Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 1.2e-287 993.0 743 100.0
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 7.6e-266 920.6 746 94.6
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 1.4e-232 810.1 751 81.0
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 2.2e-225 786.2 753 86.3
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 1.1e-208 730.7 752 78.1
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 9.8e-189 664.5 662 85.2
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 6.4e-172 608.6 555 98.0
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 3.7e-143 513.1 771 67.7
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 2.6e-141 506.9 754 57.4
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 3.4e-141 506.5 766 68.7
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 7.6e-141 505.4 680 62.4
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 2.2e-140 503.8 450 59.3
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 7.1e-139 498.8 680 62.2
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 6.9e-134 482.3 673 70.9
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 4.5e-133 479.6 675 72.1
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 2.2e-132 477.2 672 72.2
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 2.5e-128 463.8 679 71.3
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 2.5e-128 463.8 677 69.0
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 2.5e-128 463.8 439 66.5
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 9.7e-128 461.8 679 69.1
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 8.2e-127 458.8 448 64.7
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 8.2e-127 458.8 686 68.4
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 1.8e-126 457.6 448 64.5
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 2.4e-126 457.2 432 56.2
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 1.5e-125 454.5 677 72.4
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.5e-125 454.5 675 69.0
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 1.3e-124 451.4 759 63.6
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 1.7e-124 451.1 675 69.3
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 1.7e-124 451.1 457 61.1
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 2.2e-124 450.7 765 65.0
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 5.0e-124 449.5 761 63.3
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 5.0e-124 449.5 673 70.9
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 6.5e-124 449.1 703 69.8
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 1.1e-123 448.4 756 65.5
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 1.4e-123 448.0 631 73.1
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 3.2e-123 446.8 458 62.9
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 5.5e-123 446.0 361 72.9
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 7.2e-123 445.7 756 65.5
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 2.1e-122 444.1 440 63.2
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 3.6e-122 443.4 451 62.1
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 3.6e-122 443.4 429 65.0
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 2.3e-121 440.7 440 63.2
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 5.1e-121 439.5 362 73.2
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 1.5e-120 438.0 672 65.0
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 1.9e-120 437.6 426 60.6
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 4.3e-120 436.4 460 61.1
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 4.3e-120 436.4 672 65.0
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.3e-119 434.9 424 65.3
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 1.3e-119 434.9 440 63.9
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 2.2e-119 434.1 618 70.2
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 2.8e-119 433.7 401 68.3
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 6.3e-119 432.6 422 62.3
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 8.2e-119 432.2 756 56.1
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 3.1e-118 430.3 691 69.3
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 4.1e-118 429.9 431 63.1
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 9.1e-118 428.7 593 69.3
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.5e-117 427.9 424 64.9
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 2.0e-117 427.6 589 74.7
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 2.6e-117 427.2 370 69.5
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 3.4e-117 426.8 689 61.8
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 7.7e-117 425.6 385 69.4
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 1.3e-116 424.9 540 81.1
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 3.8e-116 423.3 676 46.0
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 3.8e-116 423.3 676 46.0
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 5.0e-116 422.9 504 56.3
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 2.5e-115 420.6 690 66.4
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 1.0e-113 415.2 634 70.0
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 1.8e-113 414.5 388 64.4
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 3.0e-113 413.7 382 68.1
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 3.9e-113 413.3 362 69.6
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 1.5e-112 411.4 467 59.3
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 2.0e-112 411.0 556 79.0
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 4.4e-112 409.8 424 62.7
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 5.7e-112 409.5 399 64.7
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 5.7e-112 409.5 536 54.1
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 3.7e-111 406.8 373 69.2
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 4.8e-111 406.4 339 73.2
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 1.1e-110 405.2 672 66.1
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 2.4e-110 404.1 399 65.2
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 4.1e-110 403.3 377 62.3
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 4.1e-110 403.3 632 69.9
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 5.3e-110 402.9 365 63.3
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 6.9e-110 402.5 590 73.7
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 1.5e-109 401.4 440 61.6
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 2.6e-109 400.6 607 72.5
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 5.0e-108 396.4 388 66.5
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 3.2e-107 393.7 368 66.0
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 5.5e-107 392.9 423 60.5
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 3.6e-106 390.2 378 63.0
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 1.4e-105 388.3 435 59.1
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 2.3e-105 387.5 330 70.3
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 2.4e-102 377.5 367 65.7
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 2.4e-102 377.5 367 65.7
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 1.6e-101 374.8 368 65.8
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 4.5e-101 373.2 368 65.2
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 5.9e-101 372.9 367 65.7
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 1.2e-98 365.2 510 50.6
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 2.1e-98 364.4 354 62.4
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.0e-97 362.1 437 57.4
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 4.0e-97 360.1 437 57.4
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 4.0e-97 360.1 377 61.3
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 1.1e-75 288.9 526 45.8
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 4.0e-73 280.4 200 66.5
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 5.8e-72 276.6 368 44.8
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 7.5e-64 249.6 212 59.4
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 9.5e-51 206.1 298 43.0
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 2.9e-47 194.5 366 39.3
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 3.9e-44 184.1 378 42.9
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 4.6e-37 160.6 384 40.4
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 6.9e-25 120.2 169 37.3
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 4.2e-22 110.9 141 45.4
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 3.5e-21 107.8 60 81.7
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 2.3e-20 105.1 216 50.0
SalBow1G4926 Salvia bowleyana HOM05D006844 ORTHO05D008504 1.6e-13 82.4 60 60.0


User provided reference genes

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