Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g027100 Solanum pennellii HOM05D004017 ORTHO05D051262 6.3e-39 163.7 86 100.0
Nitab4.5_0001467g0030 Nicotiana tabacum HOM05D004017 ORTHO05D004612 1.4e-09 66.2 37 81.1
CAN.G1238.14 Capsicum annuum HOM05D004017 ORTHO05D004612 3.0e-09 65.1 52 69.2
Peaxi162Scf00121g02447 Petunia axillaris HOM05D004017 ORTHO05D004612 6.8e-09 63.9 44 75.0
Solyc01g150172.1 Solanum lycopersicum HOM05D011612 ORTHO05D013629 6.8e-09 63.9 58 69.0
Nitab4.5_0004608g0030 Nicotiana tabacum HOM05D004017 ORTHO05D004612 8.9e-09 63.5 37 78.4
Solyc02g082660.3 Solanum lycopersicum HOM05D004017 ORTHO05D004612 3.4e-08 61.6 37 75.7
Sopen02g027400 Solanum pennellii HOM05D004017 ORTHO05D004612 5.7e-08 60.8 37 75.7
Solyc01g150174.1 Solanum lycopersicum HOM05D043770 ORTHO05D018125 9.8e-08 60.1 58 67.2
Solyc02g092525.1 Solanum lycopersicum HOM05D004017 ORTHO05D051262 9.8e-08 60.1 41 68.3
Thecc.01G005000 Theobroma cacao HOM05D004017 ORTHO05D004612 1.3e-07 59.7 37 75.7
Cpa.g.sc6.367 Carica papaya HOM05D004017 ORTHO05D004612 1.7e-07 59.3 37 73.0
CiPaw.07G002300 Carya illinoinensis HOM05D004017 ORTHO05D004612 1.7e-07 59.3 37 75.7
Ciclev10024702m.g Citrus clementina HOM05D004017 ORTHO05D004612 1.7e-07 59.3 45 68.9
Dinv28321 Davidia involucrata HOM05D004017 ORTHO05D004612 2.2e-07 58.9 44 68.2
Eucgr.J02538 Eucalyptus grandis HOM05D004017 ORTHO05D004612 2.2e-07 58.9 44 65.9
Glyma.01G158400 Glycine max HOM05D004017 ORTHO05D004612 2.2e-07 58.9 44 70.5
arahy.Tifrunner.gnm1.ann1.IMTK78 Arachis hypogaea HOM05D004017 ORTHO05D004612 2.8e-07 58.5 44 70.5
Ca_24985_v3 Cicer arietinum L. HOM05D004017 ORTHO05D004612 2.8e-07 58.5 44 68.2
QL06p053019 Quercus lobata HOM05D004017 ORTHO05D004612 2.8e-07 58.5 44 70.5
Sabra05G0084300 Salix brachista HOM05D004017 ORTHO05D004612 2.8e-07 58.5 37 70.3
Lalb_Chr16g0380061 Lupinus albus HOM05D004017 ORTHO05D004612 3.7e-07 58.2 44 70.5
GSVIVG01026635001 Vitis vinifera HOM05D004017 ORTHO05D004612 3.7e-07 58.2 44 70.5
Lj2g0020546 Lotus japonicus HOM05D004017 ORTHO05D004612 4.9e-07 57.8 44 68.2
Phvul.002G116900 Phaseolus vulgaris HOM05D004017 ORTHO05D004612 4.9e-07 57.8 44 68.2
Aqoxy6G01621 Aquilegia oxysepala HOM05D004017 ORTHO05D004612 6.3e-07 57.4 39 66.7
Manes.02G114300 Manihot esculenta HOM05D004017 ORTHO05D004612 6.3e-07 57.4 44 65.9
VMungo1215G1547 Vigna mungo HOM05D004017 ORTHO05D004612 6.3e-07 57.4 44 68.2
COL.COLO4_22554 Corchorus olitorius HOM05D004017 ORTHO05D004612 8.3e-07 57.0 44 68.2
Duzib147G1448 Durio zibethinus HOM05D004017 ORTHO05D004612 8.3e-07 57.0 37 70.3
TPR.G33889 Trifolium pratense HOM05D004017 ORTHO05D004612 8.3e-07 57.0 44 65.9
TWI09G1144 Tripterygium wilfordii HOM05D004017 ORTHO05D004612 8.3e-07 57.0 37 70.3
Cc07_g11910 Coffea canephora HOM05D004017 ORTHO05D004612 1.1e-06 56.6 44 70.5
MD02G1114700 Malus domestica HOM05D004017 ORTHO05D004612 1.1e-06 56.6 37 67.6
arahy.Tifrunner.gnm1.ann1.0EHY87 Arachis hypogaea HOM05D004017 ORTHO05D004612 1.4e-06 56.2 44 65.9
Nn6g31689 Nelumbo nucifera HOM05D004017 ORTHO05D004612 1.4e-06 56.2 37 70.3
Psat2g148040 Pisum sativum HOM05D004017 ORTHO05D004612 1.4e-06 56.2 37 67.6
Potri.005G101900 Populus trichocarpa HOM05D004017 ORTHO05D004612 1.4e-06 56.2 37 67.6
RcHm_v2.0_Chr2g0097091 Rosa chinensis HOM05D004017 ORTHO05D004612 1.4e-06 56.2 44 63.6
Atru.chr3.129 Acer truncatum HOM05D004017 ORTHO05D004612 1.8e-06 55.8 44 68.2
CsaV3_3G000200 Cucumis sativus L. HOM05D004017 ORTHO05D004612 1.8e-06 55.8 37 70.3
Gohir.A02G178100 Gossypium hirsutum HOM05D004017 ORTHO05D004612 1.8e-06 55.8 44 65.9
Medtr5g024250 Medicago truncatula HOM05D004017 ORTHO05D004612 1.8e-06 55.8 44 63.6
vmacro20628 Vaccinium macrocarpon HOM05D004017 ORTHO05D004612 1.8e-06 55.8 37 73.0
CANSAT25G1082 Cannabis sativa HOM05D004017 ORTHO05D004612 2.4e-06 55.5 37 62.2
FvH4_1g10270 Fragaria vesca HOM05D004017 ORTHO05D004612 2.4e-06 55.5 37 64.9
FAN19G1215 Fragaria x ananassa HOM05D004017 ORTHO05D004612 2.4e-06 55.5 37 64.9
FAN26G0543 Fragaria x ananassa HOM05D004017 ORTHO05D004612 2.4e-06 55.5 37 64.9
Hma1.2p1_0300F.1_g117960 Hydrangea macrophylla HOM05D004017 ORTHO05D004612 2.4e-06 55.5 44 63.6
Oeu045735.2 Olea europaea HOM05D004017 ORTHO05D004612 2.4e-06 55.5 37 70.3
Hund03598 Selenicereus undatus HOM05D004017 ORTHO05D004612 2.4e-06 55.5 34 76.5
THA.LOC104819715 Tarenaya hassleriana HOM05D004017 ORTHO05D004612 2.4e-06 55.5 44 68.2
MELO3C013715.2 Cucumis melo HOM05D004017 ORTHO05D004612 3.1e-06 55.1 37 67.6
FAN23G1226 Fragaria x ananassa HOM05D004017 ORTHO05D004612 4.1e-06 54.7 44 59.1
FAN28G2227 Fragaria x ananassa HOM05D004017 ORTHO05D004612 4.1e-06 54.7 44 59.1
Rhsim10G0195200 Rhododendron simsii HOM05D004017 ORTHO05D004612 4.1e-06 54.7 37 70.3
Sc03g0003980 Simmondsia chinensis HOM05D004017 ORTHO05D004612 4.1e-06 54.7 44 65.9
Actinidia22894 Actinidia chinensis HOM05D004017 ORTHO05D004612 5.4e-06 54.3 37 73.0
PSO541G0703 Papaver somniferum HOM05D004017 ORTHO05D004612 5.4e-06 54.3 52 51.9
TAR628G0231 Trochodendron aralioides HOM05D004017 ORTHO05D004612 5.4e-06 54.3 44 63.6
AUR62003744 Chenopodium quinoa HOM05D004017 ORTHO05D004612 7.0e-06 53.9 37 64.9
DCAR_016694 Daucus carota HOM05D004017 ORTHO05D004612 7.0e-06 53.9 44 59.1


User provided reference genes

Program Settings