Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g046020 Solanum pennellii HOM05D000943 ORTHO05D024933 1.7e-73 279.3 140 100.0
Peaxi162Scf00011g01123 Petunia axillaris HOM05D000943 ORTHO05D010024 2.3e-51 205.7 135 76.3
Nitab4.5_0000787g0260 Nicotiana tabacum HOM05D000943 ORTHO05D010024 4.0e-51 204.9 136 75.7
Nitab4.5_0007295g0040 Nicotiana tabacum HOM05D000943 ORTHO05D010024 5.2e-51 204.5 136 75.7
CAN.G2125.2 Capsicum annuum HOM05D000943 ORTHO05D010024 8.9e-51 203.8 134 76.1
Sopen01g046030 Solanum pennellii HOM05D000943 ORTHO05D024933 3.5e-39 165.2 106 78.3
Nitab4.5_0000667g0060 Nicotiana tabacum HOM05D000943 ORTHO05D010024 7.6e-34 147.5 135 61.5
Peaxi162Scf02228g00005 Petunia axillaris HOM05D000943 ORTHO05D010024 1.1e-32 143.7 139 56.8
Atru.chr6.800 Acer truncatum HOM05D000943 ORTHO05D010024 1.4e-32 143.3 137 54.7
Hma1.2p1_2174F.1_g316050 Hydrangea macrophylla HOM05D000943 ORTHO05D010024 1.4e-32 143.3 135 54.8
CAN.G284.3 Capsicum annuum HOM05D000943 ORTHO05D010024 7.1e-32 141.0 141 58.2
Solyc10g038100.1 Solanum lycopersicum HOM05D000943 ORTHO05D024933 3.5e-31 138.7 139 58.3
vmacro19866 Vaccinium macrocarpon HOM05D000943 ORTHO05D010024 3.5e-31 138.7 135 56.3
Nitab4.5_0002550g0030 Nicotiana tabacum HOM05D000943 ORTHO05D010024 4.6e-31 138.3 136 57.4
Ciclev10001198m.g Citrus clementina HOM05D000943 ORTHO05D010024 2.3e-30 136.0 136 52.2
Rhsim04G0110500 Rhododendron simsii HOM05D000943 ORTHO05D010024 1.1e-29 133.7 135 54.8
SGA_v2.0_scaffold42G15906 Striga asiatica HOM05D000943 ORTHO05D010024 4.3e-29 131.7 144 50.7
CSS0044087 Camellia sinensis var. sinensis HOM05D000943 ORTHO05D010024 3.6e-28 128.6 135 53.3
Lj5A262G66 Lonicera japonica HOM05D000943 ORTHO05D010024 3.6e-28 128.6 134 53.0
Cc02_g23100 Coffea canephora HOM05D000943 ORTHO05D010024 1.4e-27 126.7 141 48.9
Manes.07G023600 Manihot esculenta HOM05D000943 ORTHO05D010024 6.9e-27 124.4 136 51.5
Thecc.02G019300 Theobroma cacao HOM05D000943 ORTHO05D010024 2.0e-26 122.9 135 51.9
Lsat_1_v5_gn_9_120381 Lactuca sativa HOM05D000943 ORTHO05D010024 4.5e-26 121.7 148 50.0
Duzib132G0520 Durio zibethinus HOM05D000943 ORTHO05D010024 5.8e-26 121.3 136 52.2
Gohir.D04G176600 Gossypium hirsutum HOM05D000943 ORTHO05D010024 7.6e-26 120.9 91 64.8
Dinv19403 Davidia involucrata HOM05D000943 ORTHO05D010024 9.9e-26 120.6 138 50.0
Gohir.A04G133500 Gossypium hirsutum HOM05D000943 ORTHO05D010024 2.2e-25 119.4 129 51.9
Manes.10G118900 Manihot esculenta HOM05D000943 ORTHO05D010024 2.2e-25 119.4 127 52.8
Gorai.012G169500 Gossypium raimondii HOM05D000943 ORTHO05D010024 2.9e-25 119.0 127 51.2
SalBow3G1699 Salvia bowleyana HOM05D000943 ORTHO05D010024 6.4e-25 117.9 134 48.5
Actinidia01604 Actinidia chinensis HOM05D000943 ORTHO05D010024 8.4e-25 117.5 138 50.0
Migut.N00828 Erythranthe guttata HOM05D000943 ORTHO05D010024 4.2e-24 115.2 141 46.8
PGR142G1561 Punica granatum HOM05D000943 ORTHO05D010024 5.5e-24 114.8 142 47.2
HanXRQChr01g0027191 Helianthus annuus HOM05D000943 ORTHO05D010024 1.6e-23 113.2 147 49.0
TAR628G1147 Trochodendron aralioides HOM05D000943 ORTHO05D010024 4.6e-23 111.7 135 44.4
Nn8g40352 Nelumbo nucifera HOM05D000943 ORTHO05D010024 1.0e-22 110.5 76 65.8
MBI09_g28076_MAGBIO Magnolia biondii HOM05D000943 ORTHO05D010024 1.8e-22 109.8 77 67.5
Prupe.1G578600 Prunus persica HOM05D000943 ORTHO05D010024 3.9e-22 108.6 128 50.0
Ah.02g128290 Amaranthus hybridus HOM05D000943 ORTHO05D010024 6.7e-22 107.8 144 45.8
EL10Ac4g08445 Beta vulgaris HOM05D000943 ORTHO05D010024 1.5e-21 106.7 144 45.8
CDE06G2531 Ceratophyllum demersum HOM05D000943 ORTHO05D024933 1.5e-21 106.7 100 54.0
Sed0011001 Sechium edule HOM05D000943 ORTHO05D010024 3.3e-21 105.5 104 56.7
ClCG10G007030 Citrullus lanatus HOM05D000943 ORTHO05D010024 7.4e-21 104.4 136 46.3
QL02p100337 Quercus lobata HOM05D000943 ORTHO05D010024 9.6e-21 104.0 91 57.1
Haze_10048 Corylus avellana HOM05D000943 ORTHO05D010024 1.3e-20 103.6 88 58.0
CsaV3_3G006360 Cucumis sativus L. HOM05D000943 ORTHO05D010024 1.6e-20 103.2 133 48.9
MELO3C016505.2 Cucumis melo HOM05D000943 ORTHO05D010024 2.1e-20 102.8 133 47.4
Oeu064607.2 Olea europaea HOM05D000943 ORTHO05D010024 2.8e-20 102.4 137 46.7
CsaV3_3G006370 Cucumis sativus L. HOM05D000943 ORTHO05D010024 2.4e-19 99.4 139 44.6
HPP92_011385 Vanilla planifolia HOM05D000943 ORTHO05D010024 2.4e-19 99.4 83 55.4
Potri.003G008700 Populus trichocarpa HOM05D000943 ORTHO05D010024 4.0e-19 98.6 90 56.7
Sabra03G0004300 Salix brachista HOM05D000943 ORTHO05D010024 6.9e-19 97.8 148 45.3
unitig_22.g6855 Utricularia gibba HOM05D000943 ORTHO05D010024 1.2e-18 97.1 136 45.6
ClCG10G007050 Citrullus lanatus HOM05D000943 ORTHO05D010024 1.5e-18 96.7 143 44.1
MELO3C016503.2 Cucumis melo HOM05D000943 ORTHO05D010024 2.6e-18 95.9 139 43.2
Hund15466 Selenicereus undatus HOM05D000943 ORTHO05D010024 2.6e-18 95.9 69 68.1
ATR0584G051 Amborella trichopoda HOM05D000943 ORTHO05D010024 5.8e-18 94.7 67 67.2
Cpa.g.sc113.50 Carica papaya HOM05D000943 ORTHO05D010024 1.7e-17 93.2 122 45.1
GSVIVG01023255001 Vitis vinifera HOM05D000943 ORTHO05D010024 6.5e-17 91.3 68 61.8
AagrBONN_evm.TU.Sc2ySwM_368.1065 Anthoceros agrestis HOM05D004447 ORTHO05D005973 8.4e-17 90.9 88 50.0
Cfa004493 Carpinus fangiana HOM05D000943 ORTHO05D010024 1.4e-16 90.1 171 39.8
DCAR_006674 Daucus carota HOM05D000943 ORTHO05D010024 1.6e-15 86.7 68 61.8
Pp3c7_7830 Physcomitrium patens HOM05D000943 ORTHO05D010024 1.3e-14 83.6 73 53.4
Os12g0170300 Oryza sativa ssp. japonica HOM05D000943 ORTHO05D010024 4.1e-11 72.0 65 53.8
SMO230G0059 Selaginella moellendorffii HOM05D000943 ORTHO05D010024 5.3e-11 71.6 69 47.8
Potri.017G069350 Populus trichocarpa HOM05D000943 ORTHO05D024933 3.0e-06 55.8 109 34.9


User provided reference genes

Program Settings