Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 1.9e-231 805.4 405 100.0
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 1.7e-227 792.3 405 98.3
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 4.6e-225 784.3 404 98.0
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 1.3e-187 659.8 359 93.3
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 3.0e-184 648.7 432 78.9
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 3.8e-171 605.1 399 78.2
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 6.8e-168 594.3 457 70.5
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 7.5e-159 564.3 420 71.2
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 9.2e-157 557.4 409 69.7
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 6.0e-156 554.7 410 69.0
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 2.5e-154 549.3 411 70.3
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 4.7e-153 545.0 412 68.2
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 5.8e-151 538.1 389 69.9
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 7.5e-151 537.7 414 67.1
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 1.3e-150 537.0 425 67.3
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 1.7e-150 536.6 413 67.3
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 2.2e-150 536.2 421 64.8
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 1.2e-148 530.4 406 66.3
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.6e-148 530.0 407 66.6
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.1e-146 523.9 394 66.8
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 2.5e-146 522.7 406 65.5
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 3.6e-145 518.8 417 63.8
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 6.2e-145 518.1 417 63.5
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 2.4e-144 516.2 416 65.6
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 8.9e-144 514.2 410 65.4
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 8.9e-144 514.2 410 63.9
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 4.4e-143 511.9 400 66.5
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 5.8e-143 511.5 410 64.1
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 7.6e-143 511.1 410 64.1
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 7.6e-143 511.1 410 64.1
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 7.6e-143 511.1 396 66.7
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 1.3e-142 510.4 412 63.6
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 2.2e-142 509.6 419 64.2
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 2.2e-142 509.6 412 63.6
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 2.9e-142 509.2 394 65.7
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 4.9e-142 508.4 395 66.6
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 8.4e-142 507.7 421 64.4
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 9.2e-141 504.2 392 65.8
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 8.7e-139 497.7 393 65.6
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 1.1e-138 497.3 392 65.1
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 1.9e-138 496.5 414 62.6
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 4.3e-138 495.4 391 66.2
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 5.6e-138 495.0 414 62.3
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 5.6e-138 495.0 395 64.3
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 2.1e-137 493.0 405 64.4
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 3.6e-137 492.3 411 62.3
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 4.7e-137 491.9 412 64.8
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 4.7e-137 491.9 403 63.3
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 4.0e-136 488.8 410 63.2
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 9.0e-136 487.6 392 64.8
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 2.0e-135 486.5 409 61.4
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 2.6e-135 486.1 399 63.4
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 4.4e-135 485.3 410 62.4
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 7.6e-135 484.6 394 62.9
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 2.1e-132 476.5 369 65.9
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 6.0e-132 474.9 390 63.6
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 2.3e-131 473.0 410 61.0
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 3.9e-131 472.2 410 61.5
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 3.9e-131 472.2 387 64.9
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 5.1e-131 471.9 425 60.0
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 6.6e-131 471.5 392 64.3
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 1.9e-130 469.9 410 60.2
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 7.3e-130 468.0 386 64.2
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 1.6e-129 466.8 427 58.5
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 8.1e-129 464.5 414 60.9
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 1.1e-128 464.2 405 60.2
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 5.3e-128 461.8 418 58.6
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 5.3e-128 461.8 410 59.8
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 1.2e-127 460.7 413 61.0
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 5.8e-127 458.4 391 59.8
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 5.8e-127 458.4 394 61.4
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.9e-127 457.6 337 69.1
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 1.9e-125 453.4 412 58.5
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 2.3e-123 446.4 416 57.9
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 5.1e-123 445.3 354 67.2
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 5.1e-123 445.3 415 58.3
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 2.5e-122 443.0 405 56.8
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 4.3e-122 442.2 397 60.7
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 1.4e-120 437.2 312 72.1
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 2.0e-119 433.3 342 66.1
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 2.2e-118 429.9 425 53.6
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 2.9e-118 429.5 388 58.5
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 4.2e-117 425.6 428 55.4
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.5e-114 417.2 390 54.9
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 3.3e-114 416.0 416 55.0
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.1e-109 401.0 394 53.6
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 1.1e-109 401.0 434 54.4
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 9.7e-106 387.9 363 60.3
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 2.2e-105 386.7 351 55.0
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 7.9e-100 368.2 362 55.5
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.7e-98 362.1 331 60.1
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 8.2e-97 358.2 467 42.6
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.2e-95 354.4 338 58.3
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.0e-95 353.6 340 57.9
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 5.0e-94 349.0 322 54.0
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.2e-93 346.3 298 62.1
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.1e-92 342.0 298 61.4
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.1e-92 342.0 298 61.4
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.1e-92 342.0 298 61.4
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 3.9e-91 339.3 395 45.3
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 2.6e-90 336.7 420 43.6
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 2.6e-82 310.1 293 58.0
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 3.7e-81 306.2 205 74.6
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 3.8e-78 296.2 286 57.3
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 6.5e-70 268.9 187 72.7
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 2.7e-68 263.5 245 57.6
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 3.6e-68 263.1 271 53.5
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 3.6e-52 209.9 354 37.6
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 5.4e-32 142.9 178 44.4
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 8.6e-30 135.6 80 78.8
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.2e-28 131.7 134 50.7
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 4.4e-26 123.2 207 37.2
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.5e-21 107.5 119 48.7
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 6.2e-20 102.8 158 34.8
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.5e-13 80.9 74 67.6
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.5e-13 80.9 74 67.6
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.5e-13 80.9 74 67.6
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 8.4e-09 65.9 59 57.6
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 7.1e-08 62.8 47 57.4
Haze_04836 Corylus avellana HOM05D006533 ORTHO05D008625 3.0e-06 57.4 60 56.7


User provided reference genes

Program Settings