Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g026170 Solanum pennellii HOM05D008226 ORTHO05D010321 5.8e-53 210.7 112 100.0
Solyc02g081540.2 Solanum lycopersicum HOM05D008226 ORTHO05D010321 3.2e-51 204.9 112 98.2
PGSC0003DMG400017740 Solanum tuberosum HOM05D008226 ORTHO05D010321 7.9e-50 200.3 110 96.4
CAN.G809.80 Capsicum annuum HOM05D008226 ORTHO05D010321 2.5e-40 168.7 110 83.6
Nitab4.5_0000108g0030 Nicotiana tabacum HOM05D008226 ORTHO05D010321 6.1e-34 147.5 114 73.7
Nitab4.5_0006392g0020 Nicotiana tabacum HOM05D008226 ORTHO05D010321 3.9e-33 144.8 113 73.5
Peaxi162Scf00344g00172 Petunia axillaris HOM05D008226 ORTHO05D010321 5.5e-27 124.4 115 66.1
QL02p055459 Quercus lobata HOM05D008226 ORTHO05D010321 2.5e-19 99.0 133 48.9
QL93p0228_0028 Quercus lobata HOM05D008226 ORTHO05D010321 2.5e-19 99.0 133 48.9
QL02p056502 Quercus lobata HOM05D008226 ORTHO05D010321 7.2e-19 97.4 135 48.1
Dinv19504 Davidia involucrata HOM05D008226 ORTHO05D010321 1.8e-17 92.8 117 51.3
Ciclev10013928m.g Citrus clementina HOM05D008226 ORTHO05D010321 3.7e-15 85.1 112 47.3
Hma1.2p1_0085F.1_g043950 Hydrangea macrophylla HOM05D008226 ORTHO05D010321 5.3e-14 81.3 127 44.1
Rhsim10G0187600 Rhododendron simsii HOM05D008226 ORTHO05D010321 9.1e-14 80.5 129 41.1
Eucgr.J00616 Eucalyptus grandis HOM05D008226 ORTHO05D010321 1.2e-13 80.1 114 48.2
Hund06853 Selenicereus undatus HOM05D008226 ORTHO05D010321 2.9e-12 75.5 126 41.3
EL10Ac1g01457 Beta vulgaris HOM05D008226 ORTHO05D010321 3.8e-12 75.1 113 43.4
EL10Ac4g08882 Beta vulgaris HOM05D008226 ORTHO05D010321 3.8e-12 75.1 113 43.4
PGR119G1943 Punica granatum HOM05D008226 ORTHO05D010321 1.9e-11 72.8 129 41.9
ClCG03G014230 Citrullus lanatus HOM05D008226 ORTHO05D010321 2.5e-11 72.4 131 43.5
Migut.K01185 Erythranthe guttata HOM05D008226 ORTHO05D010321 7.2e-11 70.9 118 47.5
vmacro20433 Vaccinium macrocarpon HOM05D008226 ORTHO05D010321 9.4e-11 70.5 130 39.2
AT5G36960 Arabidopsis thaliana HOM05D008226 ORTHO05D010321 1.2e-10 70.1 125 44.0
Carub.0007s3221 Capsella rubella HOM05D008226 ORTHO05D010321 1.2e-10 70.1 126 42.1
MBI06_g27514_MAGBIO Magnolia biondii HOM05D008226 ORTHO05D010321 2.7e-10 68.9 124 41.1
Sp7g05530 Schrenkiella parvula HOM05D008226 ORTHO05D010321 2.7e-10 68.9 127 40.9
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 3.6e-10 68.6 109 42.2
Cc07_g12530 Coffea canephora HOM05D008226 ORTHO05D010321 6.1e-10 67.8 124 43.5
Lalb_Chr18g0053921 Lupinus albus HOM05D008226 ORTHO05D010321 8.0e-10 67.4 136 37.5
Medtr3g063340 Medicago truncatula HOM05D008226 ORTHO05D010321 3.0e-09 65.5 134 35.1
CsaV3_1G042000 Cucumis sativus L. HOM05D008226 ORTHO05D010321 4.0e-09 65.1 126 40.5
Psat5g144560 Pisum sativum HOM05D008226 ORTHO05D010321 4.0e-09 65.1 131 35.9
MELO3C015616.2 Cucumis melo HOM05D008226 ORTHO05D010321 5.2e-09 64.7 123 39.0
Thhalv10027988m.g Eutrema salsugineum HOM05D008226 ORTHO05D010321 5.2e-09 64.7 124 40.3
Cpa.g.sc108.24 Carica papaya HOM05D008226 ORTHO05D010321 1.2e-08 63.5 109 37.6
THA.LOC104805671 Tarenaya hassleriana HOM05D008226 ORTHO05D010321 1.2e-08 63.5 115 41.7
Glyma.11G203200 Glycine max HOM05D008226 ORTHO05D010321 1.5e-08 63.2 135 36.3
CDE04G1260 Ceratophyllum demersum HOM05D008226 ORTHO05D010321 2.0e-08 62.8 112 42.0
BcaB06g27049 Brassica carinata HOM05D008226 ORTHO05D010321 2.6e-08 62.4 125 41.6
C04p43890 Brassica napus HOM05D008226 ORTHO05D010321 2.6e-08 62.4 125 41.6
BolC4t25969H Brassica oleracea HOM05D008226 ORTHO05D010321 2.6e-08 62.4 125 41.6
BcaC02g09537 Brassica carinata HOM05D008226 ORTHO05D010321 3.4e-08 62.0 125 41.6
Lj6g0027436 Lotus japonicus HOM05D008226 ORTHO05D010321 3.4e-08 62.0 139 33.8
A04p10380 Brassica napus HOM05D008226 ORTHO05D010321 4.4e-08 61.6 124 39.5
BraA04t16709Z Brassica rapa HOM05D008226 ORTHO05D010321 4.4e-08 61.6 124 39.5
AL7G45590 Arabidopsis lyrata HOM05D008226 ORTHO05D010321 7.5e-08 60.8 128 35.2
CSS0006272 Camellia sinensis var. sinensis HOM05D008226 ORTHO05D010321 7.5e-08 60.8 140 35.0
Glyma.18G047600 Glycine max HOM05D008226 ORTHO05D010321 1.7e-07 59.7 134 35.8
TWI34G0961 Tripterygium wilfordii HOM05D008226 ORTHO05D010321 2.2e-07 59.3 106 39.6
Aa31LG9G17730 Aethionema arabicum HOM05D008226 ORTHO05D010321 3.7e-07 58.5 123 39.0
TPR.G37332 Trifolium pratense HOM05D008226 ORTHO05D010321 3.7e-07 58.5 132 34.8
CANSAT78G1508 Cannabis sativa HOM05D008226 ORTHO05D010321 6.3e-07 57.8 119 35.3
CARHR216130 Cardamine hirsuta HOM05D008226 ORTHO05D010321 6.3e-07 57.8 129 37.2
Phvul.006G022000 Phaseolus vulgaris HOM05D008226 ORTHO05D010321 1.8e-06 56.2 134 35.8
THA.LOC104823832 Tarenaya hassleriana HOM05D008226 ORTHO05D010321 1.8e-06 56.2 118 39.0
Hma1.2p1_0085F.1_g043955 Hydrangea macrophylla HOM05D008226 ORTHO05D010321 4.1e-06 55.1 77 45.5
Hma1.2p1_0085F.1_g043980 Hydrangea macrophylla HOM05D008226 ORTHO05D010321 4.1e-06 55.1 77 45.5


User provided reference genes

Program Settings