05D037681 5.0e-15 85.9 153 37.9
Sopen09g015020 Solanum pennellii HOM05D000024 ORTHO05D000007 1.6e-13 80.9 189 31.7
Sopen11g007960 Solanum pennellii HOM05D008562 ORTHO05D011465 1.6e-13 80.9 67 49.3
Sopen11g007970 Solanum pennellii HOM05D000014 ORTHO05D000016 2.7e-13 80.1 103 38.8
PGSC0003DMG400042088 Solanum tuberosum HOM05D000024 ORTHO05D011127 3.6e-13 79.7 172 38.4
Peaxi162Scf00700g00051 Petunia axillaris HOM05D000070 ORTHO05D002524 4.7e-13 79.3 192 32.8
Sopen05g020310 Solanum pennellii HOM05D008966 ORTHO05D011127 4.7e-13 79.3 114 36.8
Sopen01g015930 Solanum pennellii HOM05D015646 ORTHO05D017131 8.0e-13 78.6 61 60.7
PGSC0003DMG400038794 Solanum tuberosum HOM05D000024 ORTHO05D000007 4.0e-12 76.3 98 45.9
PGSC0003DMG400029909 Solanum tuberosum HOM05D000024 ORTHO05D000022 8.8e-12 75.1 143 35.0
Nitab4.5_0001349g0120 Nicotiana tabacum HOM05D013592 ORTHO05D049377 1.5e-11 74.3 107 35.5
PGSC0003DMG400046747 Solanum tuberosum HOM05D010285 ORTHO05D000007 2.0e-11 73.9 108 44.4
Sopen06g016720 Solanum pennellii HOM05D000024 ORTHO05D017131 3.4e-11 73.2 73 57.5
Sopen00g001110 Solanum pennellii HOM05D000003 ORTHO05D000007 4.4e-11 72.8 104 51.0
Sopen09g016340 Solanum pennellii HOM05D000004 ORTHO05D000002 9.8e-11 71.6 65 61.5
Sopen07g013630 Solanum pennellii HOM05D000003 ORTHO05D000007 1.7e-10 70.9 156 31.4
Sopen11g023270 Solanum pennellii HOM05D015646 ORTHO05D017131 1.7e-10 70.9 73 56.2
Nitab4.5_0000175g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.3e-10 68.6 119 36.1
Peaxi162Scf00709g00322 Petunia axillaris HOM05D000024 ORTHO05D000007 8.3e-10 68.6 53 45.3
Sopen07g013580 Solanum pennellii HOM05D000024 ORTHO05D000007 1.1e-09 68.2 173 31.8
Sopen01g008290 Solanum pennellii HOM05D000047 ORTHO05D000589 2.4e-09 67.0 216 28.7
Sopen11g013390 Solanum pennellii HOM05D000024 ORTHO05D000007 2.4e-09 67.0 32 87.5
Nitab4.5_0003766g0030 Nicotiana tabacum HOM05D036785 ORTHO05D000007 9.1e-09 65.1 102 35.3
SHI45021 Sapria himalayana HOM05D000024 ORTHO05D000007 9.1e-09 65.1 72 43.1
Sopen09g028340 Solanum pennellii HOM05D000003 ORTHO05D000006 2.0e-08 63.9 162 34.0
Nitab4.5_0002286g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-08 63.5 96 34.4
Nitab4.5_0000096g0020 Nicotiana tabacum HOM05D011660 ORTHO05D000007 3.5e-08 63.2 111 33.3
SHI32392 Sapria himalayana HOM05D000024 ORTHO05D000007 3.5e-08 63.2 72 41.7
Sopen03g025350 Solanum pennellii HOM05D015646 ORTHO05D017131 3.5e-08 63.2 235 29.8
SHI45473 Sapria himalayana HOM05D000024 ORTHO05D000007 4.5e-08 62.8 66 43.9
Nitab4.5_0003024g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.9e-08 62.4 58 44.8
SHI30264 Sapria himalayana HOM05D000024 ORTHO05D000007 7.7e-08 62.0 81 42.0
CAN.G128.121 Capsicum annuum HOM05D001907 ORTHO05D015557 1.0e-07 61.6 127 35.4
SHI26243 Sapria himalayana HOM05D000024 ORTHO05D000007 1.3e-07 61.2 70 44.3
SHI37013 Sapria himalayana HOM05D000024 ORTHO05D000007 1.3e-07 61.2 93 35.5
Nitab4.5_0000195g0190 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-07 60.5 104 32.7
SHI17582 Sapria himalayana HOM05D000024 ORTHO05D000007 2.2e-07 60.5 69 44.9
SHI36804 Sapria himalayana HOM05D000024 ORTHO05D000007 2.2e-07 60.5 60 46.7
PGSC0003DMG400042385 Solanum tuberosum HOM05D000024 ORTHO05D000007 2.9e-07 60.1 184 31.0
SHI24141 Sapria himalayana HOM05D000024 ORTHO05D000007 3.8e-07 59.7 102 35.3
SHI24656 Sapria himalayana HOM05D000024 ORTHO05D000007 3.8e-07 59.7 72 40.3
Sopen01g019410 Solanum pennellii HOM05D000003 ORTHO05D000006 3.8e-07 59.7 40 57.5
SHI33955 Sapria himalayana HOM05D000024 ORTHO05D000007 5.0e-07 59.3 67 38.8
Sopen09g017040 Solanum pennellii HOM05D000003 ORTHO05D000004 5.0e-07 59.3 55 47.3
SHI22455 Sapria himalayana HOM05D000024 ORTHO05D000007 6.5e-07 58.9 74 40.5
SHI54658 Sapria himalayana HOM05D000024 ORTHO05D000007 6.5e-07 58.9 62 41.9
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.5e-07 58.5 102 36.3
Nitab4.5_0009190g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.5e-07 58.5 73 37.0
SHI21947 Sapria himalayana HOM05D000024 ORTHO05D000007 8.5e-07 58.5 72 38.9
SHI22040 Sapria himalayana HOM05D000024 ORTHO05D000007 8.5e-07 58.5 122 34.4
SHI30258 Sapria himalayana HOM05D000024 ORTHO05D000007 8.5e-07 58.5 72 38.9
SHI34315 Sapria himalayana HOM05D000024 ORTHO05D000007 8.5e-07 58.5 86 39.5
SHI01445 Sapria himalayana HOM05D000024 ORTHO05D000007 1.1e-06 58.2 70 41.4
SHI06596 Sapria himalayana HOM05D000024 ORTHO05D000007 1.1e-06 58.2 64 40.6
SHI37188 Sapria himalayana HOM05D000024 ORTHO05D000007 1.1e-06 58.2 72 43.1
SHI38102 Sapria himalayana HOM05D000024 ORTHO05D000007 1.1e-06 58.2 72 38.9
SHI48772 Sapria himalayana HOM05D000024 ORTHO05D000007 1.1e-06 58.2 72 38.9
Sopen09g012540 Solanum pennellii HOM05D015646 ORTHO05D017131 1.1e-06 58.2 275 28.7
Cc06_g23780 Coffea canephora HOM05D000024 ORTHO05D000007 1.5e-06 57.8 59 45.8
SHI01443 Sapria himalayana HOM05D000024 ORTHO05D000007 1.5e-06 57.8 80 37.5
SHI19646 Sapria himalayana HOM05D000024 ORTHO05D000007 1.5e-06 57.8 72 38.9
SHI24106 Sapria himalayana HOM05D000024 ORTHO05D000007 1.5e-06 57.8 72 38.9
SHI24339 Sapria himalayana HOM05D000024 ORTHO05D000007 1.5e-06 57.8 69 43.5
SHI32394 Sapria himalayana HOM05D000024 ORTHO05D000007 1.5e-06 57.8 69 40.6
SHI33638 Sapria himalayana HOM05D000024 ORTHO05D000007 1.5e-06 57.8 68 39.7
SHI54026 Sapria himalayana HOM05D000024 ORTHO05D000007 1.5e-06 57.8 72 40.3
Nitab4.5_0000227g0070 Nicotiana tabacum HOM05D011660 ORTHO05D000007 1.9e-06 57.4 83 37.3
Nitab4.5_0006025g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-06 57.4 135 31.9
Oeu002990.1 Olea europaea HOM05D000024 ORTHO05D000007 1.9e-06 57.4 61 41.0
Oeu038342.1 Olea europaea HOM05D000024 ORTHO05D000007 1.9e-06 57.4 61 41.0
SHI45439 Sapria himalayana HOM05D000024 ORTHO05D000007 1.9e-06 57.4 68 41.2
Sopen10g014780 Solanum pennellii HOM05D055428 ORTHO05D000007 1.9e-06 57.4 126 30.2
PGSC0003DMG400034467 Solanum tuberosum HOM05D000801 ORTHO05D000007 1.9e-06 57.4 75 41.3
Lj3P34T24 Lonicera japonica HOM05D000024 ORTHO05D000007 2.5e-06 57.0 56 41.1
SHI35408 Sapria himalayana HOM05D000024 ORTHO05D000007 3.2e-06 56.6 75 40.0
SHI53329 Sapria himalayana HOM05D000024 ORTHO05D000007 3.2e-06 56.6 72 38.9
SHI53380 Sapria himalayana HOM05D000024 ORTHO05D000007 3.2e-06 56.6 74 37.8
Lj7P35T9 Lonicera japonica HOM05D000024 ORTHO05D000007 4.2e-06 56.2 58 46.6
Oeu012200.1 Olea europaea HOM05D000024 ORTHO05D000007 4.2e-06 56.2 61 42.6
Oeu038497.1 Olea europaea HOM05D000024 ORTHO05D000007 4.2e-06 56.2 61 42.6
Oeu061495.1 Olea europaea HOM05D000024 ORTHO05D000007 4.2e-06 56.2 61 42.6
SHI06373 Sapria himalayana HOM05D000024 ORTHO05D000007 4.2e-06 56.2 72 37.5
SHI53604 Sapria himalayana HOM05D000024 ORTHO05D000006 4.2e-06 56.2 69 40.6
HPP92_008755 Vanilla planifolia HOM05D000024 ORTHO05D000007 4.2e-06 56.2 89 39.3
Lj7P279T28 Lonicera japonica HOM05D000024 ORTHO05D000007 5.5e-06 55.8 58 43.1
Oeu003309.1 Olea europaea HOM05D000024 ORTHO05D000007 5.5e-06 55.8 61 41.0
SHI26251 Sapria himalayana HOM05D000024 ORTHO05D000007 5.5e-06 55.8 71 38.0
SHI32673 Sapria himalayana HOM05D000024 ORTHO05D000007 5.5e-06 55.8 72 41.7
SHI49649 Sapria himalayana HOM05D000024 ORTHO05D000007 5.5e-06 55.8 72 38.9
SHI33956 Sapria himalayana HOM05D000024 ORTHO05D000007 7.2e-06 55.5 61 44.3
SHI54229 Sapria himalayana HOM05D000024 ORTHO05D000006 7.2e-06 55.5 72 38.9
PGSC0003DMG400014110 Solanum tuberosum HOM05D000044 ORTHO05D000007 7.2e-06 55.5 77 36.4
SHI27758 Sapria himalayana HOM05D000024 ORTHO05D000007 9.4e-06 55.1 69 40.6
SHI33946 Sapria himalayana HOM05D000024 ORTHO05D000007 9.4e-06 55.1 83 38.6
SHI33960 Sapria himalayana HOM05D000024 ORTHO05D000007 9.4e-06 55.1 74 43.2
SHI38236 Sapria himalayana HOM05D000024 ORTHO05D000007 9.4e-06 55.1 64 39.1
SHI54490 Sapria himalayana HOM05D000024 ORTHO05D000007 9.4e-06 55.1 72 38.9


User provided reference genes

Program Settings