Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g034270 Solanum pennellii HOM05D000609 ORTHO05D000462 2.5e-45 185.3 107 100.0
Sopen03g011590 Solanum pennellii HOM05D000006 ORTHO05D000001 1.9e-29 132.5 101 69.3
Sopen12g029380 Solanum pennellii HOM05D000182 ORTHO05D000112 3.3e-29 131.7 82 80.5
Sopen04g024720 Solanum pennellii HOM05D000609 ORTHO05D000462 2.9e-25 118.6 98 78.6
Solyc04g054910.4 Solanum lycopersicum HOM05D000609 ORTHO05D000462 9.3e-24 113.6 98 76.5
Peaxi162Scf00422g00012 Petunia axillaris HOM05D000609 ORTHO05D000462 2.4e-19 99.0 101 63.4
PGSC0003DMG400020625 Solanum tuberosum HOM05D000609 ORTHO05D000462 4.5e-18 94.7 98 68.4
Cc07_g15390 Coffea canephora HOM05D000609 ORTHO05D000462 1.2e-15 86.7 78 57.7
Nitab4.5_0000601g0120 Nicotiana tabacum HOM05D000609 ORTHO05D000462 2.7e-15 85.5 67 73.1
Nitab4.5_0026202g0010 Nicotiana tabacum HOM05D000609 ORTHO05D000462 1.0e-14 83.6 67 65.7
CSS0008562 Camellia sinensis var. sinensis HOM05D000609 ORTHO05D000462 3.7e-12 75.1 76 55.3
Dinv21925 Davidia involucrata HOM05D000609 ORTHO05D000462 4.0e-11 71.6 67 56.7
Hma1.2p1_0011F.1_g007190 Hydrangea macrophylla HOM05D000609 ORTHO05D000462 5.8e-10 67.8 75 54.7
DCAR_014234 Daucus carota HOM05D000609 ORTHO05D000462 1.7e-09 66.2 38 76.3
TWI77G0327 Tripterygium wilfordii HOM05D000609 ORTHO05D000462 1.7e-09 66.2 74 48.6
Rhsim10G0159000 Rhododendron simsii HOM05D000609 ORTHO05D000462 2.2e-09 65.9 72 51.4
Oeu056591.2 Olea europaea HOM05D000609 ORTHO05D000462 3.8e-09 65.1 58 62.1
TAR381G1046 Trochodendron aralioides HOM05D000609 ORTHO05D000462 3.8e-09 65.1 72 45.8
MD15G1326800 Malus domestica HOM05D000609 ORTHO05D000462 4.9e-09 64.7 73 50.7
TAR625G0681 Trochodendron aralioides HOM05D000609 ORTHO05D000462 1.1e-08 63.5 72 44.4
Lj4P885T10 Lonicera japonica HOM05D000609 ORTHO05D000462 1.9e-08 62.8 38 73.7
Prupe.6G182200 Prunus persica HOM05D000609 ORTHO05D000462 1.9e-08 62.8 70 48.6
RcHm_v2.0_Chr2g0115041 Rosa chinensis HOM05D000609 ORTHO05D000462 1.9e-08 62.8 78 48.7
MSTRG.3792 Avicennia marina HOM05D000609 ORTHO05D000462 4.2e-08 61.6 65 50.8
Duzib264G1009 Durio zibethinus HOM05D000609 ORTHO05D000462 7.1e-08 60.8 94 41.5
Oeu051802.2 Olea europaea HOM05D000609 ORTHO05D000462 7.1e-08 60.8 39 71.8
SalBow3G1419 Salvia bowleyana HOM05D000609 ORTHO05D000462 7.1e-08 60.8 66 45.5
TWI74G1093 Tripterygium wilfordii HOM05D000609 ORTHO05D000462 7.1e-08 60.8 79 44.3
FAN28G0095 Fragaria x ananassa HOM05D000609 ORTHO05D000462 9.3e-08 60.5 78 47.4
COL.COLO4_09940 Corchorus olitorius HOM05D000609 ORTHO05D000462 1.2e-07 60.1 68 44.1
Oeu051803.1 Olea europaea HOM05D000609 ORTHO05D000462 1.6e-07 59.7 73 49.3
SGA_v2.0_scaffold47G17763 Striga asiatica HOM05D000609 ORTHO05D000462 1.6e-07 59.7 38 73.7
TAR376G0265 Trochodendron aralioides HOM05D000609 ORTHO05D000462 2.7e-07 58.9 72 43.1
Duzib147G1624 Durio zibethinus HOM05D000609 ORTHO05D000462 3.5e-07 58.5 98 37.8
Migut.L00108 Erythranthe guttata HOM05D000609 ORTHO05D000462 3.5e-07 58.5 60 53.3
FAN23G0016 Fragaria x ananassa HOM05D000609 ORTHO05D000462 3.5e-07 58.5 70 47.1
Manes.12G136800 Manihot esculenta HOM05D000609 ORTHO05D000462 3.5e-07 58.5 40 72.5
CiPaw.03G140400 Carya illinoinensis HOM05D000609 ORTHO05D000462 4.6e-07 58.2 39 76.9
Haze_24955 Corylus avellana HOM05D000609 ORTHO05D000462 4.6e-07 58.2 76 44.7
Cfa002684 Carpinus fangiana HOM05D000609 ORTHO05D000462 6.0e-07 57.8 82 42.7
CiPaw.04G097700 Carya illinoinensis HOM05D000609 ORTHO05D000462 6.0e-07 57.8 39 74.4
Glyma.05G179900 Glycine max HOM05D000609 ORTHO05D000462 6.0e-07 57.8 75 46.7
FAN26G2713 Fragaria x ananassa HOM05D000609 ORTHO05D000462 7.9e-07 57.4 77 46.8
DCAR_011508 Daucus carota HOM05D000609 ORTHO05D000462 1.0e-06 57.0 38 65.8
FAN19G2666 Fragaria x ananassa HOM05D000609 ORTHO05D000462 1.0e-06 57.0 81 42.0
Oeu045794.1 Olea europaea HOM05D000609 ORTHO05D000462 1.3e-06 56.6 58 56.9
MSTRG.2559 Avicennia marina HOM05D000609 ORTHO05D000462 1.8e-06 56.2 81 45.7
Duzib187G0777 Durio zibethinus HOM05D000609 ORTHO05D000462 1.8e-06 56.2 37 64.9
Duzib187G1519 Durio zibethinus HOM05D000609 ORTHO05D000462 1.8e-06 56.2 37 64.9
FvH4_1g21210 Fragaria vesca HOM05D000609 ORTHO05D000462 1.8e-06 56.2 81 42.0
Gohir.A11G200600 Gossypium hirsutum HOM05D000609 ORTHO05D000462 1.8e-06 56.2 38 65.8
Gorai.007G240700 Gossypium raimondii HOM05D000609 ORTHO05D000462 1.8e-06 56.2 38 65.8
TPR.G2163 Trifolium pratense HOM05D000609 ORTHO05D000462 1.8e-06 56.2 40 72.5
Gohir.A12G079100 Gossypium hirsutum HOM05D000609 ORTHO05D000462 2.3e-06 55.8 105 39.0
Phvul.009G029600 Phaseolus vulgaris HOM05D000609 ORTHO05D000462 2.3e-06 55.8 73 43.8
TAR628G1355 Trochodendron aralioides HOM05D000609 ORTHO05D000462 2.3e-06 55.8 72 40.3
CANSAT01G1505 Cannabis sativa HOM05D000609 ORTHO05D000462 3.0e-06 55.5 40 67.5
Ca_17727_v3 Cicer arietinum L. HOM05D000609 ORTHO05D000462 3.0e-06 55.5 40 70.0
Manes.13G093300 Manihot esculenta HOM05D000609 ORTHO05D000462 3.0e-06 55.5 97 40.2
Glyma.08G137600 Glycine max HOM05D000609 ORTHO05D000462 5.1e-06 54.7 72 45.8
MBI02_g36656_MAGBIO Magnolia biondii HOM05D000609 ORTHO05D000462 5.1e-06 54.7 38 60.5
Psat7g053920 Pisum sativum HOM05D000609 ORTHO05D000462 5.1e-06 54.7 40 70.0
Lj4g0018450 Lotus japonicus HOM05D000609 ORTHO05D000462 6.7e-06 54.3 40 67.5
Medtr8g090350 Medicago truncatula HOM05D000609 ORTHO05D000462 6.7e-06 54.3 40 70.0
Eucgr.I00422 Eucalyptus grandis HOM05D000609 ORTHO05D000462 8.7e-06 53.9 101 37.6
THA.LOC104804157 Tarenaya hassleriana HOM05D000609 ORTHO05D000462 8.7e-06 53.9 38 65.8


User provided reference genes

Program Settings