Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g007370 Solanum pennellii HOM05D007651 ORTHO05D001192 1.1e-44 183.0 94 100.0
Solyc00g500096.1 Solanum lycopersicum HOM05D000390 ORTHO05D001192 3.5e-43 177.9 94 95.7
Solyc03g034455.1 Solanum lycopersicum HOM05D000390 ORTHO05D001192 7.8e-43 176.8 94 94.7
Sopen03g007340 Solanum pennellii HOM05D000390 ORTHO05D001192 3.6e-40 167.9 94 91.5
Sopen03g007330 Solanum pennellii HOM05D000390 ORTHO05D001192 9.0e-39 163.3 93 86.0
Solyc03g034450.4 Solanum lycopersicum HOM05D000390 ORTHO05D001192 1.5e-38 162.5 93 86.0
PGSC0003DMG402016693 Solanum tuberosum HOM05D007651 ORTHO05D001192 4.5e-38 161.0 94 85.1
PGSC0003DMG401016693 Solanum tuberosum HOM05D000390 ORTHO05D001192 5.8e-38 160.6 93 83.9
CAN.G11.17 Capsicum annuum HOM05D000390 ORTHO05D001192 1.5e-33 146.0 93 73.1
Peaxi162Scf00104g01920 Petunia axillaris HOM05D000390 ORTHO05D001192 1.2e-30 136.3 93 67.7
Nitab4.5_0000901g0120 Nicotiana tabacum HOM05D007651 ORTHO05D001192 1.5e-25 119.4 86 65.1
Nitab4.5_0000625g0020 Nicotiana tabacum HOM05D007651 ORTHO05D001192 3.3e-25 118.2 86 64.0
Oeu047424.1 Olea europaea HOM05D000390 ORTHO05D001192 6.5e-21 104.0 88 54.5
Oeu000897.1 Olea europaea HOM05D000390 ORTHO05D001192 1.6e-19 99.4 87 50.6
Oeu000896.1 Olea europaea HOM05D000390 ORTHO05D001192 5.1e-18 94.4 89 49.4
Actinidia17652 Actinidia chinensis HOM05D000390 ORTHO05D001192 4.3e-17 91.3 90 45.6
Solyc00g500091.1 Solanum lycopersicum HOM05D000390 ORTHO05D001192 1.3e-16 89.7 44 97.7
CSS0029078 Camellia sinensis var. sinensis HOM05D000390 ORTHO05D001192 6.9e-15 84.0 92 41.3
Actinidia36360 Actinidia chinensis HOM05D000390 ORTHO05D001192 2.6e-14 82.0 88 39.8
Dinv19002 Davidia involucrata HOM05D000390 ORTHO05D001192 3.4e-14 81.6 88 42.0
Actinidia15920 Actinidia chinensis HOM05D000390 ORTHO05D001192 5.9e-14 80.9 88 40.9
MSTRG.3531 Avicennia marina HOM05D000390 ORTHO05D001192 2.2e-13 79.0 88 43.2
vmacro05500 Vaccinium macrocarpon HOM05D000390 ORTHO05D001192 5.0e-13 77.8 90 40.0
SGA_v2.0_scaffold329G48863 Striga asiatica HOM05D000390 ORTHO05D001192 6.5e-13 77.4 88 38.6
Cc07_g08260 Coffea canephora HOM05D000390 ORTHO05D001192 1.4e-12 76.3 89 43.8
Hma1.2p1_0283F.1_g113590 Hydrangea macrophylla HOM05D000390 ORTHO05D001192 7.2e-12 73.9 88 35.2
MSTRG.23610 Avicennia marina HOM05D000390 ORTHO05D001192 2.1e-11 72.4 88 38.6
Rhsim10G0078700 Rhododendron simsii HOM05D000390 ORTHO05D001192 2.1e-11 72.4 82 35.4
vmacro05499 Vaccinium macrocarpon HOM05D000390 ORTHO05D001192 6.1e-11 70.9 90 35.6
Lsat_1_v5_gn_4_155121 Lactuca sativa HOM05D000390 ORTHO05D001192 7.9e-11 70.5 88 38.6
CSS0004503 Camellia sinensis var. sinensis HOM05D000390 ORTHO05D001192 1.0e-10 70.1 88 36.4
DCAR_025881 Daucus carota HOM05D000390 ORTHO05D001192 3.9e-10 68.2 86 37.2
vmacro05497 Vaccinium macrocarpon HOM05D000390 ORTHO05D001192 5.1e-10 67.8 84 35.7
QL02p048445 Quercus lobata HOM05D007651 ORTHO05D001192 6.7e-10 67.4 86 36.0
vmacro18054 Vaccinium macrocarpon HOM05D000390 ORTHO05D001192 6.7e-10 67.4 86 39.5
Migut.H00260 Erythranthe guttata HOM05D000390 ORTHO05D001192 1.1e-09 66.6 93 36.6
SGA_v2.0_scaffold147G36325 Striga asiatica HOM05D000390 ORTHO05D001192 1.5e-09 66.2 89 36.0
CANSAT01G2817 Cannabis sativa HOM05D007651 ORTHO05D001192 2.5e-09 65.5 86 36.0
DCAR_010733 Daucus carota HOM05D000390 ORTHO05D001192 4.3e-09 64.7 77 39.0
Glyma.10G201800 Glycine max HOM05D007651 ORTHO05D000898 5.7e-09 64.3 86 36.0
ECA232G3819 Erigeron canadensis HOM05D007651 ORTHO05D000898 9.7e-09 63.5 84 34.5
HanXRQChr11g0325241 Helianthus annuus HOM05D007651 ORTHO05D000898 9.7e-09 63.5 86 37.2
Lsat_1_v5_gn_4_155061 Lactuca sativa HOM05D007651 ORTHO05D000898 1.3e-08 63.2 86 33.7
Rhsim08G0085400 Rhododendron simsii HOM05D000390 ORTHO05D001192 1.3e-08 63.2 86 37.2
Hma1.2p1_1820F.1_g304200 Hydrangea macrophylla HOM05D007651 ORTHO05D001192 2.2e-08 62.4 86 38.4
TAR629G0648 Trochodendron aralioides HOM05D000390 ORTHO05D001192 2.2e-08 62.4 86 33.7
Actinidia17653 Actinidia chinensis HOM05D007651 ORTHO05D000898 2.8e-08 62.0 83 37.3
SGA_v2.0_scaffold147G36320 Striga asiatica HOM05D000390 ORTHO05D001192 4.8e-08 61.2 84 36.9
Lsat_1_v5_gn_2_81160 Lactuca sativa HOM05D000390 ORTHO05D001192 4.1e-07 58.2 72 38.9
Prupe.3G152100 Prunus persica HOM05D007651 ORTHO05D001192 4.1e-07 58.2 87 34.5
DCAR_025880 Daucus carota HOM05D000390 ORTHO05D001192 5.3e-07 57.8 86 33.7
FAN20G1844 Fragaria x ananassa HOM05D000390 ORTHO05D001192 5.3e-07 57.8 92 33.7
PSO478G2442 Papaver somniferum HOM05D000390 ORTHO05D001192 9.1e-07 57.0 86 33.7
Lsat_1_v5_gn_2_81300 Lactuca sativa HOM05D007651 ORTHO05D000898 1.2e-06 56.6 83 33.7
Rhsim08G0084700 Rhododendron simsii HOM05D000390 ORTHO05D001192 1.2e-06 56.6 91 37.4
DCAR_015249 Daucus carota HOM05D000390 ORTHO05D001192 1.5e-06 56.2 93 35.5
PSO017G0644 Papaver somniferum HOM05D000390 ORTHO05D001192 1.5e-06 56.2 86 32.6
Sed0008308 Sechium edule HOM05D000390 ORTHO05D001192 1.5e-06 56.2 88 30.7
Solyc03g043600.3 Solanum lycopersicum HOM05D007651 ORTHO05D000898 1.5e-06 56.2 86 33.7
ECA238G0783 Erigeron canadensis HOM05D007651 ORTHO05D000898 2.0e-06 55.8 86 32.6
MELO3C022842.2 Cucumis melo HOM05D000390 ORTHO05D001192 3.4e-06 55.1 86 30.2
Sopen03g007480 Solanum pennellii HOM05D007651 ORTHO05D000898 4.5e-06 54.7 86 33.7
Potri.004G072800 Populus trichocarpa HOM05D000390 ORTHO05D001192 5.9e-06 54.3 86 32.6


User provided reference genes

Program Settings