Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g022170 Solanum pennellii HOM05D000345 ORTHO05D000215 3.6e-155 551.6 285 100.0
Sopen03g012280 Solanum pennellii HOM05D000345 ORTHO05D000215 3.0e-138 495.4 330 82.1
Solyc02g077250.2 Solanum lycopersicum HOM05D000345 ORTHO05D000215 1.5e-137 493.0 330 81.5
PGSC0003DMG400022964 Solanum tuberosum HOM05D000345 ORTHO05D000215 1.4e-127 459.9 335 77.0
Sopen04g017180 Solanum pennellii HOM05D000345 ORTHO05D000215 8.3e-104 380.9 277 76.5
Sopen12g015990 Solanum pennellii HOM05D000004 ORTHO05D000002 3.0e-101 372.5 274 75.9
CAN.G79.60 Capsicum annuum HOM05D000345 ORTHO05D000215 3.0e-93 345.9 376 55.9
Sopen01g007840 Solanum pennellii HOM05D000345 ORTHO05D000215 9.9e-89 330.9 254 74.0
Sopen06g007580 Solanum pennellii HOM05D000345 ORTHO05D000215 9.9e-89 330.9 254 74.0
Sopen07g025650 Solanum pennellii HOM05D000345 ORTHO05D000215 9.9e-89 330.9 254 74.0
Solyc05g012840.1 Solanum lycopersicum HOM05D000345 ORTHO05D000215 9.5e-84 314.3 222 75.2
Nitab4.5_0001645g0060 Nicotiana tabacum HOM05D000345 ORTHO05D000215 5.4e-71 271.9 375 50.4
Solyc05g032780.1 Solanum lycopersicum HOM05D000345 ORTHO05D000215 6.0e-70 268.5 203 73.9
Solyc11g045640.1 Solanum lycopersicum HOM05D000345 ORTHO05D000215 6.6e-69 265.0 203 74.4
Nitab4.5_0000376g0110 Nicotiana tabacum HOM05D000345 ORTHO05D000215 6.9e-66 255.0 379 50.7
Solyc10g018710.1 Solanum lycopersicum HOM05D000345 ORTHO05D000215 4.9e-56 222.2 162 71.0
Solyc01g016414.1 Solanum lycopersicum HOM05D000345 ORTHO05D000215 2.2e-43 180.3 151 71.5
Nitab4.5_0005897g0010 Nicotiana tabacum HOM05D000345 ORTHO05D000215 6.3e-35 152.1 378 37.8
Nitab4.5_0010549g0020 Nicotiana tabacum HOM05D000345 ORTHO05D000215 2.4e-34 150.2 358 37.7
Peaxi162Scf00269g00034 Petunia axillaris HOM05D000345 ORTHO05D000215 9.1e-34 148.3 444 33.6
Cc02_g14410 Coffea canephora HOM05D000345 ORTHO05D000215 4.2e-23 112.8 346 32.4
Oeu062332.1 Olea europaea HOM05D000345 ORTHO05D000215 1.5e-15 87.8 281 29.5
CAN.G168.1 Capsicum annuum HOM05D000345 ORTHO05D000215 1.2e-14 84.7 209 36.4
Oeu048420.1 Olea europaea HOM05D000345 ORTHO05D000215 2.0e-12 77.4 253 32.0
PGSC0003DMG400026626 Solanum tuberosum HOM05D000345 ORTHO05D000215 4.4e-12 76.3 194 37.6
Solyc10g008780.1 Solanum lycopersicum HOM05D000345 ORTHO05D000215 2.2e-11 73.9 180 38.9
MSTRG.7387 Avicennia marina HOM05D000345 ORTHO05D000215 3.7e-11 73.2 272 29.8
HanXRQChr12g0373501 Helianthus annuus HOM05D000345 ORTHO05D000215 1.4e-10 71.2 282 30.5
Sopen10g004550 Solanum pennellii HOM05D000345 ORTHO05D000215 2.4e-10 70.5 180 37.2
Oeu043094.1 Olea europaea HOM05D000345 ORTHO05D000215 4.1e-10 69.7 268 30.2
Lj1P1196T18 Lonicera japonica HOM05D000345 ORTHO05D000215 9.1e-10 68.6 305 26.6
Actinidia07627 Actinidia chinensis HOM05D000345 ORTHO05D000215 2.7e-09 67.0 254 26.8
Dinv17390 Davidia involucrata HOM05D000345 ORTHO05D000215 3.5e-09 66.6 299 27.1
DCAR_021280 Daucus carota HOM05D000345 ORTHO05D000215 1.0e-08 65.1 302 28.1
Nitab4.5_0003291g0010 Nicotiana tabacum HOM05D000345 ORTHO05D000215 1.0e-08 65.1 253 30.0
GSVIVG01021167001 Vitis vinifera HOM05D000345 ORTHO05D000215 1.3e-08 64.7 330 27.3
Cc05_g08060 Coffea canephora HOM05D000345 ORTHO05D000215 1.7e-08 64.3 294 26.5
Hma1.2p1_0002F.1_g002600 Hydrangea macrophylla HOM05D000345 ORTHO05D000215 1.7e-08 64.3 239 25.9
CDE02G2237 Ceratophyllum demersum HOM05D001447 ORTHO05D000215 2.9e-08 63.5 280 25.7
Dinv02390 Davidia involucrata HOM05D000345 ORTHO05D000215 5.0e-08 62.8 286 27.3
QL08p041169 Quercus lobata HOM05D000345 ORTHO05D000215 1.9e-07 60.8 140 30.0
SHI21555 Sapria himalayana HOM05D000345 ORTHO05D000215 2.5e-07 60.5 351 25.6
Actinidia39497 Actinidia chinensis HOM05D000345 ORTHO05D000215 3.2e-07 60.1 207 28.5
HanXRQChr10g0304701 Helianthus annuus HOM05D000345 ORTHO05D000215 5.5e-07 59.3 142 30.3
FvH4_3g18740 Fragaria vesca HOM05D000345 ORTHO05D000215 1.2e-06 58.2 93 37.6
FAN21G1184 Fragaria x ananassa HOM05D000345 ORTHO05D000215 1.2e-06 58.2 93 37.6
FAN11G1302 Fragaria x ananassa HOM05D000345 ORTHO05D000215 2.1e-06 57.4 93 37.6
Rhsim02G0139200 Rhododendron simsii HOM05D000345 ORTHO05D000215 2.1e-06 57.4 277 28.5
SalBow8G0709 Salvia bowleyana HOM05D000345 ORTHO05D000215 2.1e-06 57.4 302 23.8
SalBow8G5341 Salvia bowleyana HOM05D000345 ORTHO05D000215 2.1e-06 57.4 293 24.2
Glyma.06G232300 Glycine max HOM05D000345 ORTHO05D000215 3.6e-06 56.6 208 29.3
Lsat_1_v5_gn_9_99020 Lactuca sativa HOM05D000345 ORTHO05D000215 3.6e-06 56.6 90 35.6
BcaC09g48462 Brassica carinata HOM05D000345 ORTHO05D000215 4.7e-06 56.2 324 25.3
Prupe.3G124900 Prunus persica HOM05D000345 ORTHO05D000215 4.7e-06 56.2 175 29.7
FAN25G3709 Fragaria x ananassa HOM05D000345 ORTHO05D000215 6.1e-06 55.8 227 25.1
Lj1P834T10 Lonicera japonica HOM05D000345 ORTHO05D000215 6.1e-06 55.8 120 35.0
PSO675G7485 Papaver somniferum HOM05D000345 ORTHO05D000215 6.1e-06 55.8 127 35.4
Ah.01g003860 Amaranthus hybridus HOM05D000345 ORTHO05D000215 8.0e-06 55.5 195 28.2
BraA01t03936Z Brassica rapa HOM05D000345 ORTHO05D000215 8.0e-06 55.5 317 24.6
VMungo1127G1813 Vigna mungo HOM05D000345 ORTHO05D000215 8.0e-06 55.5 208 27.9


User provided reference genes

Program Settings