Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g027370 Solanum pennellii HOM05D004017 ORTHO05D004612 1.6e-51 205.7 98 100.0
CAN.G1238.14 Capsicum annuum HOM05D004017 ORTHO05D004612 5.9e-25 117.5 89 65.2
Sopen02g027400 Solanum pennellii HOM05D004017 ORTHO05D004612 1.3e-24 116.3 86 68.6
Solyc02g082660.3 Solanum lycopersicum HOM05D004017 ORTHO05D004612 8.5e-24 113.6 88 68.2
Peaxi162Scf00121g02447 Petunia axillaris HOM05D004017 ORTHO05D004612 6.1e-22 107.5 76 65.8
Solyc01g110640.2 Solanum lycopersicum HOM05D004017 ORTHO05D013629 1.0e-21 106.7 87 65.5
Nitab4.5_0001467g0030 Nicotiana tabacum HOM05D004017 ORTHO05D004612 1.8e-21 105.9 96 56.2
PGSC0003DMG401018040 Solanum tuberosum HOM05D004017 ORTHO05D004612 8.2e-19 97.1 62 72.6
Sopen01g052810 Solanum pennellii HOM05D004017 ORTHO05D004612 1.6e-17 92.8 62 74.2
Sopen02g033710 Solanum pennellii HOM05D004017 ORTHO05D004612 1.6e-17 92.8 69 66.7
Nitab4.5_0004608g0030 Nicotiana tabacum HOM05D004017 ORTHO05D004612 3.8e-16 88.2 62 66.1
Sopen02g033750 Solanum pennellii HOM05D004017 ORTHO05D004612 1.1e-15 86.7 65 66.2
Sopen01g045030 Solanum pennellii HOM05D004017 ORTHO05D004612 5.5e-15 84.3 51 76.5
Dinv28321 Davidia involucrata HOM05D004017 ORTHO05D004612 4.7e-14 81.3 76 48.7
GSVIVG01026635001 Vitis vinifera HOM05D004017 ORTHO05D004612 6.1e-14 80.9 81 44.4
Solyc01g102630.4 Solanum lycopersicum HOM05D004017 ORTHO05D004612 1.4e-13 79.7 50 74.0
Glyma.01G158400 Glycine max HOM05D004017 ORTHO05D004612 1.8e-13 79.3 82 42.7
CiPaw.07G002300 Carya illinoinensis HOM05D004017 ORTHO05D004612 5.2e-13 77.8 85 44.7
vmacro20628 Vaccinium macrocarpon HOM05D004017 ORTHO05D004612 6.8e-13 77.4 72 50.0
Actinidia22894 Actinidia chinensis HOM05D004017 ORTHO05D004612 1.3e-11 73.2 77 48.1
Ciclev10024702m.g Citrus clementina HOM05D004017 ORTHO05D004612 1.3e-11 73.2 69 44.9
Manes.02G114300 Manihot esculenta HOM05D004017 ORTHO05D004612 1.3e-11 73.2 66 50.0
Phvul.002G116900 Phaseolus vulgaris HOM05D004017 ORTHO05D004612 2.8e-11 72.0 82 40.2
Cc07_g11910 Coffea canephora HOM05D004017 ORTHO05D004612 3.7e-11 71.6 71 45.1
Duzib147G1448 Durio zibethinus HOM05D004017 ORTHO05D004612 6.3e-11 70.9 70 45.7
Prupe.7G183500 Prunus persica HOM05D004017 ORTHO05D004612 6.3e-11 70.9 97 37.1
Rhsim10G0195200 Rhododendron simsii HOM05D004017 ORTHO05D004612 1.1e-10 70.1 72 50.0
arahy.Tifrunner.gnm1.ann1.IMTK78 Arachis hypogaea HOM05D004017 ORTHO05D004612 1.8e-10 69.3 71 43.7
TWI09G1144 Tripterygium wilfordii HOM05D004017 ORTHO05D004612 1.8e-10 69.3 81 39.5
Ca_24985_v3 Cicer arietinum L. HOM05D004017 ORTHO05D004612 3.1e-10 68.6 76 40.8
Lj2g0020546 Lotus japonicus HOM05D004017 ORTHO05D004612 3.1e-10 68.6 66 45.5
TPR.G33889 Trifolium pratense HOM05D004017 ORTHO05D004612 3.1e-10 68.6 83 39.8
Nn6g31689 Nelumbo nucifera HOM05D004017 ORTHO05D004612 4.1e-10 68.2 85 35.3
Sabra05G0084300 Salix brachista HOM05D004017 ORTHO05D004612 4.1e-10 68.2 80 38.8
Hma1.2p1_0300F.1_g117960 Hydrangea macrophylla HOM05D004017 ORTHO05D004612 5.4e-10 67.8 86 38.4
Lalb_Chr16g0380061 Lupinus albus HOM05D004017 ORTHO05D004612 5.4e-10 67.8 76 38.2
Thecc.01G005000 Theobroma cacao HOM05D004017 ORTHO05D004612 5.4e-10 67.8 70 47.1
VMungo1215G1547 Vigna mungo HOM05D004017 ORTHO05D004612 5.4e-10 67.8 82 40.2
Eucgr.J02538 Eucalyptus grandis HOM05D004017 ORTHO05D004612 9.1e-10 67.0 85 40.0
MD02G1114700 Malus domestica HOM05D004017 ORTHO05D004612 9.1e-10 67.0 76 39.5
CSS0016202 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 1.2e-09 66.6 50 62.0
CSS0016684 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 1.2e-09 66.6 50 62.0
CSS0024207 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 1.2e-09 66.6 50 62.0
CSS0032900 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 1.2e-09 66.6 50 62.0
CSS0018094 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 1.6e-09 66.2 50 62.0
Medtr5g024250 Medicago truncatula HOM05D004017 ORTHO05D004612 1.6e-09 66.2 76 39.5
Atru.chr3.129 Acer truncatum HOM05D004017 ORTHO05D004612 2.0e-09 65.9 66 42.4
CSS0016280 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 2.7e-09 65.5 50 62.0
CANSAT25G1082 Cannabis sativa HOM05D004017 ORTHO05D004612 3.5e-09 65.1 81 39.5
Lj2A500T36 Lonicera japonica HOM05D004017 ORTHO05D004612 3.5e-09 65.1 82 42.7
Potri.005G101900 Populus trichocarpa HOM05D004017 ORTHO05D004612 3.5e-09 65.1 80 37.5
CSS0002700 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 4.5e-09 64.7 50 60.0
CSS0017200 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 4.5e-09 64.7 50 60.0
QL06p053019 Quercus lobata HOM05D004017 ORTHO05D004612 4.5e-09 64.7 71 39.4
Psat2g148040 Pisum sativum HOM05D004017 ORTHO05D004612 1.0e-08 63.5 66 42.4
RcHm_v2.0_Chr2g0097091 Rosa chinensis HOM05D004017 ORTHO05D004612 1.3e-08 63.2 71 38.0
FAN26G0543 Fragaria x ananassa HOM05D004017 ORTHO05D004612 2.2e-08 62.4 76 36.8
FvH4_1g10270 Fragaria vesca HOM05D004017 ORTHO05D004612 3.8e-08 61.6 76 36.8
FAN19G1215 Fragaria x ananassa HOM05D004017 ORTHO05D004612 3.8e-08 61.6 76 36.8
FAN28G2227 Fragaria x ananassa HOM05D004017 ORTHO05D004612 3.8e-08 61.6 76 36.8
HanXRQChr14g0442551 Helianthus annuus HOM05D004017 ORTHO05D004612 6.5e-08 60.8 71 40.8
Aqoxy6G01621 Aquilegia oxysepala HOM05D004017 ORTHO05D004612 8.5e-08 60.5 72 43.1
DCAR_016694 Daucus carota HOM05D004017 ORTHO05D004612 8.5e-08 60.5 70 42.9
Oeu045735.2 Olea europaea HOM05D004017 ORTHO05D004612 8.5e-08 60.5 69 44.9
PGR142G4352 Punica granatum HOM05D004017 ORTHO05D004612 8.5e-08 60.5 76 40.8
TAR628G0231 Trochodendron aralioides HOM05D004017 ORTHO05D004612 1.5e-07 59.7 78 41.0
FAN23G1226 Fragaria x ananassa HOM05D004017 ORTHO05D004612 3.2e-07 58.5 76 35.5
PSO541G0703 Papaver somniferum HOM05D004017 ORTHO05D004612 3.2e-07 58.5 89 34.8
Hund03598 Selenicereus undatus HOM05D004017 ORTHO05D004612 3.2e-07 58.5 76 43.4
ECA238G2486 Erigeron canadensis HOM05D004017 ORTHO05D004612 4.2e-07 58.2 71 38.0
Gohir.A02G178100 Gossypium hirsutum HOM05D004017 ORTHO05D004612 1.2e-06 56.6 71 45.1
Gorai.003G002000 Gossypium raimondii HOM05D004017 ORTHO05D004612 1.2e-06 56.6 71 45.1
Solyc01g150174.1 Solanum lycopersicum HOM05D043770 ORTHO05D018125 1.2e-06 56.6 43 62.8
CsaV3_3G000200 Cucumis sativus L. HOM05D004017 ORTHO05D004612 2.1e-06 55.8 67 40.3
MELO3C013715.2 Cucumis melo HOM05D004017 ORTHO05D004612 6.1e-06 54.3 67 38.8
THA.LOC104819715 Tarenaya hassleriana HOM05D004017 ORTHO05D004612 6.1e-06 54.3 69 42.0
Lsat_1_v5_gn_2_73681 Lactuca sativa HOM05D004017 ORTHO05D004612 8.0e-06 53.9 73 41.1


User provided reference genes

Program Settings