Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000943', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '636', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A03p29530' => 'bna', 'A03p53820' => 'bna', 'A04p29590' => 'bna', 'A05p07410' => 'bna', 'A07p06990' => 'bna', 'A07p43810' => 'bna', 'A09p27090' => 'bna', 'Aa31LG4G2400' => 'aar', 'Aa31LG4G2410' => 'aar', 'Aa31LG5G8880' => 'aar', 'Aa31LG6G4700' => 'aar', 'Aa31LG6G4910' => 'aar', 'Aa31LG9G10450' => 'aar', 'Aa31sc38G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2793' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2927' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.489' => 'aag', 'Actinidia01604' => 'ach', 'Actinidia02071' => 'ach', 'Actinidia03621' => 'ach', 'Actinidia09395' => 'ach', 'Actinidia14485' => 'ach', 'Actinidia23356' => 'ach', 'Actinidia30013' => 'ach', 'Ah.02g116300' => 'amhyb', 'Ah.02g128290' => 'amhyb', 'Ah.04g163940' => 'amhyb', 'Ah.09g227470' => 'amhyb', 'Ah.11g050980' => 'amhyb', 'AL2G38960' => 'aly', 'AL3G41280' => 'aly', 'AL4G20130' => 'aly', 'AL6G46830' => 'aly', 'AL7G30670' => 'aly', 'Aqoxy1G01881' => 'aox', 'Aqoxy5G00043' => 'aox', 'Aqoxy7G00587' => 'aox', 'Aqoxy7G01922' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1K7GD6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1RUKD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AQV2BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AVJ0IE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BUF90N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DI6VX2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P2VAYP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4LTZI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WT9QCD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X0ENSR' => 'arhy', 'AT1G78560' => 'ath', 'AT2G26900' => 'ath', 'AT3G25410' => 'ath', 'AT4G12030' => 'ath', 'AT4G22840' => 'ath', 'ATR0083G040' => 'atr', 'ATR0584G051' => 'atr', 'ATR0609G010' => 'atr', 'ATR0757G175' => 'atr', 'ATR0763G119' => 'atr', 'ATR0810G012' => 'atr', 'Atru.chr6.3542' => 'acertr', 'Atru.chr6.800' => 'acertr', 'Atru.chr7.1273' => 'acertr', 'Atru.chr9.1474' => 'acertr', 'AUR62001469' => 'cqu', 'AUR62008117' => 'cqu', 'AUR62010537' => 'cqu', 'AUR62011044' => 'cqu', 'AUR62013941' => 'cqu', 'AUR62017358' => 'cqu', 'AUR62019668' => 'cqu', 'AUR62028695' => 'cqu', 'AUR62033421' => 'cqu', 'BcaB01g01709' => 'bca', 'BcaB01g02661' => 'bca', 'BcaB02g09151' => 'bca', 'BcaB06g26742' => 'bca', 'BcaC01g04609' => 'bca', 'BcaC02g07446' => 'bca', 'BcaC04g21192' => 'bca', 'BcaC06g35809' => 'bca', 'BcaC08g47434' => 'bca', 'BcaNung01667' => 'bca', 'BcaNung06079' => 'bca', 'BcaNung06080' => 'bca', 'BolC3t15884H' => 'bol', 'BolC4t22476H' => 'bol', 'BolC4t28190H' => 'bol', 'BolC6t40265H' => 'bol', 'BolC7t41527H' => 'bol', 'BolC7t45715H' => 'bol', 'BolC9t56287H' => 'bol', 'BraA03t12148Z' => 'bra', 'BraA03t14451Z' => 'bra', 'BraA03t14607Z' => 'bra', 'BraA03t14608Z' => 'bra', 'BraA03t14610Z' => 'bra', 'BraA03t14612Z' => 'bra', 'BraA04t18424Z' => 'bra', 'BraA05t19707Z' => 'bra', 'BraA07t28489Z' => 'bra', 'BraA07t31890Z' => 'bra', 'BraA09t38280Z' => 'bra', 'C03p35740' => 'bna', 'C04p08880' => 'bna', 'C04p66880' => 'bna', 'C06p52460' => 'bna', 'C07p10620' => 'bna', 'C07p52200' => 'bna', 'C07p52220' => 'bna', 'C09p34440' => 'bna', 'CAN.G1101.3' => 'can', 'CAN.G1237.30' => 'can', 'CAN.G1394.23' => 'can', 'CAN.G2125.2' => 'can', 'CAN.G284.3' => 'can', 'CANSAT01G3037' => 'cansat', 'CANSAT35G0243' => 'cansat', 'CANSAT56G1032' => 'cansat', 'CANSAT56G4068' => 'cansat', 'CARHR072050' => 'chi', 'CARHR101710' => 'chi', 'CARHR119060' => 'chi', 'CARHR229870' => 'chi', 'CARHR254200' => 'chi', 'Carub.0002s2541' => 'cru', 'Carub.0003s2572' => 'cru', 'Carub.0004s0740' => 'cru', 'Carub.0006s3113' => 'cru', 'Carub.0007s1843' => 'cru', 'Ca_03924_v3' => 'car', 'Ca_06680_v3' => 'car', 'Ca_06681_v3' => 'car', 'Ca_07480_v3' => 'car', 'Ca_21720_v3' => 'car', 'Ca_23716_v3' => 'car', 'Ca_26967_v3' => 'car', 'CBR_g40022' => 'cbr', 'CBR_g40023' => 'cbr', 'Cc01_g16100' => 'ccan', 'Cc02_g23100' => 'ccan', 'Cc05_g10620' => 'ccan', 'Cc06_g09180' => 'ccan', 'Cc08_g13510' => 'ccan', 'CDE01G0021' => 'cde', 'CDE05G1302' => 'cde', 'CDE05G2171' => 'cde', 'CDE06G0292' => 'cde', 'CDE06G2531' => 'cde', 'CDE07G0438' => 'cde', 'CDE11G0956' => 'cde', 'Cfa003304' => 'cfa', 'Cfa004493' => 'cfa', 'Cfa010672' => 'cfa', 'Cfa012043' => 'cfa', 'Ciclev10001198m.g' => 'ccl', 'Ciclev10008416m.g' => 'ccl', 'Ciclev10015435m.g' => 'ccl', 'Ciclev10020318m.g' => 'ccl', 'Ciclev10020346m.g' => 'ccl', 'CiPaw.03G236900' => 'cil', 'CiPaw.05G005300' => 'cil', 'CiPaw.11G145100' => 'cil', 'CiPaw.12G110000' => 'cil', 'CiPaw.13G057400' => 'cil', 'ClCG00G000060' => 'cla', 'ClCG06G010520' => 'cla', 'ClCG09G008190' => 'cla', 'ClCG10G003310' => 'cla', 'ClCG10G007030' => 'cla', 'ClCG10G007050' => 'cla', 'ClCG11G017120' => 'cla', 'COL.COLO4_03605' => 'col', 'COL.COLO4_17731' => 'col', 'COL.COLO4_23836' => 'col', 'COL.COLO4_26566' => 'col', 'COL.COLO4_34960' => 'col', 'Cpa.g.sc113.50' => 'cpa', 'Cpa.g.sc1720.1' => 'cpa', 'Cpa.g.sc29.61' => 'cpa', 'Cpa.g.sc682.5' => 'cpa', 'Cpa.g.sc8.67' => 'cpa', 'Cre10.g448350' => 'cre', 'Cre12.g532500' => 'cre', 'Cre17.g725650' => 'cre', 'CsaV3_1G030990' => 'csa', 'CsaV3_3G003330' => 'csa', 'CsaV3_3G006360' => 'csa', 'CsaV3_3G006370' => 'csa', 'CsaV3_4G032780' => 'csa', 'CsaV3_7G026860' => 'csa', 'CSS0004534' => 'camsi', 'CSS0008690' => 'camsi', 'CSS0009276' => 'camsi', 'CSS0010557' => 'camsi', 'CSS0023217' => 'camsi', 'CSS0024707' => 'camsi', 'CSS0026808' => 'camsi', 'CSS0030160' => 'camsi', 'CSS0044087' => 'camsi', 'CSS0045366' => 'camsi', 'DCAR_006674' => 'dca', 'DCAR_006793' => 'dca', 'DCAR_012694' => 'dca', 'DCAR_017587' => 'dca', 'DCAR_020847' => 'dca', 'Dinv10444' => 'din', 'Dinv19403' => 'din', 'Dinv26700' => 'din', 'Dinv28808' => 'din', 'Dinv36591' => 'din', 'Dinv37739' => 'din', 'Dinv39055' => 'din', 'Dinv41560' => 'din', 'Duzib084G1296' => 'dzi', 'Duzib132G0520' => 'dzi', 'Duzib138G0240' => 'dzi', 'Duzib150G0624' => 'dzi', 'Duzib187G0454' => 'dzi', 'Duzib187G1914' => 'dzi', 'Duzib205G1220' => 'dzi', 'Duzib211G0104' => 'dzi', 'ECA234G0075' => 'eca', 'ECA234G0636' => 'eca', 'ECA240G1417' => 'eca', 'ECA240G3303' => 'eca', 'ECA247G1772' => 'eca', 'EL10Ac4g08437' => 'bvu', 'EL10Ac4g08445' => 'bvu', 'EL10Ac5g10622' => 'bvu', 'EL10Ac5g12655' => 'bvu', 'EL10Ac8g18562' => 'bvu', 'Eucgr.C01098' => 'egr', 'Eucgr.E00493' => 'egr', 'Eucgr.E00495' => 'egr', 'Eucgr.E00496' => 'egr', 'Eucgr.F03227' => 'egr', 'Eucgr.K02087' => 'egr', 'FAN04G0330' => 'fan', 'FAN08G1877' => 'fan', 'FAN11G0107' => 'fan', 'FAN13G3095' => 'fan', 'FAN15G3350' => 'fan', 'FAN16G1964' => 'fan', 'FAN18G1821' => 'fan', 'FAN19G2692' => 'fan', 'FAN21G2606' => 'fan', 'FAN24G2729' => 'fan', 'FAN25G0219' => 'fan', 'FAN26G1677' => 'fan', 'FAN27G0924' => 'fan', 'FAN27G2532' => 'fan', 'FAN28G0154' => 'fan', 'FvH4_1g04160' => 'fve', 'FvH4_2g17730' => 'fve', 'FvH4_3g17590' => 'fve', 'FvH4_5g00950' => 'fve', 'Glyma.01G213400' => 'gma', 'Glyma.03G041400' => 'gma', 'Glyma.05G011700' => 'gma', 'Glyma.08G344000' => 'gma', 'Glyma.11G028500' => 'gma', 'Glyma.12G234600' => 'gma', 'Glyma.13G264300' => 'gma', 'Glyma.17G119900' => 'gma', 'Gohir.A01G046900' => 'ghi', 'Gohir.A04G133050' => 'ghi', 'Gohir.A04G133500' => 'ghi', 'Gohir.A06G059400' => 'ghi', 'Gohir.A07G196600' => 'ghi', 'Gohir.A08G048000' => 'ghi', 'Gohir.A12G222600' => 'ghi', 'Gohir.A13G197200' => 'ghi', 'Gohir.D01G037600' => 'ghi', 'Gohir.D04G176600' => 'ghi', 'Gohir.D06G057600' => 'ghi', 'Gohir.D07G202900' => 'ghi', 'Gohir.D07G203000' => 'ghi', 'Gohir.D08G058100' => 'ghi', 'Gohir.D12G225100' => 'ghi', 'Gohir.D13G202500' => 'ghi', 'Gohir.D13G202650' => 'ghi', 'Gorai.001G228400' => 'gra', 'Gorai.002G045800' => 'gra', 'Gorai.003G059400' => 'gra', 'Gorai.004G059400' => 'gra', 'Gorai.004G059600' => 'gra', 'Gorai.004G059800' => 'gra', 'Gorai.004G060000' => 'gra', 'Gorai.008G241200' => 'gra', 'Gorai.010G067700' => 'gra', 'Gorai.011G136100' => 'gra', 'Gorai.012G168600' => 'gra', 'Gorai.012G169500' => 'gra', 'Gorai.013G231400' => 'gra', 'Gorai.013G231700' => 'gra', 'GSVIVG01003813001' => 'vvi', 'GSVIVG01014084001' => 'vvi', 'GSVIVG01014085001' => 'vvi', 'GSVIVG01015459001' => 'vvi', 'GSVIVG01023255001' => 'vvi', 'HanXRQChr01g0027191' => 'han', 'HanXRQChr03g0087371' => 'han', 'HanXRQChr07g0193281' => 'han', 'HanXRQChr08g0226421' => 'han', 'HanXRQChr08g0231881' => 'han', 'HanXRQChr09g0238611' => 'han', 'HanXRQChr09g0243901' => 'han', 'HanXRQChr10g0305601' => 'han', 'HanXRQChr12g0382021' => 'han', 'HanXRQChr13g0393571' => 'han', 'HanXRQChr13g0417211' => 'han', 'HanXRQChr13g0422401' => 'han', 'Haze_03598' => 'cav', 'Haze_08446' => 'cav', 'Haze_09024' => 'cav', 'Haze_09029' => 'cav', 'Haze_09034' => 'cav', 'Haze_10048' => 'cav', 'Haze_25657' => 'cav', 'Hma1.2p1_0018F.1_g013040' => 'hma', 'Hma1.2p1_0138F.1_g062960' => 'hma', 'Hma1.2p1_0161F.1_g071415' => 'hma', 'Hma1.2p1_2174F.1_g316050' => 'hma', 'HPP92_001547' => 'vpl', 'HPP92_008099' => 'vpl', 'HPP92_011385' => 'vpl', 'HPP92_018428' => 'vpl', 'HPP92_021804' => 'vpl', 'Hund09168' => 'sun', 'Hund09470' => 'sun', 'Hund10402' => 'sun', 'Hund14677' => 'sun', 'Hund15466' => 'sun', 'Lalb_Chr01g0016271' => 'lal', 'Lalb_Chr07g0178681' => 'lal', 'Lalb_Chr09g0324591' => 'lal', 'Lalb_Chr12g0197651' => 'lal', 'Lalb_Chr19g0126141' => 'lal', 'Lj1A101G44' => 'lonja', 'Lj1A822T51' => 'lonja', 'Lj1g0017934' => 'lja', 'Lj2C204T5' => 'lonja', 'Lj2g0012794' => 'lja', 'Lj2g0023300' => 'lja', 'Lj3g0014038' => 'lja', 'Lj4g0024728' => 'lja', 'Lj5A262G66' => 'lonja', 'Lj7A638T62' => 'lonja', 'Lsat_1_v5_gn_5_126301' => 'lsa', 'Lsat_1_v5_gn_6_88660' => 'lsa', 'Lsat_1_v5_gn_6_88680' => 'lsa', 'Lsat_1_v5_gn_6_88700' => 'lsa', 'Lsat_1_v5_gn_6_88720' => 'lsa', 'Lsat_1_v5_gn_9_120381' => 'lsa', 'Lsat_1_v5_gn_9_16381' => 'lsa', 'Manes.01G071200' => 'mes', 'Manes.03G078100' => 'mes', 'Manes.07G023600' => 'mes', 'Manes.10G118900' => 'mes', 'Manes.13G054700' => 'mes', 'Manes.16G063700' => 'mes', 'Mapoly0002s0291' => 'mpo', 'Mapoly0020s0121' => 'mpo', 'Mapoly0030s0051' => 'mpo', 'Mapoly0050s0070' => 'mpo', 'MBI01_g03565_MAGBIO' => 'mbi', 'MBI01_g45790_MAGBIO' => 'mbi', 'MBI02_g32395_MAGBIO' => 'mbi', 'MBI02_g32396_MAGBIO' => 'mbi', 'MBI04_g32263_MAGBIO' => 'mbi', 'MBI07_g00629_MAGBIO' => 'mbi', 'MBI09_g28076_MAGBIO' => 'mbi', 'MBI17_g42497_MAGBIO' => 'mbi', 'MCO09G631' => 'mco', 'MCO14G078' => 'mco', 'MD02G1040100' => 'mdo', 'MD03G1250900' => 'mdo', 'MD03G1251000' => 'mdo', 'MD03G1251100' => 'mdo', 'MD03G1251200' => 'mdo', 'MD04G1070000' => 'mdo', 'MD04G1070100' => 'mdo', 'MD04G1076800' => 'mdo', 'MD05G1158500' => 'mdo', 'MD10G1052000' => 'mdo', 'MD10G1151500' => 'mdo', 'MD11G1271200' => 'mdo', 'MD11G1271700' => 'mdo', 'MD11G1271800' => 'mdo', 'MD15G1145000' => 'mdo', 'Medtr2g073070' => 'mtr', 'Medtr2g073080' => 'mtr', 'Medtr2g073190' => 'mtr', 'Medtr2g078500' => 'mtr', 'Medtr4g113090' => 'mtr', 'Medtr5g011440' => 'mtr', 'Medtr5g011450' => 'mtr', 'Medtr7g053090' => 'mtr', 'MELO3C012726.2' => 'cme', 'MELO3C014000.2' => 'cme', 'MELO3C016503.2' => 'cme', 'MELO3C016505.2' => 'cme', 'MELO3C025304.2' => 'cme', 'MELO3C025675.2' => 'cme', 'MELO3C029124.2' => 'cme', 'Migut.A00837' => 'egut', 'Migut.A00874' => 'egut', 'Migut.M00688' => 'egut', 'Migut.N00666' => 'egut', 'Migut.N00828' => 'egut', 'MSTRG.12040' => 'ama', 'MSTRG.12057' => 'ama', 'MSTRG.14988' => 'ama', 'MSTRG.17970' => 'ama', 'MSTRG.25550' => 'ama', 'Nitab4.5_0000038g0160' => 'nta', 'Nitab4.5_0000092g0190' => 'nta', 'Nitab4.5_0000092g0330' => 'nta', 'Nitab4.5_0000432g0050' => 'nta', 'Nitab4.5_0000667g0060' => 'nta', 'Nitab4.5_0000787g0260' => 'nta', 'Nitab4.5_0001265g0140' => 'nta', 'Nitab4.5_0001386g0010' => 'nta', 'Nitab4.5_0001816g0080' => 'nta', 'Nitab4.5_0002550g0030' => 'nta', 'Nitab4.5_0004516g0020' => 'nta', 'Nitab4.5_0005122g0030' => 'nta', 'Nitab4.5_0005122g0040' => 'nta', 'Nitab4.5_0007295g0040' => 'nta', 'Nn1g01188' => 'nnu', 'Nn1g08270' => 'nnu', 'Nn2g10341' => 'nnu', 'Nn2g11861' => 'nnu', 'Nn3g20955' => 'nnu', 'Nn8g39317' => 'nnu', 'Nn8g40352' => 'nnu', 'Oeu010037.1' => 'oeu', 'Oeu010038.1' => 'oeu', 'Oeu018253.4' => 'oeu', 'Oeu048663.1' => 'oeu', 'Oeu049584.1' => 'oeu', 'Oeu049585.1' => 'oeu', 'Oeu049813.3' => 'oeu', 'Oeu057828.1' => 'oeu', 'Oeu064607.2' => 'oeu', 'Os01g0645200' => 'osa', 'Os02g0475400' => 'osa', 'Os04g0381100' => 'osa', 'Os09g0520600' => 'osa', 'Os12g0170300' => 'osa', 'Peaxi162Scf00000g76016' => 'pax', 'Peaxi162Scf00011g01123' => 'pax', 'Peaxi162Scf00044g01817' => 'pax', 'Peaxi162Scf00044g01826' => 'pax', 'Peaxi162Scf00047g02459' => 'pax', 'Peaxi162Scf00047g02462' => 'pax', 'Peaxi162Scf00102g01356' => 'pax', 'Peaxi162Scf00225g00623' => 'pax', 'Peaxi162Scf00335g00069' => 'pax', 'Peaxi162Scf02228g00005' => 'pax', 'PGR031G3430' => 'pgr', 'PGR042G3659' => 'pgr', 'PGR142G1561' => 'pgr', 'PGR142G1792' => 'pgr', 'PGSC0003DMG400001256' => 'stu', 'PGSC0003DMG400012516' => 'stu', 'PGSC0003DMG400019027' => 'stu', 'PGSC0003DMG400028882' => 'stu', 'Phvul.002G151900' => 'pvu', 'Phvul.003G159600' => 'pvu', 'Phvul.005G076100' => 'pvu', 'Phvul.005G078101' => 'pvu', 'Phvul.008G136700' => 'pvu', 'Potri.003G008700' => 'ptr', 'Potri.003G117300' => 'ptr', 'Potri.011G103200' => 'ptr', 'Potri.014G178000' => 'ptr', 'Potri.017G069350' => 'ptr', 'Potri.018G074400' => 'ptr', 'Pp3c14_2960' => 'ppa', 'Pp3c18_12460' => 'ppa', 'Pp3c20_2280' => 'ppa', 'Pp3c23_17660' => 'ppa', 'Pp3c5_7360' => 'ppa', 'Pp3c6_18611' => 'ppa', 'Pp3c6_19720' => 'ppa', 'Pp3c7_7830' => 'ppa', 'PRCOL_00000738' => 'pco', 'PRCOL_00003803' => 'pco', 'PRCOL_00004648' => 'pco', 'Prupe.1G578600' => 'ppe', 'Prupe.4G155400' => 'ppe', 'Prupe.4G251800' => 'ppe', 'Prupe.5G082600' => 'ppe', 'Prupe.5G099300' => 'ppe', 'Prupe.6G004300' => 'ppe', 'Prupe.7G235600' => 'ppe', 'Prupe.8G189900' => 'ppe', 'Psat0s3891g0080' => 'psa', 'Psat0s944g0200' => 'psa', 'Psat1g007560' => 'psa', 'Psat1g007600' => 'psa', 'Psat2g180440' => 'psa', 'Psat2g180480' => 'psa', 'PSO017G6369' => 'pso', 'PSO170G2819' => 'pso', 'PSO170G3630' => 'pso', 'PSO357G0694' => 'pso', 'PSO478G2124' => 'pso', 'PSO541G4101' => 'pso', 'PSO675G4586' => 'pso', 'PSO675G8358' => 'pso', 'PSO782G0848' => 'pso', 'QL02p086503' => 'qlo', 'QL02p100337' => 'qlo', 'QL09p046703' => 'qlo', 'QL12p015803' => 'qlo', 'QL93p0263_0060' => 'qlo', 'RcHm_v2.0_Chr1g0359741' => 'rch', 'RcHm_v2.0_Chr2g0089661' => 'rch', 'RcHm_v2.0_Chr5g0029301' => 'rch', 'RcHm_v2.0_Chr6g0282761' => 'rch', 'RcHm_v2.0_Chr6g0282771' => 'rch', 'RcHm_v2.0_Chr7g0200441' => 'rch', 'Rhsim01G0089900' => 'rsi', 'Rhsim04G0110500' => 'rsi', 'Rhsim05G0172400' => 'rsi', 'Rhsim13G0053000' => 'rsi', 'RhsimUnG0206100' => 'rsi', 'Sabra03G0004300' => 'sbr', 'Sabra03G0081700' => 'sbr', 'Sabra11G0077500' => 'sbr', 'Sabra11G0082400' => 'sbr', 'Sabra14G0136100' => 'sbr', 'Sabra18G0063400' => 'sbr', 'SalBow3G1699' => 'sbo', 'SalBow3G4188' => 'sbo', 'SalBow6G4468' => 'sbo', 'SalBow6G6325' => 'sbo', 'SalBow8G5603' => 'sbo', 'Sc01g0009070' => 'sci', 'Sc05g0001740' => 'sci', 'Sc07g0005160' => 'sci', 'Sc16g0007780' => 'sci', 'Sc18g0000940' => 'sci', 'Sed0007276' => 'sed', 'Sed0008675' => 'sed', 'Sed0011001' => 'sed', 'Sed0014303' => 'sed', 'Sed0016281' => 'sed', 'Sed0019845' => 'sed', 'SEGI_02510' => 'sgi', 'SEGI_05556' => 'sgi', 'SEGI_13894' => 'sgi', 'SEGI_19861' => 'sgi', 'SEGI_39487' => 'sgi', 'SGA_v2.0_scaffold120G32811' => 'sas', 'SGA_v2.0_scaffold37G14858' => 'sas', 'SGA_v2.0_scaffold42G15906' => 'sas', 'SGA_v2.0_scaffold73G24378' => 'sas', 'SGA_v2.0_scaffold77G25297' => 'sas', 'SHI03889' => 'shi', 'SMO143G0190' => 'smo', 'SMO146G0261' => 'smo', 'SMO230G0059' => 'smo', 'SMO367G0186' => 'smo', 'Solyc01g103620.4' => 'sly', 'Solyc05g017950.3' => 'sly', 'Solyc08g007590.3' => 'sly', 'Solyc09g055940.3' => 'sly', 'Solyc10g038090.1' => 'sly', 'Solyc10g038100.1' => 'sly', 'Solyc12g005410.2' => 'sly', 'Sopen01g045990' => 'spe', 'Sopen01g046020' => 'spe', 'Sopen01g046030' => 'spe', 'Sopen05g014570' => 'spe', 'Sopen09g021810' => 'spe', 'Sopen12g001380' => 'spe', 'Sp3g22950' => 'spa', 'Sp4g21150' => 'spa', 'Sp5g33650' => 'spa', 'Sp6g05480' => 'spa', 'Sp7g09790' => 'spa', 'Sp7g20900' => 'spa', 'TAR184G0001' => 'tar', 'TAR375G0451' => 'tar', 'TAR625G0148' => 'tar', 'TAR628G1147' => 'tar', 'TAR629G1459' => 'tar', 'THA.LOC104808812' => 'tha', 'THA.LOC104812302' => 'tha', 'THA.LOC104814036' => 'tha', 'THA.LOC104815245' => 'tha', 'THA.LOC104826532' => 'tha', 'Thecc.01G210500' => 'tca', 'Thecc.02G019300' => 'tca', 'Thecc.03G264500' => 'tca', 'Thecc.07G135000' => 'tca', 'Thecc.09G117500' => 'tca', 'Thhalv10002537m.g' => 'esa', 'Thhalv10016729m.g' => 'esa', 'Thhalv10018656m.g' => 'esa', 'Thhalv10025337m.g' => 'esa', 'Thhalv10028698m.g' => 'esa', 'TPR.G11051' => 'tpr', 'TPR.G19569' => 'tpr', 'TPR.G26797' => 'tpr', 'TPR.G26829' => 'tpr', 'TPR.G35008' => 'tpr', 'TWI15G0455' => 'twi', 'TWI18G0798' => 'twi', 'TWI32G0927' => 'twi', 'TWI38G0474' => 'twi', 'TWI59G1092' => 'twi', 'unitig_0.g415' => 'ugi', 'unitig_21.g20529' => 'ugi', 'unitig_22.g5484' => 'ugi', 'unitig_22.g6855' => 'ugi', 'unitig_62.g23077' => 'ugi', 'vmacro00215' => 'vma', 'vmacro02819' => 'vma', 'vmacro09420' => 'vma', 'vmacro19866' => 'vma', 'vmacro20679' => 'vma', 'VMungo1080G0497' => 'vmu', 'VMungo1080G0956' => 'vmu', 'VMungo1215G0078' => 'vmu', 'VMungo1215G2965' => 'vmu', 'VMungo1215G3122' => 'vmu', 'VMungo1383G2670' => 'vmu', 'Zm00001eb043270' => 'zma', 'Zm00001eb139050' => 'zma', 'Zm00001eb318760' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000943', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000943' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000943', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '636', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000943' ) ), 'genes' => array( 'A03p29530' => 'bna', 'A03p53820' => 'bna', 'A04p29590' => 'bna', 'A05p07410' => 'bna', 'A07p06990' => 'bna', 'A07p43810' => 'bna', 'A09p27090' => 'bna', 'Aa31LG4G2400' => 'aar', 'Aa31LG4G2410' => 'aar', 'Aa31LG5G8880' => 'aar', 'Aa31LG6G4700' => 'aar', 'Aa31LG6G4910' => 'aar', 'Aa31LG9G10450' => 'aar', 'Aa31sc38G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2793' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2927' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.489' => 'aag', 'Actinidia01604' => 'ach', 'Actinidia02071' => 'ach', 'Actinidia03621' => 'ach', 'Actinidia09395' => 'ach', 'Actinidia14485' => 'ach', 'Actinidia23356' => 'ach', 'Actinidia30013' => 'ach', 'Ah.02g116300' => 'amhyb', 'Ah.02g128290' => 'amhyb', 'Ah.04g163940' => 'amhyb', 'Ah.09g227470' => 'amhyb', 'Ah.11g050980' => 'amhyb', 'AL2G38960' => 'aly', 'AL3G41280' => 'aly', 'AL4G20130' => 'aly', 'AL6G46830' => 'aly', 'AL7G30670' => 'aly', 'Aqoxy1G01881' => 'aox', 'Aqoxy5G00043' => 'aox', 'Aqoxy7G00587' => 'aox', 'Aqoxy7G01922' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1K7GD6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1RUKD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AQV2BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AVJ0IE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BUF90N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DI6VX2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P2VAYP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4LTZI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WT9QCD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X0ENSR' => 'arhy', 'AT1G78560' => 'ath', 'AT2G26900' => 'ath', 'AT3G25410' => 'ath', 'AT4G12030' => 'ath', 'AT4G22840' => 'ath', 'ATR0083G040' => 'atr', 'ATR0584G051' => 'atr', 'ATR0609G010' => 'atr', 'ATR0757G175' => 'atr', 'ATR0763G119' => 'atr', 'ATR0810G012' => 'atr', 'Atru.chr6.3542' => 'acertr', 'Atru.chr6.800' => 'acertr', 'Atru.chr7.1273' => 'acertr', 'Atru.chr9.1474' => 'acertr', 'AUR62001469' => 'cqu', 'AUR62008117' => 'cqu', 'AUR62010537' => 'cqu', 'AUR62011044' => 'cqu', 'AUR62013941' => 'cqu', 'AUR62017358' => 'cqu', 'AUR62019668' => 'cqu', 'AUR62028695' => 'cqu', 'AUR62033421' => 'cqu', 'BcaB01g01709' => 'bca', 'BcaB01g02661' => 'bca', 'BcaB02g09151' => 'bca', 'BcaB06g26742' => 'bca', 'BcaC01g04609' => 'bca', 'BcaC02g07446' => 'bca', 'BcaC04g21192' => 'bca', 'BcaC06g35809' => 'bca', 'BcaC08g47434' => 'bca', 'BcaNung01667' => 'bca', 'BcaNung06079' => 'bca', 'BcaNung06080' => 'bca', 'BolC3t15884H' => 'bol', 'BolC4t22476H' => 'bol', 'BolC4t28190H' => 'bol', 'BolC6t40265H' => 'bol', 'BolC7t41527H' => 'bol', 'BolC7t45715H' => 'bol', 'BolC9t56287H' => 'bol', 'BraA03t12148Z' => 'bra', 'BraA03t14451Z' => 'bra', 'BraA03t14607Z' => 'bra', 'BraA03t14608Z' => 'bra', 'BraA03t14610Z' => 'bra', 'BraA03t14612Z' => 'bra', 'BraA04t18424Z' => 'bra', 'BraA05t19707Z' => 'bra', 'BraA07t28489Z' => 'bra', 'BraA07t31890Z' => 'bra', 'BraA09t38280Z' => 'bra', 'C03p35740' => 'bna', 'C04p08880' => 'bna', 'C04p66880' => 'bna', 'C06p52460' => 'bna', 'C07p10620' => 'bna', 'C07p52200' => 'bna', 'C07p52220' => 'bna', 'C09p34440' => 'bna', 'CAN.G1101.3' => 'can', 'CAN.G1237.30' => 'can', 'CAN.G1394.23' => 'can', 'CAN.G2125.2' => 'can', 'CAN.G284.3' => 'can', 'CANSAT01G3037' => 'cansat', 'CANSAT35G0243' => 'cansat', 'CANSAT56G1032' => 'cansat', 'CANSAT56G4068' => 'cansat', 'CARHR072050' => 'chi', 'CARHR101710' => 'chi', 'CARHR119060' => 'chi', 'CARHR229870' => 'chi', 'CARHR254200' => 'chi', 'Carub.0002s2541' => 'cru', 'Carub.0003s2572' => 'cru', 'Carub.0004s0740' => 'cru', 'Carub.0006s3113' => 'cru', 'Carub.0007s1843' => 'cru', 'Ca_03924_v3' => 'car', 'Ca_06680_v3' => 'car', 'Ca_06681_v3' => 'car', 'Ca_07480_v3' => 'car', 'Ca_21720_v3' => 'car', 'Ca_23716_v3' => 'car', 'Ca_26967_v3' => 'car', 'CBR_g40022' => 'cbr', 'CBR_g40023' => 'cbr', 'Cc01_g16100' => 'ccan', 'Cc02_g23100' => 'ccan', 'Cc05_g10620' => 'ccan', 'Cc06_g09180' => 'ccan', 'Cc08_g13510' => 'ccan', 'CDE01G0021' => 'cde', 'CDE05G1302' => 'cde', 'CDE05G2171' => 'cde', 'CDE06G0292' => 'cde', 'CDE06G2531' => 'cde', 'CDE07G0438' => 'cde', 'CDE11G0956' => 'cde', 'Cfa003304' => 'cfa', 'Cfa004493' => 'cfa', 'Cfa010672' => 'cfa', 'Cfa012043' => 'cfa', 'Ciclev10001198m.g' => 'ccl', 'Ciclev10008416m.g' => 'ccl', 'Ciclev10015435m.g' => 'ccl', 'Ciclev10020318m.g' => 'ccl', 'Ciclev10020346m.g' => 'ccl', 'CiPaw.03G236900' => 'cil', 'CiPaw.05G005300' => 'cil', 'CiPaw.11G145100' => 'cil', 'CiPaw.12G110000' => 'cil', 'CiPaw.13G057400' => 'cil', 'ClCG00G000060' => 'cla', 'ClCG06G010520' => 'cla', 'ClCG09G008190' => 'cla', 'ClCG10G003310' => 'cla', 'ClCG10G007030' => 'cla', 'ClCG10G007050' => 'cla', 'ClCG11G017120' => 'cla', 'COL.COLO4_03605' => 'col', 'COL.COLO4_17731' => 'col', 'COL.COLO4_23836' => 'col', 'COL.COLO4_26566' => 'col', 'COL.COLO4_34960' => 'col', 'Cpa.g.sc113.50' => 'cpa', 'Cpa.g.sc1720.1' => 'cpa', 'Cpa.g.sc29.61' => 'cpa', 'Cpa.g.sc682.5' => 'cpa', 'Cpa.g.sc8.67' => 'cpa', 'Cre10.g448350' => 'cre', 'Cre12.g532500' => 'cre', 'Cre17.g725650' => 'cre', 'CsaV3_1G030990' => 'csa', 'CsaV3_3G003330' => 'csa', 'CsaV3_3G006360' => 'csa', 'CsaV3_3G006370' => 'csa', 'CsaV3_4G032780' => 'csa', 'CsaV3_7G026860' => 'csa', 'CSS0004534' => 'camsi', 'CSS0008690' => 'camsi', 'CSS0009276' => 'camsi', 'CSS0010557' => 'camsi', 'CSS0023217' => 'camsi', 'CSS0024707' => 'camsi', 'CSS0026808' => 'camsi', 'CSS0030160' => 'camsi', 'CSS0044087' => 'camsi', 'CSS0045366' => 'camsi', 'DCAR_006674' => 'dca', 'DCAR_006793' => 'dca', 'DCAR_012694' => 'dca', 'DCAR_017587' => 'dca', 'DCAR_020847' => 'dca', 'Dinv10444' => 'din', 'Dinv19403' => 'din', 'Dinv26700' => 'din', 'Dinv28808' => 'din', 'Dinv36591' => 'din', 'Dinv37739' => 'din', 'Dinv39055' => 'din', 'Dinv41560' => 'din', 'Duzib084G1296' => 'dzi', 'Duzib132G0520' => 'dzi', 'Duzib138G0240' => 'dzi', 'Duzib150G0624' => 'dzi', 'Duzib187G0454' => 'dzi', 'Duzib187G1914' => 'dzi', 'Duzib205G1220' => 'dzi', 'Duzib211G0104' => 'dzi', 'ECA234G0075' => 'eca', 'ECA234G0636' => 'eca', 'ECA240G1417' => 'eca', 'ECA240G3303' => 'eca', 'ECA247G1772' => 'eca', 'EL10Ac4g08437' => 'bvu', 'EL10Ac4g08445' => 'bvu', 'EL10Ac5g10622' => 'bvu', 'EL10Ac5g12655' => 'bvu', 'EL10Ac8g18562' => 'bvu', 'Eucgr.C01098' => 'egr', 'Eucgr.E00493' => 'egr', 'Eucgr.E00495' => 'egr', 'Eucgr.E00496' => 'egr', 'Eucgr.F03227' => 'egr', 'Eucgr.K02087' => 'egr', 'FAN04G0330' => 'fan', 'FAN08G1877' => 'fan', 'FAN11G0107' => 'fan', 'FAN13G3095' => 'fan', 'FAN15G3350' => 'fan', 'FAN16G1964' => 'fan', 'FAN18G1821' => 'fan', 'FAN19G2692' => 'fan', 'FAN21G2606' => 'fan', 'FAN24G2729' => 'fan', 'FAN25G0219' => 'fan', 'FAN26G1677' => 'fan', 'FAN27G0924' => 'fan', 'FAN27G2532' => 'fan', 'FAN28G0154' => 'fan', 'FvH4_1g04160' => 'fve', 'FvH4_2g17730' => 'fve', 'FvH4_3g17590' => 'fve', 'FvH4_5g00950' => 'fve', 'Glyma.01G213400' => 'gma', 'Glyma.03G041400' => 'gma', 'Glyma.05G011700' => 'gma', 'Glyma.08G344000' => 'gma', 'Glyma.11G028500' => 'gma', 'Glyma.12G234600' => 'gma', 'Glyma.13G264300' => 'gma', 'Glyma.17G119900' => 'gma', 'Gohir.A01G046900' => 'ghi', 'Gohir.A04G133050' => 'ghi', 'Gohir.A04G133500' => 'ghi', 'Gohir.A06G059400' => 'ghi', 'Gohir.A07G196600' => 'ghi', 'Gohir.A08G048000' => 'ghi', 'Gohir.A12G222600' => 'ghi', 'Gohir.A13G197200' => 'ghi', 'Gohir.D01G037600' => 'ghi', 'Gohir.D04G176600' => 'ghi', 'Gohir.D06G057600' => 'ghi', 'Gohir.D07G202900' => 'ghi', 'Gohir.D07G203000' => 'ghi', 'Gohir.D08G058100' => 'ghi', 'Gohir.D12G225100' => 'ghi', 'Gohir.D13G202500' => 'ghi', 'Gohir.D13G202650' => 'ghi', 'Gorai.001G228400' => 'gra', 'Gorai.002G045800' => 'gra', 'Gorai.003G059400' => 'gra', 'Gorai.004G059400' => 'gra', 'Gorai.004G059600' => 'gra', 'Gorai.004G059800' => 'gra', 'Gorai.004G060000' => 'gra', 'Gorai.008G241200' => 'gra', 'Gorai.010G067700' => 'gra', 'Gorai.011G136100' => 'gra', 'Gorai.012G168600' => 'gra', 'Gorai.012G169500' => 'gra', 'Gorai.013G231400' => 'gra', 'Gorai.013G231700' => 'gra', 'GSVIVG01003813001' => 'vvi', 'GSVIVG01014084001' => 'vvi', 'GSVIVG01014085001' => 'vvi', 'GSVIVG01015459001' => 'vvi', 'GSVIVG01023255001' => 'vvi', 'HanXRQChr01g0027191' => 'han', 'HanXRQChr03g0087371' => 'han', 'HanXRQChr07g0193281' => 'han', 'HanXRQChr08g0226421' => 'han', 'HanXRQChr08g0231881' => 'han', 'HanXRQChr09g0238611' => 'han', 'HanXRQChr09g0243901' => 'han', 'HanXRQChr10g0305601' => 'han', 'HanXRQChr12g0382021' => 'han', 'HanXRQChr13g0393571' => 'han', 'HanXRQChr13g0417211' => 'han', 'HanXRQChr13g0422401' => 'han', 'Haze_03598' => 'cav', 'Haze_08446' => 'cav', 'Haze_09024' => 'cav', 'Haze_09029' => 'cav', 'Haze_09034' => 'cav', 'Haze_10048' => 'cav', 'Haze_25657' => 'cav', 'Hma1.2p1_0018F.1_g013040' => 'hma', 'Hma1.2p1_0138F.1_g062960' => 'hma', 'Hma1.2p1_0161F.1_g071415' => 'hma', 'Hma1.2p1_2174F.1_g316050' => 'hma', 'HPP92_001547' => 'vpl', 'HPP92_008099' => 'vpl', 'HPP92_011385' => 'vpl', 'HPP92_018428' => 'vpl', 'HPP92_021804' => 'vpl', 'Hund09168' => 'sun', 'Hund09470' => 'sun', 'Hund10402' => 'sun', 'Hund14677' => 'sun', 'Hund15466' => 'sun', 'Lalb_Chr01g0016271' => 'lal', 'Lalb_Chr07g0178681' => 'lal', 'Lalb_Chr09g0324591' => 'lal', 'Lalb_Chr12g0197651' => 'lal', 'Lalb_Chr19g0126141' => 'lal', 'Lj1A101G44' => 'lonja', 'Lj1A822T51' => 'lonja', 'Lj1g0017934' => 'lja', 'Lj2C204T5' => 'lonja', 'Lj2g0012794' => 'lja', 'Lj2g0023300' => 'lja', 'Lj3g0014038' => 'lja', 'Lj4g0024728' => 'lja', 'Lj5A262G66' => 'lonja', 'Lj7A638T62' => 'lonja', 'Lsat_1_v5_gn_5_126301' => 'lsa', 'Lsat_1_v5_gn_6_88660' => 'lsa', 'Lsat_1_v5_gn_6_88680' => 'lsa', 'Lsat_1_v5_gn_6_88700' => 'lsa', 'Lsat_1_v5_gn_6_88720' => 'lsa', 'Lsat_1_v5_gn_9_120381' => 'lsa', 'Lsat_1_v5_gn_9_16381' => 'lsa', 'Manes.01G071200' => 'mes', 'Manes.03G078100' => 'mes', 'Manes.07G023600' => 'mes', 'Manes.10G118900' => 'mes', 'Manes.13G054700' => 'mes', 'Manes.16G063700' => 'mes', 'Mapoly0002s0291' => 'mpo', 'Mapoly0020s0121' => 'mpo', 'Mapoly0030s0051' => 'mpo', 'Mapoly0050s0070' => 'mpo', 'MBI01_g03565_MAGBIO' => 'mbi', 'MBI01_g45790_MAGBIO' => 'mbi', 'MBI02_g32395_MAGBIO' => 'mbi', 'MBI02_g32396_MAGBIO' => 'mbi', 'MBI04_g32263_MAGBIO' => 'mbi', 'MBI07_g00629_MAGBIO' => 'mbi', 'MBI09_g28076_MAGBIO' => 'mbi', 'MBI17_g42497_MAGBIO' => 'mbi', 'MCO09G631' => 'mco', 'MCO14G078' => 'mco', 'MD02G1040100' => 'mdo', 'MD03G1250900' => 'mdo', 'MD03G1251000' => 'mdo', 'MD03G1251100' => 'mdo', 'MD03G1251200' => 'mdo', 'MD04G1070000' => 'mdo', 'MD04G1070100' => 'mdo', 'MD04G1076800' => 'mdo', 'MD05G1158500' => 'mdo', 'MD10G1052000' => 'mdo', 'MD10G1151500' => 'mdo', 'MD11G1271200' => 'mdo', 'MD11G1271700' => 'mdo', 'MD11G1271800' => 'mdo', 'MD15G1145000' => 'mdo', 'Medtr2g073070' => 'mtr', 'Medtr2g073080' => 'mtr', 'Medtr2g073190' => 'mtr', 'Medtr2g078500' => 'mtr', 'Medtr4g113090' => 'mtr', 'Medtr5g011440' => 'mtr', 'Medtr5g011450' => 'mtr', 'Medtr7g053090' => 'mtr', 'MELO3C012726.2' => 'cme', 'MELO3C014000.2' => 'cme', 'MELO3C016503.2' => 'cme', 'MELO3C016505.2' => 'cme', 'MELO3C025304.2' => 'cme', 'MELO3C025675.2' => 'cme', 'MELO3C029124.2' => 'cme', 'Migut.A00837' => 'egut', 'Migut.A00874' => 'egut', 'Migut.M00688' => 'egut', 'Migut.N00666' => 'egut', 'Migut.N00828' => 'egut', 'MSTRG.12040' => 'ama', 'MSTRG.12057' => 'ama', 'MSTRG.14988' => 'ama', 'MSTRG.17970' => 'ama', 'MSTRG.25550' => 'ama', 'Nitab4.5_0000038g0160' => 'nta', 'Nitab4.5_0000092g0190' => 'nta', 'Nitab4.5_0000092g0330' => 'nta', 'Nitab4.5_0000432g0050' => 'nta', 'Nitab4.5_0000667g0060' => 'nta', 'Nitab4.5_0000787g0260' => 'nta', 'Nitab4.5_0001265g0140' => 'nta', 'Nitab4.5_0001386g0010' => 'nta', 'Nitab4.5_0001816g0080' => 'nta', 'Nitab4.5_0002550g0030' => 'nta', 'Nitab4.5_0004516g0020' => 'nta', 'Nitab4.5_0005122g0030' => 'nta', 'Nitab4.5_0005122g0040' => 'nta', 'Nitab4.5_0007295g0040' => 'nta', 'Nn1g01188' => 'nnu', 'Nn1g08270' => 'nnu', 'Nn2g10341' => 'nnu', 'Nn2g11861' => 'nnu', 'Nn3g20955' => 'nnu', 'Nn8g39317' => 'nnu', 'Nn8g40352' => 'nnu', 'Oeu010037.1' => 'oeu', 'Oeu010038.1' => 'oeu', 'Oeu018253.4' => 'oeu', 'Oeu048663.1' => 'oeu', 'Oeu049584.1' => 'oeu', 'Oeu049585.1' => 'oeu', 'Oeu049813.3' => 'oeu', 'Oeu057828.1' => 'oeu', 'Oeu064607.2' => 'oeu', 'Os01g0645200' => 'osa', 'Os02g0475400' => 'osa', 'Os04g0381100' => 'osa', 'Os09g0520600' => 'osa', 'Os12g0170300' => 'osa', 'Peaxi162Scf00000g76016' => 'pax', 'Peaxi162Scf00011g01123' => 'pax', 'Peaxi162Scf00044g01817' => 'pax', 'Peaxi162Scf00044g01826' => 'pax', 'Peaxi162Scf00047g02459' => 'pax', 'Peaxi162Scf00047g02462' => 'pax', 'Peaxi162Scf00102g01356' => 'pax', 'Peaxi162Scf00225g00623' => 'pax', 'Peaxi162Scf00335g00069' => 'pax', 'Peaxi162Scf02228g00005' => 'pax', 'PGR031G3430' => 'pgr', 'PGR042G3659' => 'pgr', 'PGR142G1561' => 'pgr', 'PGR142G1792' => 'pgr', 'PGSC0003DMG400001256' => 'stu', 'PGSC0003DMG400012516' => 'stu', 'PGSC0003DMG400019027' => 'stu', 'PGSC0003DMG400028882' => 'stu', 'Phvul.002G151900' => 'pvu', 'Phvul.003G159600' => 'pvu', 'Phvul.005G076100' => 'pvu', 'Phvul.005G078101' => 'pvu', 'Phvul.008G136700' => 'pvu', 'Potri.003G008700' => 'ptr', 'Potri.003G117300' => 'ptr', 'Potri.011G103200' => 'ptr', 'Potri.014G178000' => 'ptr', 'Potri.017G069350' => 'ptr', 'Potri.018G074400' => 'ptr', 'Pp3c14_2960' => 'ppa', 'Pp3c18_12460' => 'ppa', 'Pp3c20_2280' => 'ppa', 'Pp3c23_17660' => 'ppa', 'Pp3c5_7360' => 'ppa', 'Pp3c6_18611' => 'ppa', 'Pp3c6_19720' => 'ppa', 'Pp3c7_7830' => 'ppa', 'PRCOL_00000738' => 'pco', 'PRCOL_00003803' => 'pco', 'PRCOL_00004648' => 'pco', 'Prupe.1G578600' => 'ppe', 'Prupe.4G155400' => 'ppe', 'Prupe.4G251800' => 'ppe', 'Prupe.5G082600' => 'ppe', 'Prupe.5G099300' => 'ppe', 'Prupe.6G004300' => 'ppe', 'Prupe.7G235600' => 'ppe', 'Prupe.8G189900' => 'ppe', 'Psat0s3891g0080' => 'psa', 'Psat0s944g0200' => 'psa', 'Psat1g007560' => 'psa', 'Psat1g007600' => 'psa', 'Psat2g180440' => 'psa', 'Psat2g180480' => 'psa', 'PSO017G6369' => 'pso', 'PSO170G2819' => 'pso', 'PSO170G3630' => 'pso', 'PSO357G0694' => 'pso', 'PSO478G2124' => 'pso', 'PSO541G4101' => 'pso', 'PSO675G4586' => 'pso', 'PSO675G8358' => 'pso', 'PSO782G0848' => 'pso', 'QL02p086503' => 'qlo', 'QL02p100337' => 'qlo', 'QL09p046703' => 'qlo', 'QL12p015803' => 'qlo', 'QL93p0263_0060' => 'qlo', 'RcHm_v2.0_Chr1g0359741' => 'rch', 'RcHm_v2.0_Chr2g0089661' => 'rch', 'RcHm_v2.0_Chr5g0029301' => 'rch', 'RcHm_v2.0_Chr6g0282761' => 'rch', 'RcHm_v2.0_Chr6g0282771' => 'rch', 'RcHm_v2.0_Chr7g0200441' => 'rch', 'Rhsim01G0089900' => 'rsi', 'Rhsim04G0110500' => 'rsi', 'Rhsim05G0172400' => 'rsi', 'Rhsim13G0053000' => 'rsi', 'RhsimUnG0206100' => 'rsi', 'Sabra03G0004300' => 'sbr', 'Sabra03G0081700' => 'sbr', 'Sabra11G0077500' => 'sbr', 'Sabra11G0082400' => 'sbr', 'Sabra14G0136100' => 'sbr', 'Sabra18G0063400' => 'sbr', 'SalBow3G1699' => 'sbo', 'SalBow3G4188' => 'sbo', 'SalBow6G4468' => 'sbo', 'SalBow6G6325' => 'sbo', 'SalBow8G5603' => 'sbo', 'Sc01g0009070' => 'sci', 'Sc05g0001740' => 'sci', 'Sc07g0005160' => 'sci', 'Sc16g0007780' => 'sci', 'Sc18g0000940' => 'sci', 'Sed0007276' => 'sed', 'Sed0008675' => 'sed', 'Sed0011001' => 'sed', 'Sed0014303' => 'sed', 'Sed0016281' => 'sed', 'Sed0019845' => 'sed', 'SEGI_02510' => 'sgi', 'SEGI_05556' => 'sgi', 'SEGI_13894' => 'sgi', 'SEGI_19861' => 'sgi', 'SEGI_39487' => 'sgi', 'SGA_v2.0_scaffold120G32811' => 'sas', 'SGA_v2.0_scaffold37G14858' => 'sas', 'SGA_v2.0_scaffold42G15906' => 'sas', 'SGA_v2.0_scaffold73G24378' => 'sas', 'SGA_v2.0_scaffold77G25297' => 'sas', 'SHI03889' => 'shi', 'SMO143G0190' => 'smo', 'SMO146G0261' => 'smo', 'SMO230G0059' => 'smo', 'SMO367G0186' => 'smo', 'Solyc01g103620.4' => 'sly', 'Solyc05g017950.3' => 'sly', 'Solyc08g007590.3' => 'sly', 'Solyc09g055940.3' => 'sly', 'Solyc10g038090.1' => 'sly', 'Solyc10g038100.1' => 'sly', 'Solyc12g005410.2' => 'sly', 'Sopen01g045990' => 'spe', 'Sopen01g046020' => 'spe', 'Sopen01g046030' => 'spe', 'Sopen05g014570' => 'spe', 'Sopen09g021810' => 'spe', 'Sopen12g001380' => 'spe', 'Sp3g22950' => 'spa', 'Sp4g21150' => 'spa', 'Sp5g33650' => 'spa', 'Sp6g05480' => 'spa', 'Sp7g09790' => 'spa', 'Sp7g20900' => 'spa', 'TAR184G0001' => 'tar', 'TAR375G0451' => 'tar', 'TAR625G0148' => 'tar', 'TAR628G1147' => 'tar', 'TAR629G1459' => 'tar', 'THA.LOC104808812' => 'tha', 'THA.LOC104812302' => 'tha', 'THA.LOC104814036' => 'tha', 'THA.LOC104815245' => 'tha', 'THA.LOC104826532' => 'tha', 'Thecc.01G210500' => 'tca', 'Thecc.02G019300' => 'tca', 'Thecc.03G264500' => 'tca', 'Thecc.07G135000' => 'tca', 'Thecc.09G117500' => 'tca', 'Thhalv10002537m.g' => 'esa', 'Thhalv10016729m.g' => 'esa', 'Thhalv10018656m.g' => 'esa', 'Thhalv10025337m.g' => 'esa', 'Thhalv10028698m.g' => 'esa', 'TPR.G11051' => 'tpr', 'TPR.G19569' => 'tpr', 'TPR.G26797' => 'tpr', 'TPR.G26829' => 'tpr', 'TPR.G35008' => 'tpr', 'TWI15G0455' => 'twi', 'TWI18G0798' => 'twi', 'TWI32G0927' => 'twi', 'TWI38G0474' => 'twi', 'TWI59G1092' => 'twi', 'unitig_0.g415' => 'ugi', 'unitig_21.g20529' => 'ugi', 'unitig_22.g5484' => 'ugi', 'unitig_22.g6855' => 'ugi', 'unitig_62.g23077' => 'ugi', 'vmacro00215' => 'vma', 'vmacro02819' => 'vma', 'vmacro09420' => 'vma', 'vmacro19866' => 'vma', 'vmacro20679' => 'vma', 'VMungo1080G0497' => 'vmu', 'VMungo1080G0956' => 'vmu', 'VMungo1215G0078' => 'vmu', 'VMungo1215G2965' => 'vmu', 'VMungo1215G3122' => 'vmu', 'VMungo1383G2670' => 'vmu', 'Zm00001eb043270' => 'zma', 'Zm00001eb139050' => 'zma', 'Zm00001eb318760' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000943' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000943' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000943' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000943' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000943', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '636', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A03p29530' => 'bna', 'A03p53820' => 'bna', 'A04p29590' => 'bna', 'A05p07410' => 'bna', 'A07p06990' => 'bna', 'A07p43810' => 'bna', 'A09p27090' => 'bna', 'Aa31LG4G2400' => 'aar', 'Aa31LG4G2410' => 'aar', 'Aa31LG5G8880' => 'aar', 'Aa31LG6G4700' => 'aar', 'Aa31LG6G4910' => 'aar', 'Aa31LG9G10450' => 'aar', 'Aa31sc38G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2793' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2927' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.489' => 'aag', 'Actinidia01604' => 'ach', 'Actinidia02071' => 'ach', 'Actinidia03621' => 'ach', 'Actinidia09395' => 'ach', 'Actinidia14485' => 'ach', 'Actinidia23356' => 'ach', 'Actinidia30013' => 'ach', 'Ah.02g116300' => 'amhyb', 'Ah.02g128290' => 'amhyb', 'Ah.04g163940' => 'amhyb', 'Ah.09g227470' => 'amhyb', 'Ah.11g050980' => 'amhyb', 'AL2G38960' => 'aly', 'AL3G41280' => 'aly', 'AL4G20130' => 'aly', 'AL6G46830' => 'aly', 'AL7G30670' => 'aly', 'Aqoxy1G01881' => 'aox', 'Aqoxy5G00043' => 'aox', 'Aqoxy7G00587' => 'aox', 'Aqoxy7G01922' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1K7GD6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1RUKD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AQV2BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AVJ0IE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BUF90N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DI6VX2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P2VAYP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4LTZI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WT9QCD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X0ENSR' => 'arhy', 'AT1G78560' => 'ath', 'AT2G26900' => 'ath', 'AT3G25410' => 'ath', 'AT4G12030' => 'ath', 'AT4G22840' => 'ath', 'ATR0083G040' => 'atr', 'ATR0584G051' => 'atr', 'ATR0609G010' => 'atr', 'ATR0757G175' => 'atr', 'ATR0763G119' => 'atr', 'ATR0810G012' => 'atr', 'Atru.chr6.3542' => 'acertr', 'Atru.chr6.800' => 'acertr', 'Atru.chr7.1273' => 'acertr', 'Atru.chr9.1474' => 'acertr', 'AUR62001469' => 'cqu', 'AUR62008117' => 'cqu', 'AUR62010537' => 'cqu', 'AUR62011044' => 'cqu', 'AUR62013941' => 'cqu', 'AUR62017358' => 'cqu', 'AUR62019668' => 'cqu', 'AUR62028695' => 'cqu', 'AUR62033421' => 'cqu', 'BcaB01g01709' => 'bca', 'BcaB01g02661' => 'bca', 'BcaB02g09151' => 'bca', 'BcaB06g26742' => 'bca', 'BcaC01g04609' => 'bca', 'BcaC02g07446' => 'bca', 'BcaC04g21192' => 'bca', 'BcaC06g35809' => 'bca', 'BcaC08g47434' => 'bca', 'BcaNung01667' => 'bca', 'BcaNung06079' => 'bca', 'BcaNung06080' => 'bca', 'BolC3t15884H' => 'bol', 'BolC4t22476H' => 'bol', 'BolC4t28190H' => 'bol', 'BolC6t40265H' => 'bol', 'BolC7t41527H' => 'bol', 'BolC7t45715H' => 'bol', 'BolC9t56287H' => 'bol', 'BraA03t12148Z' => 'bra', 'BraA03t14451Z' => 'bra', 'BraA03t14607Z' => 'bra', 'BraA03t14608Z' => 'bra', 'BraA03t14610Z' => 'bra', 'BraA03t14612Z' => 'bra', 'BraA04t18424Z' => 'bra', 'BraA05t19707Z' => 'bra', 'BraA07t28489Z' => 'bra', 'BraA07t31890Z' => 'bra', 'BraA09t38280Z' => 'bra', 'C03p35740' => 'bna', 'C04p08880' => 'bna', 'C04p66880' => 'bna', 'C06p52460' => 'bna', 'C07p10620' => 'bna', 'C07p52200' => 'bna', 'C07p52220' => 'bna', 'C09p34440' => 'bna', 'CAN.G1101.3' => 'can', 'CAN.G1237.30' => 'can', 'CAN.G1394.23' => 'can', 'CAN.G2125.2' => 'can', 'CAN.G284.3' => 'can', 'CANSAT01G3037' => 'cansat', 'CANSAT35G0243' => 'cansat', 'CANSAT56G1032' => 'cansat', 'CANSAT56G4068' => 'cansat', 'CARHR072050' => 'chi', 'CARHR101710' => 'chi', 'CARHR119060' => 'chi', 'CARHR229870' => 'chi', 'CARHR254200' => 'chi', 'Carub.0002s2541' => 'cru', 'Carub.0003s2572' => 'cru', 'Carub.0004s0740' => 'cru', 'Carub.0006s3113' => 'cru', 'Carub.0007s1843' => 'cru', 'Ca_03924_v3' => 'car', 'Ca_06680_v3' => 'car', 'Ca_06681_v3' => 'car', 'Ca_07480_v3' => 'car', 'Ca_21720_v3' => 'car', 'Ca_23716_v3' => 'car', 'Ca_26967_v3' => 'car', 'CBR_g40022' => 'cbr', 'CBR_g40023' => 'cbr', 'Cc01_g16100' => 'ccan', 'Cc02_g23100' => 'ccan', 'Cc05_g10620' => 'ccan', 'Cc06_g09180' => 'ccan', 'Cc08_g13510' => 'ccan', 'CDE01G0021' => 'cde', 'CDE05G1302' => 'cde', 'CDE05G2171' => 'cde', 'CDE06G0292' => 'cde', 'CDE06G2531' => 'cde', 'CDE07G0438' => 'cde', 'CDE11G0956' => 'cde', 'Cfa003304' => 'cfa', 'Cfa004493' => 'cfa', 'Cfa010672' => 'cfa', 'Cfa012043' => 'cfa', 'Ciclev10001198m.g' => 'ccl', 'Ciclev10008416m.g' => 'ccl', 'Ciclev10015435m.g' => 'ccl', 'Ciclev10020318m.g' => 'ccl', 'Ciclev10020346m.g' => 'ccl', 'CiPaw.03G236900' => 'cil', 'CiPaw.05G005300' => 'cil', 'CiPaw.11G145100' => 'cil', 'CiPaw.12G110000' => 'cil', 'CiPaw.13G057400' => 'cil', 'ClCG00G000060' => 'cla', 'ClCG06G010520' => 'cla', 'ClCG09G008190' => 'cla', 'ClCG10G003310' => 'cla', 'ClCG10G007030' => 'cla', 'ClCG10G007050' => 'cla', 'ClCG11G017120' => 'cla', 'COL.COLO4_03605' => 'col', 'COL.COLO4_17731' => 'col', 'COL.COLO4_23836' => 'col', 'COL.COLO4_26566' => 'col', 'COL.COLO4_34960' => 'col', 'Cpa.g.sc113.50' => 'cpa', 'Cpa.g.sc1720.1' => 'cpa', 'Cpa.g.sc29.61' => 'cpa', 'Cpa.g.sc682.5' => 'cpa', 'Cpa.g.sc8.67' => 'cpa', 'Cre10.g448350' => 'cre', 'Cre12.g532500' => 'cre', 'Cre17.g725650' => 'cre', 'CsaV3_1G030990' => 'csa', 'CsaV3_3G003330' => 'csa', 'CsaV3_3G006360' => 'csa', 'CsaV3_3G006370' => 'csa', 'CsaV3_4G032780' => 'csa', 'CsaV3_7G026860' => 'csa', 'CSS0004534' => 'camsi', 'CSS0008690' => 'camsi', 'CSS0009276' => 'camsi', 'CSS0010557' => 'camsi', 'CSS0023217' => 'camsi', 'CSS0024707' => 'camsi', 'CSS0026808' => 'camsi', 'CSS0030160' => 'camsi', 'CSS0044087' => 'camsi', 'CSS0045366' => 'camsi', 'DCAR_006674' => 'dca', 'DCAR_006793' => 'dca', 'DCAR_012694' => 'dca', 'DCAR_017587' => 'dca', 'DCAR_020847' => 'dca', 'Dinv10444' => 'din', 'Dinv19403' => 'din', 'Dinv26700' => 'din', 'Dinv28808' => 'din', 'Dinv36591' => 'din', 'Dinv37739' => 'din', 'Dinv39055' => 'din', 'Dinv41560' => 'din', 'Duzib084G1296' => 'dzi', 'Duzib132G0520' => 'dzi', 'Duzib138G0240' => 'dzi', 'Duzib150G0624' => 'dzi', 'Duzib187G0454' => 'dzi', 'Duzib187G1914' => 'dzi', 'Duzib205G1220' => 'dzi', 'Duzib211G0104' => 'dzi', 'ECA234G0075' => 'eca', 'ECA234G0636' => 'eca', 'ECA240G1417' => 'eca', 'ECA240G3303' => 'eca', 'ECA247G1772' => 'eca', 'EL10Ac4g08437' => 'bvu', 'EL10Ac4g08445' => 'bvu', 'EL10Ac5g10622' => 'bvu', 'EL10Ac5g12655' => 'bvu', 'EL10Ac8g18562' => 'bvu', 'Eucgr.C01098' => 'egr', 'Eucgr.E00493' => 'egr', 'Eucgr.E00495' => 'egr', 'Eucgr.E00496' => 'egr', 'Eucgr.F03227' => 'egr', 'Eucgr.K02087' => 'egr', 'FAN04G0330' => 'fan', 'FAN08G1877' => 'fan', 'FAN11G0107' => 'fan', 'FAN13G3095' => 'fan', 'FAN15G3350' => 'fan', 'FAN16G1964' => 'fan', 'FAN18G1821' => 'fan', 'FAN19G2692' => 'fan', 'FAN21G2606' => 'fan', 'FAN24G2729' => 'fan', 'FAN25G0219' => 'fan', 'FAN26G1677' => 'fan', 'FAN27G0924' => 'fan', 'FAN27G2532' => 'fan', 'FAN28G0154' => 'fan', 'FvH4_1g04160' => 'fve', 'FvH4_2g17730' => 'fve', 'FvH4_3g17590' => 'fve', 'FvH4_5g00950' => 'fve', 'Glyma.01G213400' => 'gma', 'Glyma.03G041400' => 'gma', 'Glyma.05G011700' => 'gma', 'Glyma.08G344000' => 'gma', 'Glyma.11G028500' => 'gma', 'Glyma.12G234600' => 'gma', 'Glyma.13G264300' => 'gma', 'Glyma.17G119900' => 'gma', 'Gohir.A01G046900' => 'ghi', 'Gohir.A04G133050' => 'ghi', 'Gohir.A04G133500' => 'ghi', 'Gohir.A06G059400' => 'ghi', 'Gohir.A07G196600' => 'ghi', 'Gohir.A08G048000' => 'ghi', 'Gohir.A12G222600' => 'ghi', 'Gohir.A13G197200' => 'ghi', 'Gohir.D01G037600' => 'ghi', 'Gohir.D04G176600' => 'ghi', 'Gohir.D06G057600' => 'ghi', 'Gohir.D07G202900' => 'ghi', 'Gohir.D07G203000' => 'ghi', 'Gohir.D08G058100' => 'ghi', 'Gohir.D12G225100' => 'ghi', 'Gohir.D13G202500' => 'ghi', 'Gohir.D13G202650' => 'ghi', 'Gorai.001G228400' => 'gra', 'Gorai.002G045800' => 'gra', 'Gorai.003G059400' => 'gra', 'Gorai.004G059400' => 'gra', 'Gorai.004G059600' => 'gra', 'Gorai.004G059800' => 'gra', 'Gorai.004G060000' => 'gra', 'Gorai.008G241200' => 'gra', 'Gorai.010G067700' => 'gra', 'Gorai.011G136100' => 'gra', 'Gorai.012G168600' => 'gra', 'Gorai.012G169500' => 'gra', 'Gorai.013G231400' => 'gra', 'Gorai.013G231700' => 'gra', 'GSVIVG01003813001' => 'vvi', 'GSVIVG01014084001' => 'vvi', 'GSVIVG01014085001' => 'vvi', 'GSVIVG01015459001' => 'vvi', 'GSVIVG01023255001' => 'vvi', 'HanXRQChr01g0027191' => 'han', 'HanXRQChr03g0087371' => 'han', 'HanXRQChr07g0193281' => 'han', 'HanXRQChr08g0226421' => 'han', 'HanXRQChr08g0231881' => 'han', 'HanXRQChr09g0238611' => 'han', 'HanXRQChr09g0243901' => 'han', 'HanXRQChr10g0305601' => 'han', 'HanXRQChr12g0382021' => 'han', 'HanXRQChr13g0393571' => 'han', 'HanXRQChr13g0417211' => 'han', 'HanXRQChr13g0422401' => 'han', 'Haze_03598' => 'cav', 'Haze_08446' => 'cav', 'Haze_09024' => 'cav', 'Haze_09029' => 'cav', 'Haze_09034' => 'cav', 'Haze_10048' => 'cav', 'Haze_25657' => 'cav', 'Hma1.2p1_0018F.1_g013040' => 'hma', 'Hma1.2p1_0138F.1_g062960' => 'hma', 'Hma1.2p1_0161F.1_g071415' => 'hma', 'Hma1.2p1_2174F.1_g316050' => 'hma', 'HPP92_001547' => 'vpl', 'HPP92_008099' => 'vpl', 'HPP92_011385' => 'vpl', 'HPP92_018428' => 'vpl', 'HPP92_021804' => 'vpl', 'Hund09168' => 'sun', 'Hund09470' => 'sun', 'Hund10402' => 'sun', 'Hund14677' => 'sun', 'Hund15466' => 'sun', 'Lalb_Chr01g0016271' => 'lal', 'Lalb_Chr07g0178681' => 'lal', 'Lalb_Chr09g0324591' => 'lal', 'Lalb_Chr12g0197651' => 'lal', 'Lalb_Chr19g0126141' => 'lal', 'Lj1A101G44' => 'lonja', 'Lj1A822T51' => 'lonja', 'Lj1g0017934' => 'lja', 'Lj2C204T5' => 'lonja', 'Lj2g0012794' => 'lja', 'Lj2g0023300' => 'lja', 'Lj3g0014038' => 'lja', 'Lj4g0024728' => 'lja', 'Lj5A262G66' => 'lonja', 'Lj7A638T62' => 'lonja', 'Lsat_1_v5_gn_5_126301' => 'lsa', 'Lsat_1_v5_gn_6_88660' => 'lsa', 'Lsat_1_v5_gn_6_88680' => 'lsa', 'Lsat_1_v5_gn_6_88700' => 'lsa', 'Lsat_1_v5_gn_6_88720' => 'lsa', 'Lsat_1_v5_gn_9_120381' => 'lsa', 'Lsat_1_v5_gn_9_16381' => 'lsa', 'Manes.01G071200' => 'mes', 'Manes.03G078100' => 'mes', 'Manes.07G023600' => 'mes', 'Manes.10G118900' => 'mes', 'Manes.13G054700' => 'mes', 'Manes.16G063700' => 'mes', 'Mapoly0002s0291' => 'mpo', 'Mapoly0020s0121' => 'mpo', 'Mapoly0030s0051' => 'mpo', 'Mapoly0050s0070' => 'mpo', 'MBI01_g03565_MAGBIO' => 'mbi', 'MBI01_g45790_MAGBIO' => 'mbi', 'MBI02_g32395_MAGBIO' => 'mbi', 'MBI02_g32396_MAGBIO' => 'mbi', 'MBI04_g32263_MAGBIO' => 'mbi', 'MBI07_g00629_MAGBIO' => 'mbi', 'MBI09_g28076_MAGBIO' => 'mbi', 'MBI17_g42497_MAGBIO' => 'mbi', 'MCO09G631' => 'mco', 'MCO14G078' => 'mco', 'MD02G1040100' => 'mdo', 'MD03G1250900' => 'mdo', 'MD03G1251000' => 'mdo', 'MD03G1251100' => 'mdo', 'MD03G1251200' => 'mdo', 'MD04G1070000' => 'mdo', 'MD04G1070100' => 'mdo', 'MD04G1076800' => 'mdo', 'MD05G1158500' => 'mdo', 'MD10G1052000' => 'mdo', 'MD10G1151500' => 'mdo', 'MD11G1271200' => 'mdo', 'MD11G1271700' => 'mdo', 'MD11G1271800' => 'mdo', 'MD15G1145000' => 'mdo', 'Medtr2g073070' => 'mtr', 'Medtr2g073080' => 'mtr', 'Medtr2g073190' => 'mtr', 'Medtr2g078500' => 'mtr', 'Medtr4g113090' => 'mtr', 'Medtr5g011440' => 'mtr', 'Medtr5g011450' => 'mtr', 'Medtr7g053090' => 'mtr', 'MELO3C012726.2' => 'cme', 'MELO3C014000.2' => 'cme', 'MELO3C016503.2' => 'cme', 'MELO3C016505.2' => 'cme', 'MELO3C025304.2' => 'cme', 'MELO3C025675.2' => 'cme', 'MELO3C029124.2' => 'cme', 'Migut.A00837' => 'egut', 'Migut.A00874' => 'egut', 'Migut.M00688' => 'egut', 'Migut.N00666' => 'egut', 'Migut.N00828' => 'egut', 'MSTRG.12040' => 'ama', 'MSTRG.12057' => 'ama', 'MSTRG.14988' => 'ama', 'MSTRG.17970' => 'ama', 'MSTRG.25550' => 'ama', 'Nitab4.5_0000038g0160' => 'nta', 'Nitab4.5_0000092g0190' => 'nta', 'Nitab4.5_0000092g0330' => 'nta', 'Nitab4.5_0000432g0050' => 'nta', 'Nitab4.5_0000667g0060' => 'nta', 'Nitab4.5_0000787g0260' => 'nta', 'Nitab4.5_0001265g0140' => 'nta', 'Nitab4.5_0001386g0010' => 'nta', 'Nitab4.5_0001816g0080' => 'nta', 'Nitab4.5_0002550g0030' => 'nta', 'Nitab4.5_0004516g0020' => 'nta', 'Nitab4.5_0005122g0030' => 'nta', 'Nitab4.5_0005122g0040' => 'nta', 'Nitab4.5_0007295g0040' => 'nta', 'Nn1g01188' => 'nnu', 'Nn1g08270' => 'nnu', 'Nn2g10341' => 'nnu', 'Nn2g11861' => 'nnu', 'Nn3g20955' => 'nnu', 'Nn8g39317' => 'nnu', 'Nn8g40352' => 'nnu', 'Oeu010037.1' => 'oeu', 'Oeu010038.1' => 'oeu', 'Oeu018253.4' => 'oeu', 'Oeu048663.1' => 'oeu', 'Oeu049584.1' => 'oeu', 'Oeu049585.1' => 'oeu', 'Oeu049813.3' => 'oeu', 'Oeu057828.1' => 'oeu', 'Oeu064607.2' => 'oeu', 'Os01g0645200' => 'osa', 'Os02g0475400' => 'osa', 'Os04g0381100' => 'osa', 'Os09g0520600' => 'osa', 'Os12g0170300' => 'osa', 'Peaxi162Scf00000g76016' => 'pax', 'Peaxi162Scf00011g01123' => 'pax', 'Peaxi162Scf00044g01817' => 'pax', 'Peaxi162Scf00044g01826' => 'pax', 'Peaxi162Scf00047g02459' => 'pax', 'Peaxi162Scf00047g02462' => 'pax', 'Peaxi162Scf00102g01356' => 'pax', 'Peaxi162Scf00225g00623' => 'pax', 'Peaxi162Scf00335g00069' => 'pax', 'Peaxi162Scf02228g00005' => 'pax', 'PGR031G3430' => 'pgr', 'PGR042G3659' => 'pgr', 'PGR142G1561' => 'pgr', 'PGR142G1792' => 'pgr', 'PGSC0003DMG400001256' => 'stu', 'PGSC0003DMG400012516' => 'stu', 'PGSC0003DMG400019027' => 'stu', 'PGSC0003DMG400028882' => 'stu', 'Phvul.002G151900' => 'pvu', 'Phvul.003G159600' => 'pvu', 'Phvul.005G076100' => 'pvu', 'Phvul.005G078101' => 'pvu', 'Phvul.008G136700' => 'pvu', 'Potri.003G008700' => 'ptr', 'Potri.003G117300' => 'ptr', 'Potri.011G103200' => 'ptr', 'Potri.014G178000' => 'ptr', 'Potri.017G069350' => 'ptr', 'Potri.018G074400' => 'ptr', 'Pp3c14_2960' => 'ppa', 'Pp3c18_12460' => 'ppa', 'Pp3c20_2280' => 'ppa', 'Pp3c23_17660' => 'ppa', 'Pp3c5_7360' => 'ppa', 'Pp3c6_18611' => 'ppa', 'Pp3c6_19720' => 'ppa', 'Pp3c7_7830' => 'ppa', 'PRCOL_00000738' => 'pco', 'PRCOL_00003803' => 'pco', 'PRCOL_00004648' => 'pco', 'Prupe.1G578600' => 'ppe', 'Prupe.4G155400' => 'ppe', 'Prupe.4G251800' => 'ppe', 'Prupe.5G082600' => 'ppe', 'Prupe.5G099300' => 'ppe', 'Prupe.6G004300' => 'ppe', 'Prupe.7G235600' => 'ppe', 'Prupe.8G189900' => 'ppe', 'Psat0s3891g0080' => 'psa', 'Psat0s944g0200' => 'psa', 'Psat1g007560' => 'psa', 'Psat1g007600' => 'psa', 'Psat2g180440' => 'psa', 'Psat2g180480' => 'psa', 'PSO017G6369' => 'pso', 'PSO170G2819' => 'pso', 'PSO170G3630' => 'pso', 'PSO357G0694' => 'pso', 'PSO478G2124' => 'pso', 'PSO541G4101' => 'pso', 'PSO675G4586' => 'pso', 'PSO675G8358' => 'pso', 'PSO782G0848' => 'pso', 'QL02p086503' => 'qlo', 'QL02p100337' => 'qlo', 'QL09p046703' => 'qlo', 'QL12p015803' => 'qlo', 'QL93p0263_0060' => 'qlo', 'RcHm_v2.0_Chr1g0359741' => 'rch', 'RcHm_v2.0_Chr2g0089661' => 'rch', 'RcHm_v2.0_Chr5g0029301' => 'rch', 'RcHm_v2.0_Chr6g0282761' => 'rch', 'RcHm_v2.0_Chr6g0282771' => 'rch', 'RcHm_v2.0_Chr7g0200441' => 'rch', 'Rhsim01G0089900' => 'rsi', 'Rhsim04G0110500' => 'rsi', 'Rhsim05G0172400' => 'rsi', 'Rhsim13G0053000' => 'rsi', 'RhsimUnG0206100' => 'rsi', 'Sabra03G0004300' => 'sbr', 'Sabra03G0081700' => 'sbr', 'Sabra11G0077500' => 'sbr', 'Sabra11G0082400' => 'sbr', 'Sabra14G0136100' => 'sbr', 'Sabra18G0063400' => 'sbr', 'SalBow3G1699' => 'sbo', 'SalBow3G4188' => 'sbo', 'SalBow6G4468' => 'sbo', 'SalBow6G6325' => 'sbo', 'SalBow8G5603' => 'sbo', 'Sc01g0009070' => 'sci', 'Sc05g0001740' => 'sci', 'Sc07g0005160' => 'sci', 'Sc16g0007780' => 'sci', 'Sc18g0000940' => 'sci', 'Sed0007276' => 'sed', 'Sed0008675' => 'sed', 'Sed0011001' => 'sed', 'Sed0014303' => 'sed', 'Sed0016281' => 'sed', 'Sed0019845' => 'sed', 'SEGI_02510' => 'sgi', 'SEGI_05556' => 'sgi', 'SEGI_13894' => 'sgi', 'SEGI_19861' => 'sgi', 'SEGI_39487' => 'sgi', 'SGA_v2.0_scaffold120G32811' => 'sas', 'SGA_v2.0_scaffold37G14858' => 'sas', 'SGA_v2.0_scaffold42G15906' => 'sas', 'SGA_v2.0_scaffold73G24378' => 'sas', 'SGA_v2.0_scaffold77G25297' => 'sas', 'SHI03889' => 'shi', 'SMO143G0190' => 'smo', 'SMO146G0261' => 'smo', 'SMO230G0059' => 'smo', 'SMO367G0186' => 'smo', 'Solyc01g103620.4' => 'sly', 'Solyc05g017950.3' => 'sly', 'Solyc08g007590.3' => 'sly', 'Solyc09g055940.3' => 'sly', 'Solyc10g038090.1' => 'sly', 'Solyc10g038100.1' => 'sly', 'Solyc12g005410.2' => 'sly', 'Sopen01g045990' => 'spe', 'Sopen01g046020' => 'spe', 'Sopen01g046030' => 'spe', 'Sopen05g014570' => 'spe', 'Sopen09g021810' => 'spe', 'Sopen12g001380' => 'spe', 'Sp3g22950' => 'spa', 'Sp4g21150' => 'spa', 'Sp5g33650' => 'spa', 'Sp6g05480' => 'spa', 'Sp7g09790' => 'spa', 'Sp7g20900' => 'spa', 'TAR184G0001' => 'tar', 'TAR375G0451' => 'tar', 'TAR625G0148' => 'tar', 'TAR628G1147' => 'tar', 'TAR629G1459' => 'tar', 'THA.LOC104808812' => 'tha', 'THA.LOC104812302' => 'tha', 'THA.LOC104814036' => 'tha', 'THA.LOC104815245' => 'tha', 'THA.LOC104826532' => 'tha', 'Thecc.01G210500' => 'tca', 'Thecc.02G019300' => 'tca', 'Thecc.03G264500' => 'tca', 'Thecc.07G135000' => 'tca', 'Thecc.09G117500' => 'tca', 'Thhalv10002537m.g' => 'esa', 'Thhalv10016729m.g' => 'esa', 'Thhalv10018656m.g' => 'esa', 'Thhalv10025337m.g' => 'esa', 'Thhalv10028698m.g' => 'esa', 'TPR.G11051' => 'tpr', 'TPR.G19569' => 'tpr', 'TPR.G26797' => 'tpr', 'TPR.G26829' => 'tpr', 'TPR.G35008' => 'tpr', 'TWI15G0455' => 'twi', 'TWI18G0798' => 'twi', 'TWI32G0927' => 'twi', 'TWI38G0474' => 'twi', 'TWI59G1092' => 'twi', 'unitig_0.g415' => 'ugi', 'unitig_21.g20529' => 'ugi', 'unitig_22.g5484' => 'ugi', 'unitig_22.g6855' => 'ugi', 'unitig_62.g23077' => 'ugi', 'vmacro00215' => 'vma', 'vmacro02819' => 'vma', 'vmacro09420' => 'vma', 'vmacro19866' => 'vma', 'vmacro20679' => 'vma', 'VMungo1080G0497' => 'vmu', 'VMungo1080G0956' => 'vmu', 'VMungo1215G0078' => 'vmu', 'VMungo1215G2965' => 'vmu', 'VMungo1215G3122' => 'vmu', 'VMungo1383G2670' => 'vmu', 'Zm00001eb043270' => 'zma', 'Zm00001eb139050' => 'zma', 'Zm00001eb318760' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000943', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000943' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000943', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '636', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000943' ) ), 'genes' => array( 'A03p29530' => 'bna', 'A03p53820' => 'bna', 'A04p29590' => 'bna', 'A05p07410' => 'bna', 'A07p06990' => 'bna', 'A07p43810' => 'bna', 'A09p27090' => 'bna', 'Aa31LG4G2400' => 'aar', 'Aa31LG4G2410' => 'aar', 'Aa31LG5G8880' => 'aar', 'Aa31LG6G4700' => 'aar', 'Aa31LG6G4910' => 'aar', 'Aa31LG9G10450' => 'aar', 'Aa31sc38G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2793' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2927' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.489' => 'aag', 'Actinidia01604' => 'ach', 'Actinidia02071' => 'ach', 'Actinidia03621' => 'ach', 'Actinidia09395' => 'ach', 'Actinidia14485' => 'ach', 'Actinidia23356' => 'ach', 'Actinidia30013' => 'ach', 'Ah.02g116300' => 'amhyb', 'Ah.02g128290' => 'amhyb', 'Ah.04g163940' => 'amhyb', 'Ah.09g227470' => 'amhyb', 'Ah.11g050980' => 'amhyb', 'AL2G38960' => 'aly', 'AL3G41280' => 'aly', 'AL4G20130' => 'aly', 'AL6G46830' => 'aly', 'AL7G30670' => 'aly', 'Aqoxy1G01881' => 'aox', 'Aqoxy5G00043' => 'aox', 'Aqoxy7G00587' => 'aox', 'Aqoxy7G01922' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1K7GD6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1RUKD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AQV2BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AVJ0IE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BUF90N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DI6VX2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P2VAYP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4LTZI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WT9QCD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X0ENSR' => 'arhy', 'AT1G78560' => 'ath', 'AT2G26900' => 'ath', 'AT3G25410' => 'ath', 'AT4G12030' => 'ath', 'AT4G22840' => 'ath', 'ATR0083G040' => 'atr', 'ATR0584G051' => 'atr', 'ATR0609G010' => 'atr', 'ATR0757G175' => 'atr', 'ATR0763G119' => 'atr', 'ATR0810G012' => 'atr', 'Atru.chr6.3542' => 'acertr', 'Atru.chr6.800' => 'acertr', 'Atru.chr7.1273' => 'acertr', 'Atru.chr9.1474' => 'acertr', 'AUR62001469' => 'cqu', 'AUR62008117' => 'cqu', 'AUR62010537' => 'cqu', 'AUR62011044' => 'cqu', 'AUR62013941' => 'cqu', 'AUR62017358' => 'cqu', 'AUR62019668' => 'cqu', 'AUR62028695' => 'cqu', 'AUR62033421' => 'cqu', 'BcaB01g01709' => 'bca', 'BcaB01g02661' => 'bca', 'BcaB02g09151' => 'bca', 'BcaB06g26742' => 'bca', 'BcaC01g04609' => 'bca', 'BcaC02g07446' => 'bca', 'BcaC04g21192' => 'bca', 'BcaC06g35809' => 'bca', 'BcaC08g47434' => 'bca', 'BcaNung01667' => 'bca', 'BcaNung06079' => 'bca', 'BcaNung06080' => 'bca', 'BolC3t15884H' => 'bol', 'BolC4t22476H' => 'bol', 'BolC4t28190H' => 'bol', 'BolC6t40265H' => 'bol', 'BolC7t41527H' => 'bol', 'BolC7t45715H' => 'bol', 'BolC9t56287H' => 'bol', 'BraA03t12148Z' => 'bra', 'BraA03t14451Z' => 'bra', 'BraA03t14607Z' => 'bra', 'BraA03t14608Z' => 'bra', 'BraA03t14610Z' => 'bra', 'BraA03t14612Z' => 'bra', 'BraA04t18424Z' => 'bra', 'BraA05t19707Z' => 'bra', 'BraA07t28489Z' => 'bra', 'BraA07t31890Z' => 'bra', 'BraA09t38280Z' => 'bra', 'C03p35740' => 'bna', 'C04p08880' => 'bna', 'C04p66880' => 'bna', 'C06p52460' => 'bna', 'C07p10620' => 'bna', 'C07p52200' => 'bna', 'C07p52220' => 'bna', 'C09p34440' => 'bna', 'CAN.G1101.3' => 'can', 'CAN.G1237.30' => 'can', 'CAN.G1394.23' => 'can', 'CAN.G2125.2' => 'can', 'CAN.G284.3' => 'can', 'CANSAT01G3037' => 'cansat', 'CANSAT35G0243' => 'cansat', 'CANSAT56G1032' => 'cansat', 'CANSAT56G4068' => 'cansat', 'CARHR072050' => 'chi', 'CARHR101710' => 'chi', 'CARHR119060' => 'chi', 'CARHR229870' => 'chi', 'CARHR254200' => 'chi', 'Carub.0002s2541' => 'cru', 'Carub.0003s2572' => 'cru', 'Carub.0004s0740' => 'cru', 'Carub.0006s3113' => 'cru', 'Carub.0007s1843' => 'cru', 'Ca_03924_v3' => 'car', 'Ca_06680_v3' => 'car', 'Ca_06681_v3' => 'car', 'Ca_07480_v3' => 'car', 'Ca_21720_v3' => 'car', 'Ca_23716_v3' => 'car', 'Ca_26967_v3' => 'car', 'CBR_g40022' => 'cbr', 'CBR_g40023' => 'cbr', 'Cc01_g16100' => 'ccan', 'Cc02_g23100' => 'ccan', 'Cc05_g10620' => 'ccan', 'Cc06_g09180' => 'ccan', 'Cc08_g13510' => 'ccan', 'CDE01G0021' => 'cde', 'CDE05G1302' => 'cde', 'CDE05G2171' => 'cde', 'CDE06G0292' => 'cde', 'CDE06G2531' => 'cde', 'CDE07G0438' => 'cde', 'CDE11G0956' => 'cde', 'Cfa003304' => 'cfa', 'Cfa004493' => 'cfa', 'Cfa010672' => 'cfa', 'Cfa012043' => 'cfa', 'Ciclev10001198m.g' => 'ccl', 'Ciclev10008416m.g' => 'ccl', 'Ciclev10015435m.g' => 'ccl', 'Ciclev10020318m.g' => 'ccl', 'Ciclev10020346m.g' => 'ccl', 'CiPaw.03G236900' => 'cil', 'CiPaw.05G005300' => 'cil', 'CiPaw.11G145100' => 'cil', 'CiPaw.12G110000' => 'cil', 'CiPaw.13G057400' => 'cil', 'ClCG00G000060' => 'cla', 'ClCG06G010520' => 'cla', 'ClCG09G008190' => 'cla', 'ClCG10G003310' => 'cla', 'ClCG10G007030' => 'cla', 'ClCG10G007050' => 'cla', 'ClCG11G017120' => 'cla', 'COL.COLO4_03605' => 'col', 'COL.COLO4_17731' => 'col', 'COL.COLO4_23836' => 'col', 'COL.COLO4_26566' => 'col', 'COL.COLO4_34960' => 'col', 'Cpa.g.sc113.50' => 'cpa', 'Cpa.g.sc1720.1' => 'cpa', 'Cpa.g.sc29.61' => 'cpa', 'Cpa.g.sc682.5' => 'cpa', 'Cpa.g.sc8.67' => 'cpa', 'Cre10.g448350' => 'cre', 'Cre12.g532500' => 'cre', 'Cre17.g725650' => 'cre', 'CsaV3_1G030990' => 'csa', 'CsaV3_3G003330' => 'csa', 'CsaV3_3G006360' => 'csa', 'CsaV3_3G006370' => 'csa', 'CsaV3_4G032780' => 'csa', 'CsaV3_7G026860' => 'csa', 'CSS0004534' => 'camsi', 'CSS0008690' => 'camsi', 'CSS0009276' => 'camsi', 'CSS0010557' => 'camsi', 'CSS0023217' => 'camsi', 'CSS0024707' => 'camsi', 'CSS0026808' => 'camsi', 'CSS0030160' => 'camsi', 'CSS0044087' => 'camsi', 'CSS0045366' => 'camsi', 'DCAR_006674' => 'dca', 'DCAR_006793' => 'dca', 'DCAR_012694' => 'dca', 'DCAR_017587' => 'dca', 'DCAR_020847' => 'dca', 'Dinv10444' => 'din', 'Dinv19403' => 'din', 'Dinv26700' => 'din', 'Dinv28808' => 'din', 'Dinv36591' => 'din', 'Dinv37739' => 'din', 'Dinv39055' => 'din', 'Dinv41560' => 'din', 'Duzib084G1296' => 'dzi', 'Duzib132G0520' => 'dzi', 'Duzib138G0240' => 'dzi', 'Duzib150G0624' => 'dzi', 'Duzib187G0454' => 'dzi', 'Duzib187G1914' => 'dzi', 'Duzib205G1220' => 'dzi', 'Duzib211G0104' => 'dzi', 'ECA234G0075' => 'eca', 'ECA234G0636' => 'eca', 'ECA240G1417' => 'eca', 'ECA240G3303' => 'eca', 'ECA247G1772' => 'eca', 'EL10Ac4g08437' => 'bvu', 'EL10Ac4g08445' => 'bvu', 'EL10Ac5g10622' => 'bvu', 'EL10Ac5g12655' => 'bvu', 'EL10Ac8g18562' => 'bvu', 'Eucgr.C01098' => 'egr', 'Eucgr.E00493' => 'egr', 'Eucgr.E00495' => 'egr', 'Eucgr.E00496' => 'egr', 'Eucgr.F03227' => 'egr', 'Eucgr.K02087' => 'egr', 'FAN04G0330' => 'fan', 'FAN08G1877' => 'fan', 'FAN11G0107' => 'fan', 'FAN13G3095' => 'fan', 'FAN15G3350' => 'fan', 'FAN16G1964' => 'fan', 'FAN18G1821' => 'fan', 'FAN19G2692' => 'fan', 'FAN21G2606' => 'fan', 'FAN24G2729' => 'fan', 'FAN25G0219' => 'fan', 'FAN26G1677' => 'fan', 'FAN27G0924' => 'fan', 'FAN27G2532' => 'fan', 'FAN28G0154' => 'fan', 'FvH4_1g04160' => 'fve', 'FvH4_2g17730' => 'fve', 'FvH4_3g17590' => 'fve', 'FvH4_5g00950' => 'fve', 'Glyma.01G213400' => 'gma', 'Glyma.03G041400' => 'gma', 'Glyma.05G011700' => 'gma', 'Glyma.08G344000' => 'gma', 'Glyma.11G028500' => 'gma', 'Glyma.12G234600' => 'gma', 'Glyma.13G264300' => 'gma', 'Glyma.17G119900' => 'gma', 'Gohir.A01G046900' => 'ghi', 'Gohir.A04G133050' => 'ghi', 'Gohir.A04G133500' => 'ghi', 'Gohir.A06G059400' => 'ghi', 'Gohir.A07G196600' => 'ghi', 'Gohir.A08G048000' => 'ghi', 'Gohir.A12G222600' => 'ghi', 'Gohir.A13G197200' => 'ghi', 'Gohir.D01G037600' => 'ghi', 'Gohir.D04G176600' => 'ghi', 'Gohir.D06G057600' => 'ghi', 'Gohir.D07G202900' => 'ghi', 'Gohir.D07G203000' => 'ghi', 'Gohir.D08G058100' => 'ghi', 'Gohir.D12G225100' => 'ghi', 'Gohir.D13G202500' => 'ghi', 'Gohir.D13G202650' => 'ghi', 'Gorai.001G228400' => 'gra', 'Gorai.002G045800' => 'gra', 'Gorai.003G059400' => 'gra', 'Gorai.004G059400' => 'gra', 'Gorai.004G059600' => 'gra', 'Gorai.004G059800' => 'gra', 'Gorai.004G060000' => 'gra', 'Gorai.008G241200' => 'gra', 'Gorai.010G067700' => 'gra', 'Gorai.011G136100' => 'gra', 'Gorai.012G168600' => 'gra', 'Gorai.012G169500' => 'gra', 'Gorai.013G231400' => 'gra', 'Gorai.013G231700' => 'gra', 'GSVIVG01003813001' => 'vvi', 'GSVIVG01014084001' => 'vvi', 'GSVIVG01014085001' => 'vvi', 'GSVIVG01015459001' => 'vvi', 'GSVIVG01023255001' => 'vvi', 'HanXRQChr01g0027191' => 'han', 'HanXRQChr03g0087371' => 'han', 'HanXRQChr07g0193281' => 'han', 'HanXRQChr08g0226421' => 'han', 'HanXRQChr08g0231881' => 'han', 'HanXRQChr09g0238611' => 'han', 'HanXRQChr09g0243901' => 'han', 'HanXRQChr10g0305601' => 'han', 'HanXRQChr12g0382021' => 'han', 'HanXRQChr13g0393571' => 'han', 'HanXRQChr13g0417211' => 'han', 'HanXRQChr13g0422401' => 'han', 'Haze_03598' => 'cav', 'Haze_08446' => 'cav', 'Haze_09024' => 'cav', 'Haze_09029' => 'cav', 'Haze_09034' => 'cav', 'Haze_10048' => 'cav', 'Haze_25657' => 'cav', 'Hma1.2p1_0018F.1_g013040' => 'hma', 'Hma1.2p1_0138F.1_g062960' => 'hma', 'Hma1.2p1_0161F.1_g071415' => 'hma', 'Hma1.2p1_2174F.1_g316050' => 'hma', 'HPP92_001547' => 'vpl', 'HPP92_008099' => 'vpl', 'HPP92_011385' => 'vpl', 'HPP92_018428' => 'vpl', 'HPP92_021804' => 'vpl', 'Hund09168' => 'sun', 'Hund09470' => 'sun', 'Hund10402' => 'sun', 'Hund14677' => 'sun', 'Hund15466' => 'sun', 'Lalb_Chr01g0016271' => 'lal', 'Lalb_Chr07g0178681' => 'lal', 'Lalb_Chr09g0324591' => 'lal', 'Lalb_Chr12g0197651' => 'lal', 'Lalb_Chr19g0126141' => 'lal', 'Lj1A101G44' => 'lonja', 'Lj1A822T51' => 'lonja', 'Lj1g0017934' => 'lja', 'Lj2C204T5' => 'lonja', 'Lj2g0012794' => 'lja', 'Lj2g0023300' => 'lja', 'Lj3g0014038' => 'lja', 'Lj4g0024728' => 'lja', 'Lj5A262G66' => 'lonja', 'Lj7A638T62' => 'lonja', 'Lsat_1_v5_gn_5_126301' => 'lsa', 'Lsat_1_v5_gn_6_88660' => 'lsa', 'Lsat_1_v5_gn_6_88680' => 'lsa', 'Lsat_1_v5_gn_6_88700' => 'lsa', 'Lsat_1_v5_gn_6_88720' => 'lsa', 'Lsat_1_v5_gn_9_120381' => 'lsa', 'Lsat_1_v5_gn_9_16381' => 'lsa', 'Manes.01G071200' => 'mes', 'Manes.03G078100' => 'mes', 'Manes.07G023600' => 'mes', 'Manes.10G118900' => 'mes', 'Manes.13G054700' => 'mes', 'Manes.16G063700' => 'mes', 'Mapoly0002s0291' => 'mpo', 'Mapoly0020s0121' => 'mpo', 'Mapoly0030s0051' => 'mpo', 'Mapoly0050s0070' => 'mpo', 'MBI01_g03565_MAGBIO' => 'mbi', 'MBI01_g45790_MAGBIO' => 'mbi', 'MBI02_g32395_MAGBIO' => 'mbi', 'MBI02_g32396_MAGBIO' => 'mbi', 'MBI04_g32263_MAGBIO' => 'mbi', 'MBI07_g00629_MAGBIO' => 'mbi', 'MBI09_g28076_MAGBIO' => 'mbi', 'MBI17_g42497_MAGBIO' => 'mbi', 'MCO09G631' => 'mco', 'MCO14G078' => 'mco', 'MD02G1040100' => 'mdo', 'MD03G1250900' => 'mdo', 'MD03G1251000' => 'mdo', 'MD03G1251100' => 'mdo', 'MD03G1251200' => 'mdo', 'MD04G1070000' => 'mdo', 'MD04G1070100' => 'mdo', 'MD04G1076800' => 'mdo', 'MD05G1158500' => 'mdo', 'MD10G1052000' => 'mdo', 'MD10G1151500' => 'mdo', 'MD11G1271200' => 'mdo', 'MD11G1271700' => 'mdo', 'MD11G1271800' => 'mdo', 'MD15G1145000' => 'mdo', 'Medtr2g073070' => 'mtr', 'Medtr2g073080' => 'mtr', 'Medtr2g073190' => 'mtr', 'Medtr2g078500' => 'mtr', 'Medtr4g113090' => 'mtr', 'Medtr5g011440' => 'mtr', 'Medtr5g011450' => 'mtr', 'Medtr7g053090' => 'mtr', 'MELO3C012726.2' => 'cme', 'MELO3C014000.2' => 'cme', 'MELO3C016503.2' => 'cme', 'MELO3C016505.2' => 'cme', 'MELO3C025304.2' => 'cme', 'MELO3C025675.2' => 'cme', 'MELO3C029124.2' => 'cme', 'Migut.A00837' => 'egut', 'Migut.A00874' => 'egut', 'Migut.M00688' => 'egut', 'Migut.N00666' => 'egut', 'Migut.N00828' => 'egut', 'MSTRG.12040' => 'ama', 'MSTRG.12057' => 'ama', 'MSTRG.14988' => 'ama', 'MSTRG.17970' => 'ama', 'MSTRG.25550' => 'ama', 'Nitab4.5_0000038g0160' => 'nta', 'Nitab4.5_0000092g0190' => 'nta', 'Nitab4.5_0000092g0330' => 'nta', 'Nitab4.5_0000432g0050' => 'nta', 'Nitab4.5_0000667g0060' => 'nta', 'Nitab4.5_0000787g0260' => 'nta', 'Nitab4.5_0001265g0140' => 'nta', 'Nitab4.5_0001386g0010' => 'nta', 'Nitab4.5_0001816g0080' => 'nta', 'Nitab4.5_0002550g0030' => 'nta', 'Nitab4.5_0004516g0020' => 'nta', 'Nitab4.5_0005122g0030' => 'nta', 'Nitab4.5_0005122g0040' => 'nta', 'Nitab4.5_0007295g0040' => 'nta', 'Nn1g01188' => 'nnu', 'Nn1g08270' => 'nnu', 'Nn2g10341' => 'nnu', 'Nn2g11861' => 'nnu', 'Nn3g20955' => 'nnu', 'Nn8g39317' => 'nnu', 'Nn8g40352' => 'nnu', 'Oeu010037.1' => 'oeu', 'Oeu010038.1' => 'oeu', 'Oeu018253.4' => 'oeu', 'Oeu048663.1' => 'oeu', 'Oeu049584.1' => 'oeu', 'Oeu049585.1' => 'oeu', 'Oeu049813.3' => 'oeu', 'Oeu057828.1' => 'oeu', 'Oeu064607.2' => 'oeu', 'Os01g0645200' => 'osa', 'Os02g0475400' => 'osa', 'Os04g0381100' => 'osa', 'Os09g0520600' => 'osa', 'Os12g0170300' => 'osa', 'Peaxi162Scf00000g76016' => 'pax', 'Peaxi162Scf00011g01123' => 'pax', 'Peaxi162Scf00044g01817' => 'pax', 'Peaxi162Scf00044g01826' => 'pax', 'Peaxi162Scf00047g02459' => 'pax', 'Peaxi162Scf00047g02462' => 'pax', 'Peaxi162Scf00102g01356' => 'pax', 'Peaxi162Scf00225g00623' => 'pax', 'Peaxi162Scf00335g00069' => 'pax', 'Peaxi162Scf02228g00005' => 'pax', 'PGR031G3430' => 'pgr', 'PGR042G3659' => 'pgr', 'PGR142G1561' => 'pgr', 'PGR142G1792' => 'pgr', 'PGSC0003DMG400001256' => 'stu', 'PGSC0003DMG400012516' => 'stu', 'PGSC0003DMG400019027' => 'stu', 'PGSC0003DMG400028882' => 'stu', 'Phvul.002G151900' => 'pvu', 'Phvul.003G159600' => 'pvu', 'Phvul.005G076100' => 'pvu', 'Phvul.005G078101' => 'pvu', 'Phvul.008G136700' => 'pvu', 'Potri.003G008700' => 'ptr', 'Potri.003G117300' => 'ptr', 'Potri.011G103200' => 'ptr', 'Potri.014G178000' => 'ptr', 'Potri.017G069350' => 'ptr', 'Potri.018G074400' => 'ptr', 'Pp3c14_2960' => 'ppa', 'Pp3c18_12460' => 'ppa', 'Pp3c20_2280' => 'ppa', 'Pp3c23_17660' => 'ppa', 'Pp3c5_7360' => 'ppa', 'Pp3c6_18611' => 'ppa', 'Pp3c6_19720' => 'ppa', 'Pp3c7_7830' => 'ppa', 'PRCOL_00000738' => 'pco', 'PRCOL_00003803' => 'pco', 'PRCOL_00004648' => 'pco', 'Prupe.1G578600' => 'ppe', 'Prupe.4G155400' => 'ppe', 'Prupe.4G251800' => 'ppe', 'Prupe.5G082600' => 'ppe', 'Prupe.5G099300' => 'ppe', 'Prupe.6G004300' => 'ppe', 'Prupe.7G235600' => 'ppe', 'Prupe.8G189900' => 'ppe', 'Psat0s3891g0080' => 'psa', 'Psat0s944g0200' => 'psa', 'Psat1g007560' => 'psa', 'Psat1g007600' => 'psa', 'Psat2g180440' => 'psa', 'Psat2g180480' => 'psa', 'PSO017G6369' => 'pso', 'PSO170G2819' => 'pso', 'PSO170G3630' => 'pso', 'PSO357G0694' => 'pso', 'PSO478G2124' => 'pso', 'PSO541G4101' => 'pso', 'PSO675G4586' => 'pso', 'PSO675G8358' => 'pso', 'PSO782G0848' => 'pso', 'QL02p086503' => 'qlo', 'QL02p100337' => 'qlo', 'QL09p046703' => 'qlo', 'QL12p015803' => 'qlo', 'QL93p0263_0060' => 'qlo', 'RcHm_v2.0_Chr1g0359741' => 'rch', 'RcHm_v2.0_Chr2g0089661' => 'rch', 'RcHm_v2.0_Chr5g0029301' => 'rch', 'RcHm_v2.0_Chr6g0282761' => 'rch', 'RcHm_v2.0_Chr6g0282771' => 'rch', 'RcHm_v2.0_Chr7g0200441' => 'rch', 'Rhsim01G0089900' => 'rsi', 'Rhsim04G0110500' => 'rsi', 'Rhsim05G0172400' => 'rsi', 'Rhsim13G0053000' => 'rsi', 'RhsimUnG0206100' => 'rsi', 'Sabra03G0004300' => 'sbr', 'Sabra03G0081700' => 'sbr', 'Sabra11G0077500' => 'sbr', 'Sabra11G0082400' => 'sbr', 'Sabra14G0136100' => 'sbr', 'Sabra18G0063400' => 'sbr', 'SalBow3G1699' => 'sbo', 'SalBow3G4188' => 'sbo', 'SalBow6G4468' => 'sbo', 'SalBow6G6325' => 'sbo', 'SalBow8G5603' => 'sbo', 'Sc01g0009070' => 'sci', 'Sc05g0001740' => 'sci', 'Sc07g0005160' => 'sci', 'Sc16g0007780' => 'sci', 'Sc18g0000940' => 'sci', 'Sed0007276' => 'sed', 'Sed0008675' => 'sed', 'Sed0011001' => 'sed', 'Sed0014303' => 'sed', 'Sed0016281' => 'sed', 'Sed0019845' => 'sed', 'SEGI_02510' => 'sgi', 'SEGI_05556' => 'sgi', 'SEGI_13894' => 'sgi', 'SEGI_19861' => 'sgi', 'SEGI_39487' => 'sgi', 'SGA_v2.0_scaffold120G32811' => 'sas', 'SGA_v2.0_scaffold37G14858' => 'sas', 'SGA_v2.0_scaffold42G15906' => 'sas', 'SGA_v2.0_scaffold73G24378' => 'sas', 'SGA_v2.0_scaffold77G25297' => 'sas', 'SHI03889' => 'shi', 'SMO143G0190' => 'smo', 'SMO146G0261' => 'smo', 'SMO230G0059' => 'smo', 'SMO367G0186' => 'smo', 'Solyc01g103620.4' => 'sly', 'Solyc05g017950.3' => 'sly', 'Solyc08g007590.3' => 'sly', 'Solyc09g055940.3' => 'sly', 'Solyc10g038090.1' => 'sly', 'Solyc10g038100.1' => 'sly', 'Solyc12g005410.2' => 'sly', 'Sopen01g045990' => 'spe', 'Sopen01g046020' => 'spe', 'Sopen01g046030' => 'spe', 'Sopen05g014570' => 'spe', 'Sopen09g021810' => 'spe', 'Sopen12g001380' => 'spe', 'Sp3g22950' => 'spa', 'Sp4g21150' => 'spa', 'Sp5g33650' => 'spa', 'Sp6g05480' => 'spa', 'Sp7g09790' => 'spa', 'Sp7g20900' => 'spa', 'TAR184G0001' => 'tar', 'TAR375G0451' => 'tar', 'TAR625G0148' => 'tar', 'TAR628G1147' => 'tar', 'TAR629G1459' => 'tar', 'THA.LOC104808812' => 'tha', 'THA.LOC104812302' => 'tha', 'THA.LOC104814036' => 'tha', 'THA.LOC104815245' => 'tha', 'THA.LOC104826532' => 'tha', 'Thecc.01G210500' => 'tca', 'Thecc.02G019300' => 'tca', 'Thecc.03G264500' => 'tca', 'Thecc.07G135000' => 'tca', 'Thecc.09G117500' => 'tca', 'Thhalv10002537m.g' => 'esa', 'Thhalv10016729m.g' => 'esa', 'Thhalv10018656m.g' => 'esa', 'Thhalv10025337m.g' => 'esa', 'Thhalv10028698m.g' => 'esa', 'TPR.G11051' => 'tpr', 'TPR.G19569' => 'tpr', 'TPR.G26797' => 'tpr', 'TPR.G26829' => 'tpr', 'TPR.G35008' => 'tpr', 'TWI15G0455' => 'twi', 'TWI18G0798' => 'twi', 'TWI32G0927' => 'twi', 'TWI38G0474' => 'twi', 'TWI59G1092' => 'twi', 'unitig_0.g415' => 'ugi', 'unitig_21.g20529' => 'ugi', 'unitig_22.g5484' => 'ugi', 'unitig_22.g6855' => 'ugi', 'unitig_62.g23077' => 'ugi', 'vmacro00215' => 'vma', 'vmacro02819' => 'vma', 'vmacro09420' => 'vma', 'vmacro19866' => 'vma', 'vmacro20679' => 'vma', 'VMungo1080G0497' => 'vmu', 'VMungo1080G0956' => 'vmu', 'VMungo1215G0078' => 'vmu', 'VMungo1215G2965' => 'vmu', 'VMungo1215G3122' => 'vmu', 'VMungo1383G2670' => 'vmu', 'Zm00001eb043270' => 'zma', 'Zm00001eb139050' => 'zma', 'Zm00001eb318760' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000943' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000943' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000943' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000943' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000943', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '636', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A03p29530' => 'bna', 'A03p53820' => 'bna', 'A04p29590' => 'bna', 'A05p07410' => 'bna', 'A07p06990' => 'bna', 'A07p43810' => 'bna', 'A09p27090' => 'bna', 'Aa31LG4G2400' => 'aar', 'Aa31LG4G2410' => 'aar', 'Aa31LG5G8880' => 'aar', 'Aa31LG6G4700' => 'aar', 'Aa31LG6G4910' => 'aar', 'Aa31LG9G10450' => 'aar', 'Aa31sc38G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2793' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2927' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.489' => 'aag', 'Actinidia01604' => 'ach', 'Actinidia02071' => 'ach', 'Actinidia03621' => 'ach', 'Actinidia09395' => 'ach', 'Actinidia14485' => 'ach', 'Actinidia23356' => 'ach', 'Actinidia30013' => 'ach', 'Ah.02g116300' => 'amhyb', 'Ah.02g128290' => 'amhyb', 'Ah.04g163940' => 'amhyb', 'Ah.09g227470' => 'amhyb', 'Ah.11g050980' => 'amhyb', 'AL2G38960' => 'aly', 'AL3G41280' => 'aly', 'AL4G20130' => 'aly', 'AL6G46830' => 'aly', 'AL7G30670' => 'aly', 'Aqoxy1G01881' => 'aox', 'Aqoxy5G00043' => 'aox', 'Aqoxy7G00587' => 'aox', 'Aqoxy7G01922' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1K7GD6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1RUKD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AQV2BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AVJ0IE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BUF90N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DI6VX2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P2VAYP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4LTZI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WT9QCD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X0ENSR' => 'arhy', 'AT1G78560' => 'ath', 'AT2G26900' => 'ath', 'AT3G25410' => 'ath', 'AT4G12030' => 'ath', 'AT4G22840' => 'ath', 'ATR0083G040' => 'atr', 'ATR0584G051' => 'atr', 'ATR0609G010' => 'atr', 'ATR0757G175' => 'atr', 'ATR0763G119' => 'atr', 'ATR0810G012' => 'atr', 'Atru.chr6.3542' => 'acertr', 'Atru.chr6.800' => 'acertr', 'Atru.chr7.1273' => 'acertr', 'Atru.chr9.1474' => 'acertr', 'AUR62001469' => 'cqu', 'AUR62008117' => 'cqu', 'AUR62010537' => 'cqu', 'AUR62011044' => 'cqu', 'AUR62013941' => 'cqu', 'AUR62017358' => 'cqu', 'AUR62019668' => 'cqu', 'AUR62028695' => 'cqu', 'AUR62033421' => 'cqu', 'BcaB01g01709' => 'bca', 'BcaB01g02661' => 'bca', 'BcaB02g09151' => 'bca', 'BcaB06g26742' => 'bca', 'BcaC01g04609' => 'bca', 'BcaC02g07446' => 'bca', 'BcaC04g21192' => 'bca', 'BcaC06g35809' => 'bca', 'BcaC08g47434' => 'bca', 'BcaNung01667' => 'bca', 'BcaNung06079' => 'bca', 'BcaNung06080' => 'bca', 'BolC3t15884H' => 'bol', 'BolC4t22476H' => 'bol', 'BolC4t28190H' => 'bol', 'BolC6t40265H' => 'bol', 'BolC7t41527H' => 'bol', 'BolC7t45715H' => 'bol', 'BolC9t56287H' => 'bol', 'BraA03t12148Z' => 'bra', 'BraA03t14451Z' => 'bra', 'BraA03t14607Z' => 'bra', 'BraA03t14608Z' => 'bra', 'BraA03t14610Z' => 'bra', 'BraA03t14612Z' => 'bra', 'BraA04t18424Z' => 'bra', 'BraA05t19707Z' => 'bra', 'BraA07t28489Z' => 'bra', 'BraA07t31890Z' => 'bra', 'BraA09t38280Z' => 'bra', 'C03p35740' => 'bna', 'C04p08880' => 'bna', 'C04p66880' => 'bna', 'C06p52460' => 'bna', 'C07p10620' => 'bna', 'C07p52200' => 'bna', 'C07p52220' => 'bna', 'C09p34440' => 'bna', 'CAN.G1101.3' => 'can', 'CAN.G1237.30' => 'can', 'CAN.G1394.23' => 'can', 'CAN.G2125.2' => 'can', 'CAN.G284.3' => 'can', 'CANSAT01G3037' => 'cansat', 'CANSAT35G0243' => 'cansat', 'CANSAT56G1032' => 'cansat', 'CANSAT56G4068' => 'cansat', 'CARHR072050' => 'chi', 'CARHR101710' => 'chi', 'CARHR119060' => 'chi', 'CARHR229870' => 'chi', 'CARHR254200' => 'chi', 'Carub.0002s2541' => 'cru', 'Carub.0003s2572' => 'cru', 'Carub.0004s0740' => 'cru', 'Carub.0006s3113' => 'cru', 'Carub.0007s1843' => 'cru', 'Ca_03924_v3' => 'car', 'Ca_06680_v3' => 'car', 'Ca_06681_v3' => 'car', 'Ca_07480_v3' => 'car', 'Ca_21720_v3' => 'car', 'Ca_23716_v3' => 'car', 'Ca_26967_v3' => 'car', 'CBR_g40022' => 'cbr', 'CBR_g40023' => 'cbr', 'Cc01_g16100' => 'ccan', 'Cc02_g23100' => 'ccan', 'Cc05_g10620' => 'ccan', 'Cc06_g09180' => 'ccan', 'Cc08_g13510' => 'ccan', 'CDE01G0021' => 'cde', 'CDE05G1302' => 'cde', 'CDE05G2171' => 'cde', 'CDE06G0292' => 'cde', 'CDE06G2531' => 'cde', 'CDE07G0438' => 'cde', 'CDE11G0956' => 'cde', 'Cfa003304' => 'cfa', 'Cfa004493' => 'cfa', 'Cfa010672' => 'cfa', 'Cfa012043' => 'cfa', 'Ciclev10001198m.g' => 'ccl', 'Ciclev10008416m.g' => 'ccl', 'Ciclev10015435m.g' => 'ccl', 'Ciclev10020318m.g' => 'ccl', 'Ciclev10020346m.g' => 'ccl', 'CiPaw.03G236900' => 'cil', 'CiPaw.05G005300' => 'cil', 'CiPaw.11G145100' => 'cil', 'CiPaw.12G110000' => 'cil', 'CiPaw.13G057400' => 'cil', 'ClCG00G000060' => 'cla', 'ClCG06G010520' => 'cla', 'ClCG09G008190' => 'cla', 'ClCG10G003310' => 'cla', 'ClCG10G007030' => 'cla', 'ClCG10G007050' => 'cla', 'ClCG11G017120' => 'cla', 'COL.COLO4_03605' => 'col', 'COL.COLO4_17731' => 'col', 'COL.COLO4_23836' => 'col', 'COL.COLO4_26566' => 'col', 'COL.COLO4_34960' => 'col', 'Cpa.g.sc113.50' => 'cpa', 'Cpa.g.sc1720.1' => 'cpa', 'Cpa.g.sc29.61' => 'cpa', 'Cpa.g.sc682.5' => 'cpa', 'Cpa.g.sc8.67' => 'cpa', 'Cre10.g448350' => 'cre', 'Cre12.g532500' => 'cre', 'Cre17.g725650' => 'cre', 'CsaV3_1G030990' => 'csa', 'CsaV3_3G003330' => 'csa', 'CsaV3_3G006360' => 'csa', 'CsaV3_3G006370' => 'csa', 'CsaV3_4G032780' => 'csa', 'CsaV3_7G026860' => 'csa', 'CSS0004534' => 'camsi', 'CSS0008690' => 'camsi', 'CSS0009276' => 'camsi', 'CSS0010557' => 'camsi', 'CSS0023217' => 'camsi', 'CSS0024707' => 'camsi', 'CSS0026808' => 'camsi', 'CSS0030160' => 'camsi', 'CSS0044087' => 'camsi', 'CSS0045366' => 'camsi', 'DCAR_006674' => 'dca', 'DCAR_006793' => 'dca', 'DCAR_012694' => 'dca', 'DCAR_017587' => 'dca', 'DCAR_020847' => 'dca', 'Dinv10444' => 'din', 'Dinv19403' => 'din', 'Dinv26700' => 'din', 'Dinv28808' => 'din', 'Dinv36591' => 'din', 'Dinv37739' => 'din', 'Dinv39055' => 'din', 'Dinv41560' => 'din', 'Duzib084G1296' => 'dzi', 'Duzib132G0520' => 'dzi', 'Duzib138G0240' => 'dzi', 'Duzib150G0624' => 'dzi', 'Duzib187G0454' => 'dzi', 'Duzib187G1914' => 'dzi', 'Duzib205G1220' => 'dzi', 'Duzib211G0104' => 'dzi', 'ECA234G0075' => 'eca', 'ECA234G0636' => 'eca', 'ECA240G1417' => 'eca', 'ECA240G3303' => 'eca', 'ECA247G1772' => 'eca', 'EL10Ac4g08437' => 'bvu', 'EL10Ac4g08445' => 'bvu', 'EL10Ac5g10622' => 'bvu', 'EL10Ac5g12655' => 'bvu', 'EL10Ac8g18562' => 'bvu', 'Eucgr.C01098' => 'egr', 'Eucgr.E00493' => 'egr', 'Eucgr.E00495' => 'egr', 'Eucgr.E00496' => 'egr', 'Eucgr.F03227' => 'egr', 'Eucgr.K02087' => 'egr', 'FAN04G0330' => 'fan', 'FAN08G1877' => 'fan', 'FAN11G0107' => 'fan', 'FAN13G3095' => 'fan', 'FAN15G3350' => 'fan', 'FAN16G1964' => 'fan', 'FAN18G1821' => 'fan', 'FAN19G2692' => 'fan', 'FAN21G2606' => 'fan', 'FAN24G2729' => 'fan', 'FAN25G0219' => 'fan', 'FAN26G1677' => 'fan', 'FAN27G0924' => 'fan', 'FAN27G2532' => 'fan', 'FAN28G0154' => 'fan', 'FvH4_1g04160' => 'fve', 'FvH4_2g17730' => 'fve', 'FvH4_3g17590' => 'fve', 'FvH4_5g00950' => 'fve', 'Glyma.01G213400' => 'gma', 'Glyma.03G041400' => 'gma', 'Glyma.05G011700' => 'gma', 'Glyma.08G344000' => 'gma', 'Glyma.11G028500' => 'gma', 'Glyma.12G234600' => 'gma', 'Glyma.13G264300' => 'gma', 'Glyma.17G119900' => 'gma', 'Gohir.A01G046900' => 'ghi', 'Gohir.A04G133050' => 'ghi', 'Gohir.A04G133500' => 'ghi', 'Gohir.A06G059400' => 'ghi', 'Gohir.A07G196600' => 'ghi', 'Gohir.A08G048000' => 'ghi', 'Gohir.A12G222600' => 'ghi', 'Gohir.A13G197200' => 'ghi', 'Gohir.D01G037600' => 'ghi', 'Gohir.D04G176600' => 'ghi', 'Gohir.D06G057600' => 'ghi', 'Gohir.D07G202900' => 'ghi', 'Gohir.D07G203000' => 'ghi', 'Gohir.D08G058100' => 'ghi', 'Gohir.D12G225100' => 'ghi', 'Gohir.D13G202500' => 'ghi', 'Gohir.D13G202650' => 'ghi', 'Gorai.001G228400' => 'gra', 'Gorai.002G045800' => 'gra', 'Gorai.003G059400' => 'gra', 'Gorai.004G059400' => 'gra', 'Gorai.004G059600' => 'gra', 'Gorai.004G059800' => 'gra', 'Gorai.004G060000' => 'gra', 'Gorai.008G241200' => 'gra', 'Gorai.010G067700' => 'gra', 'Gorai.011G136100' => 'gra', 'Gorai.012G168600' => 'gra', 'Gorai.012G169500' => 'gra', 'Gorai.013G231400' => 'gra', 'Gorai.013G231700' => 'gra', 'GSVIVG01003813001' => 'vvi', 'GSVIVG01014084001' => 'vvi', 'GSVIVG01014085001' => 'vvi', 'GSVIVG01015459001' => 'vvi', 'GSVIVG01023255001' => 'vvi', 'HanXRQChr01g0027191' => 'han', 'HanXRQChr03g0087371' => 'han', 'HanXRQChr07g0193281' => 'han', 'HanXRQChr08g0226421' => 'han', 'HanXRQChr08g0231881' => 'han', 'HanXRQChr09g0238611' => 'han', 'HanXRQChr09g0243901' => 'han', 'HanXRQChr10g0305601' => 'han', 'HanXRQChr12g0382021' => 'han', 'HanXRQChr13g0393571' => 'han', 'HanXRQChr13g0417211' => 'han', 'HanXRQChr13g0422401' => 'han', 'Haze_03598' => 'cav', 'Haze_08446' => 'cav', 'Haze_09024' => 'cav', 'Haze_09029' => 'cav', 'Haze_09034' => 'cav', 'Haze_10048' => 'cav', 'Haze_25657' => 'cav', 'Hma1.2p1_0018F.1_g013040' => 'hma', 'Hma1.2p1_0138F.1_g062960' => 'hma', 'Hma1.2p1_0161F.1_g071415' => 'hma', 'Hma1.2p1_2174F.1_g316050' => 'hma', 'HPP92_001547' => 'vpl', 'HPP92_008099' => 'vpl', 'HPP92_011385' => 'vpl', 'HPP92_018428' => 'vpl', 'HPP92_021804' => 'vpl', 'Hund09168' => 'sun', 'Hund09470' => 'sun', 'Hund10402' => 'sun', 'Hund14677' => 'sun', 'Hund15466' => 'sun', 'Lalb_Chr01g0016271' => 'lal', 'Lalb_Chr07g0178681' => 'lal', 'Lalb_Chr09g0324591' => 'lal', 'Lalb_Chr12g0197651' => 'lal', 'Lalb_Chr19g0126141' => 'lal', 'Lj1A101G44' => 'lonja', 'Lj1A822T51' => 'lonja', 'Lj1g0017934' => 'lja', 'Lj2C204T5' => 'lonja', 'Lj2g0012794' => 'lja', 'Lj2g0023300' => 'lja', 'Lj3g0014038' => 'lja', 'Lj4g0024728' => 'lja', 'Lj5A262G66' => 'lonja', 'Lj7A638T62' => 'lonja', 'Lsat_1_v5_gn_5_126301' => 'lsa', 'Lsat_1_v5_gn_6_88660' => 'lsa', 'Lsat_1_v5_gn_6_88680' => 'lsa', 'Lsat_1_v5_gn_6_88700' => 'lsa', 'Lsat_1_v5_gn_6_88720' => 'lsa', 'Lsat_1_v5_gn_9_120381' => 'lsa', 'Lsat_1_v5_gn_9_16381' => 'lsa', 'Manes.01G071200' => 'mes', 'Manes.03G078100' => 'mes', 'Manes.07G023600' => 'mes', 'Manes.10G118900' => 'mes', 'Manes.13G054700' => 'mes', 'Manes.16G063700' => 'mes', 'Mapoly0002s0291' => 'mpo', 'Mapoly0020s0121' => 'mpo', 'Mapoly0030s0051' => 'mpo', 'Mapoly0050s0070' => 'mpo', 'MBI01_g03565_MAGBIO' => 'mbi', 'MBI01_g45790_MAGBIO' => 'mbi', 'MBI02_g32395_MAGBIO' => 'mbi', 'MBI02_g32396_MAGBIO' => 'mbi', 'MBI04_g32263_MAGBIO' => 'mbi', 'MBI07_g00629_MAGBIO' => 'mbi', 'MBI09_g28076_MAGBIO' => 'mbi', 'MBI17_g42497_MAGBIO' => 'mbi', 'MCO09G631' => 'mco', 'MCO14G078' => 'mco', 'MD02G1040100' => 'mdo', 'MD03G1250900' => 'mdo', 'MD03G1251000' => 'mdo', 'MD03G1251100' => 'mdo', 'MD03G1251200' => 'mdo', 'MD04G1070000' => 'mdo', 'MD04G1070100' => 'mdo', 'MD04G1076800' => 'mdo', 'MD05G1158500' => 'mdo', 'MD10G1052000' => 'mdo', 'MD10G1151500' => 'mdo', 'MD11G1271200' => 'mdo', 'MD11G1271700' => 'mdo', 'MD11G1271800' => 'mdo', 'MD15G1145000' => 'mdo', 'Medtr2g073070' => 'mtr', 'Medtr2g073080' => 'mtr', 'Medtr2g073190' => 'mtr', 'Medtr2g078500' => 'mtr', 'Medtr4g113090' => 'mtr', 'Medtr5g011440' => 'mtr', 'Medtr5g011450' => 'mtr', 'Medtr7g053090' => 'mtr', 'MELO3C012726.2' => 'cme', 'MELO3C014000.2' => 'cme', 'MELO3C016503.2' => 'cme', 'MELO3C016505.2' => 'cme', 'MELO3C025304.2' => 'cme', 'MELO3C025675.2' => 'cme', 'MELO3C029124.2' => 'cme', 'Migut.A00837' => 'egut', 'Migut.A00874' => 'egut', 'Migut.M00688' => 'egut', 'Migut.N00666' => 'egut', 'Migut.N00828' => 'egut', 'MSTRG.12040' => 'ama', 'MSTRG.12057' => 'ama', 'MSTRG.14988' => 'ama', 'MSTRG.17970' => 'ama', 'MSTRG.25550' => 'ama', 'Nitab4.5_0000038g0160' => 'nta', 'Nitab4.5_0000092g0190' => 'nta', 'Nitab4.5_0000092g0330' => 'nta', 'Nitab4.5_0000432g0050' => 'nta', 'Nitab4.5_0000667g0060' => 'nta', 'Nitab4.5_0000787g0260' => 'nta', 'Nitab4.5_0001265g0140' => 'nta', 'Nitab4.5_0001386g0010' => 'nta', 'Nitab4.5_0001816g0080' => 'nta', 'Nitab4.5_0002550g0030' => 'nta', 'Nitab4.5_0004516g0020' => 'nta', 'Nitab4.5_0005122g0030' => 'nta', 'Nitab4.5_0005122g0040' => 'nta', 'Nitab4.5_0007295g0040' => 'nta', 'Nn1g01188' => 'nnu', 'Nn1g08270' => 'nnu', 'Nn2g10341' => 'nnu', 'Nn2g11861' => 'nnu', 'Nn3g20955' => 'nnu', 'Nn8g39317' => 'nnu', 'Nn8g40352' => 'nnu', 'Oeu010037.1' => 'oeu', 'Oeu010038.1' => 'oeu', 'Oeu018253.4' => 'oeu', 'Oeu048663.1' => 'oeu', 'Oeu049584.1' => 'oeu', 'Oeu049585.1' => 'oeu', 'Oeu049813.3' => 'oeu', 'Oeu057828.1' => 'oeu', 'Oeu064607.2' => 'oeu', 'Os01g0645200' => 'osa', 'Os02g0475400' => 'osa', 'Os04g0381100' => 'osa', 'Os09g0520600' => 'osa', 'Os12g0170300' => 'osa', 'Peaxi162Scf00000g76016' => 'pax', 'Peaxi162Scf00011g01123' => 'pax', 'Peaxi162Scf00044g01817' => 'pax', 'Peaxi162Scf00044g01826' => 'pax', 'Peaxi162Scf00047g02459' => 'pax', 'Peaxi162Scf00047g02462' => 'pax', 'Peaxi162Scf00102g01356' => 'pax', 'Peaxi162Scf00225g00623' => 'pax', 'Peaxi162Scf00335g00069' => 'pax', 'Peaxi162Scf02228g00005' => 'pax', 'PGR031G3430' => 'pgr', 'PGR042G3659' => 'pgr', 'PGR142G1561' => 'pgr', 'PGR142G1792' => 'pgr', 'PGSC0003DMG400001256' => 'stu', 'PGSC0003DMG400012516' => 'stu', 'PGSC0003DMG400019027' => 'stu', 'PGSC0003DMG400028882' => 'stu', 'Phvul.002G151900' => 'pvu', 'Phvul.003G159600' => 'pvu', 'Phvul.005G076100' => 'pvu', 'Phvul.005G078101' => 'pvu', 'Phvul.008G136700' => 'pvu', 'Potri.003G008700' => 'ptr', 'Potri.003G117300' => 'ptr', 'Potri.011G103200' => 'ptr', 'Potri.014G178000' => 'ptr', 'Potri.017G069350' => 'ptr', 'Potri.018G074400' => 'ptr', 'Pp3c14_2960' => 'ppa', 'Pp3c18_12460' => 'ppa', 'Pp3c20_2280' => 'ppa', 'Pp3c23_17660' => 'ppa', 'Pp3c5_7360' => 'ppa', 'Pp3c6_18611' => 'ppa', 'Pp3c6_19720' => 'ppa', 'Pp3c7_7830' => 'ppa', 'PRCOL_00000738' => 'pco', 'PRCOL_00003803' => 'pco', 'PRCOL_00004648' => 'pco', 'Prupe.1G578600' => 'ppe', 'Prupe.4G155400' => 'ppe', 'Prupe.4G251800' => 'ppe', 'Prupe.5G082600' => 'ppe', 'Prupe.5G099300' => 'ppe', 'Prupe.6G004300' => 'ppe', 'Prupe.7G235600' => 'ppe', 'Prupe.8G189900' => 'ppe', 'Psat0s3891g0080' => 'psa', 'Psat0s944g0200' => 'psa', 'Psat1g007560' => 'psa', 'Psat1g007600' => 'psa', 'Psat2g180440' => 'psa', 'Psat2g180480' => 'psa', 'PSO017G6369' => 'pso', 'PSO170G2819' => 'pso', 'PSO170G3630' => 'pso', 'PSO357G0694' => 'pso', 'PSO478G2124' => 'pso', 'PSO541G4101' => 'pso', 'PSO675G4586' => 'pso', 'PSO675G8358' => 'pso', 'PSO782G0848' => 'pso', 'QL02p086503' => 'qlo', 'QL02p100337' => 'qlo', 'QL09p046703' => 'qlo', 'QL12p015803' => 'qlo', 'QL93p0263_0060' => 'qlo', 'RcHm_v2.0_Chr1g0359741' => 'rch', 'RcHm_v2.0_Chr2g0089661' => 'rch', 'RcHm_v2.0_Chr5g0029301' => 'rch', 'RcHm_v2.0_Chr6g0282761' => 'rch', 'RcHm_v2.0_Chr6g0282771' => 'rch', 'RcHm_v2.0_Chr7g0200441' => 'rch', 'Rhsim01G0089900' => 'rsi', 'Rhsim04G0110500' => 'rsi', 'Rhsim05G0172400' => 'rsi', 'Rhsim13G0053000' => 'rsi', 'RhsimUnG0206100' => 'rsi', 'Sabra03G0004300' => 'sbr', 'Sabra03G0081700' => 'sbr', 'Sabra11G0077500' => 'sbr', 'Sabra11G0082400' => 'sbr', 'Sabra14G0136100' => 'sbr', 'Sabra18G0063400' => 'sbr', 'SalBow3G1699' => 'sbo', 'SalBow3G4188' => 'sbo', 'SalBow6G4468' => 'sbo', 'SalBow6G6325' => 'sbo', 'SalBow8G5603' => 'sbo', 'Sc01g0009070' => 'sci', 'Sc05g0001740' => 'sci', 'Sc07g0005160' => 'sci', 'Sc16g0007780' => 'sci', 'Sc18g0000940' => 'sci', 'Sed0007276' => 'sed', 'Sed0008675' => 'sed', 'Sed0011001' => 'sed', 'Sed0014303' => 'sed', 'Sed0016281' => 'sed', 'Sed0019845' => 'sed', 'SEGI_02510' => 'sgi', 'SEGI_05556' => 'sgi', 'SEGI_13894' => 'sgi', 'SEGI_19861' => 'sgi', 'SEGI_39487' => 'sgi', 'SGA_v2.0_scaffold120G32811' => 'sas', 'SGA_v2.0_scaffold37G14858' => 'sas', 'SGA_v2.0_scaffold42G15906' => 'sas', 'SGA_v2.0_scaffold73G24378' => 'sas', 'SGA_v2.0_scaffold77G25297' => 'sas', 'SHI03889' => 'shi', 'SMO143G0190' => 'smo', 'SMO146G0261' => 'smo', 'SMO230G0059' => 'smo', 'SMO367G0186' => 'smo', 'Solyc01g103620.4' => 'sly', 'Solyc05g017950.3' => 'sly', 'Solyc08g007590.3' => 'sly', 'Solyc09g055940.3' => 'sly', 'Solyc10g038090.1' => 'sly', 'Solyc10g038100.1' => 'sly', 'Solyc12g005410.2' => 'sly', 'Sopen01g045990' => 'spe', 'Sopen01g046020' => 'spe', 'Sopen01g046030' => 'spe', 'Sopen05g014570' => 'spe', 'Sopen09g021810' => 'spe', 'Sopen12g001380' => 'spe', 'Sp3g22950' => 'spa', 'Sp4g21150' => 'spa', 'Sp5g33650' => 'spa', 'Sp6g05480' => 'spa', 'Sp7g09790' => 'spa', 'Sp7g20900' => 'spa', 'TAR184G0001' => 'tar', 'TAR375G0451' => 'tar', 'TAR625G0148' => 'tar', 'TAR628G1147' => 'tar', 'TAR629G1459' => 'tar', 'THA.LOC104808812' => 'tha', 'THA.LOC104812302' => 'tha', 'THA.LOC104814036' => 'tha', 'THA.LOC104815245' => 'tha', 'THA.LOC104826532' => 'tha', 'Thecc.01G210500' => 'tca', 'Thecc.02G019300' => 'tca', 'Thecc.03G264500' => 'tca', 'Thecc.07G135000' => 'tca', 'Thecc.09G117500' => 'tca', 'Thhalv10002537m.g' => 'esa', 'Thhalv10016729m.g' => 'esa', 'Thhalv10018656m.g' => 'esa', 'Thhalv10025337m.g' => 'esa', 'Thhalv10028698m.g' => 'esa', 'TPR.G11051' => 'tpr', 'TPR.G19569' => 'tpr', 'TPR.G26797' => 'tpr', 'TPR.G26829' => 'tpr', 'TPR.G35008' => 'tpr', 'TWI15G0455' => 'twi', 'TWI18G0798' => 'twi', 'TWI32G0927' => 'twi', 'TWI38G0474' => 'twi', 'TWI59G1092' => 'twi', 'unitig_0.g415' => 'ugi', 'unitig_21.g20529' => 'ugi', 'unitig_22.g5484' => 'ugi', 'unitig_22.g6855' => 'ugi', 'unitig_62.g23077' => 'ugi', 'vmacro00215' => 'vma', 'vmacro02819' => 'vma', 'vmacro09420' => 'vma', 'vmacro19866' => 'vma', 'vmacro20679' => 'vma', 'VMungo1080G0497' => 'vmu', 'VMungo1080G0956' => 'vmu', 'VMungo1215G0078' => 'vmu', 'VMungo1215G2965' => 'vmu', 'VMungo1215G3122' => 'vmu', 'VMungo1383G2670' => 'vmu', 'Zm00001eb043270' => 'zma', 'Zm00001eb139050' => 'zma', 'Zm00001eb318760' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000943', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000943' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000943', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '636', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000943' ) ), 'genes' => array( 'A03p29530' => 'bna', 'A03p53820' => 'bna', 'A04p29590' => 'bna', 'A05p07410' => 'bna', 'A07p06990' => 'bna', 'A07p43810' => 'bna', 'A09p27090' => 'bna', 'Aa31LG4G2400' => 'aar', 'Aa31LG4G2410' => 'aar', 'Aa31LG5G8880' => 'aar', 'Aa31LG6G4700' => 'aar', 'Aa31LG6G4910' => 'aar', 'Aa31LG9G10450' => 'aar', 'Aa31sc38G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2793' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2927' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.489' => 'aag', 'Actinidia01604' => 'ach', 'Actinidia02071' => 'ach', 'Actinidia03621' => 'ach', 'Actinidia09395' => 'ach', 'Actinidia14485' => 'ach', 'Actinidia23356' => 'ach', 'Actinidia30013' => 'ach', 'Ah.02g116300' => 'amhyb', 'Ah.02g128290' => 'amhyb', 'Ah.04g163940' => 'amhyb', 'Ah.09g227470' => 'amhyb', 'Ah.11g050980' => 'amhyb', 'AL2G38960' => 'aly', 'AL3G41280' => 'aly', 'AL4G20130' => 'aly', 'AL6G46830' => 'aly', 'AL7G30670' => 'aly', 'Aqoxy1G01881' => 'aox', 'Aqoxy5G00043' => 'aox', 'Aqoxy7G00587' => 'aox', 'Aqoxy7G01922' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1K7GD6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1RUKD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AQV2BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AVJ0IE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BUF90N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DI6VX2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P2VAYP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4LTZI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WT9QCD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X0ENSR' => 'arhy', 'AT1G78560' => 'ath', 'AT2G26900' => 'ath', 'AT3G25410' => 'ath', 'AT4G12030' => 'ath', 'AT4G22840' => 'ath', 'ATR0083G040' => 'atr', 'ATR0584G051' => 'atr', 'ATR0609G010' => 'atr', 'ATR0757G175' => 'atr', 'ATR0763G119' => 'atr', 'ATR0810G012' => 'atr', 'Atru.chr6.3542' => 'acertr', 'Atru.chr6.800' => 'acertr', 'Atru.chr7.1273' => 'acertr', 'Atru.chr9.1474' => 'acertr', 'AUR62001469' => 'cqu', 'AUR62008117' => 'cqu', 'AUR62010537' => 'cqu', 'AUR62011044' => 'cqu', 'AUR62013941' => 'cqu', 'AUR62017358' => 'cqu', 'AUR62019668' => 'cqu', 'AUR62028695' => 'cqu', 'AUR62033421' => 'cqu', 'BcaB01g01709' => 'bca', 'BcaB01g02661' => 'bca', 'BcaB02g09151' => 'bca', 'BcaB06g26742' => 'bca', 'BcaC01g04609' => 'bca', 'BcaC02g07446' => 'bca', 'BcaC04g21192' => 'bca', 'BcaC06g35809' => 'bca', 'BcaC08g47434' => 'bca', 'BcaNung01667' => 'bca', 'BcaNung06079' => 'bca', 'BcaNung06080' => 'bca', 'BolC3t15884H' => 'bol', 'BolC4t22476H' => 'bol', 'BolC4t28190H' => 'bol', 'BolC6t40265H' => 'bol', 'BolC7t41527H' => 'bol', 'BolC7t45715H' => 'bol', 'BolC9t56287H' => 'bol', 'BraA03t12148Z' => 'bra', 'BraA03t14451Z' => 'bra', 'BraA03t14607Z' => 'bra', 'BraA03t14608Z' => 'bra', 'BraA03t14610Z' => 'bra', 'BraA03t14612Z' => 'bra', 'BraA04t18424Z' => 'bra', 'BraA05t19707Z' => 'bra', 'BraA07t28489Z' => 'bra', 'BraA07t31890Z' => 'bra', 'BraA09t38280Z' => 'bra', 'C03p35740' => 'bna', 'C04p08880' => 'bna', 'C04p66880' => 'bna', 'C06p52460' => 'bna', 'C07p10620' => 'bna', 'C07p52200' => 'bna', 'C07p52220' => 'bna', 'C09p34440' => 'bna', 'CAN.G1101.3' => 'can', 'CAN.G1237.30' => 'can', 'CAN.G1394.23' => 'can', 'CAN.G2125.2' => 'can', 'CAN.G284.3' => 'can', 'CANSAT01G3037' => 'cansat', 'CANSAT35G0243' => 'cansat', 'CANSAT56G1032' => 'cansat', 'CANSAT56G4068' => 'cansat', 'CARHR072050' => 'chi', 'CARHR101710' => 'chi', 'CARHR119060' => 'chi', 'CARHR229870' => 'chi', 'CARHR254200' => 'chi', 'Carub.0002s2541' => 'cru', 'Carub.0003s2572' => 'cru', 'Carub.0004s0740' => 'cru', 'Carub.0006s3113' => 'cru', 'Carub.0007s1843' => 'cru', 'Ca_03924_v3' => 'car', 'Ca_06680_v3' => 'car', 'Ca_06681_v3' => 'car', 'Ca_07480_v3' => 'car', 'Ca_21720_v3' => 'car', 'Ca_23716_v3' => 'car', 'Ca_26967_v3' => 'car', 'CBR_g40022' => 'cbr', 'CBR_g40023' => 'cbr', 'Cc01_g16100' => 'ccan', 'Cc02_g23100' => 'ccan', 'Cc05_g10620' => 'ccan', 'Cc06_g09180' => 'ccan', 'Cc08_g13510' => 'ccan', 'CDE01G0021' => 'cde', 'CDE05G1302' => 'cde', 'CDE05G2171' => 'cde', 'CDE06G0292' => 'cde', 'CDE06G2531' => 'cde', 'CDE07G0438' => 'cde', 'CDE11G0956' => 'cde', 'Cfa003304' => 'cfa', 'Cfa004493' => 'cfa', 'Cfa010672' => 'cfa', 'Cfa012043' => 'cfa', 'Ciclev10001198m.g' => 'ccl', 'Ciclev10008416m.g' => 'ccl', 'Ciclev10015435m.g' => 'ccl', 'Ciclev10020318m.g' => 'ccl', 'Ciclev10020346m.g' => 'ccl', 'CiPaw.03G236900' => 'cil', 'CiPaw.05G005300' => 'cil', 'CiPaw.11G145100' => 'cil', 'CiPaw.12G110000' => 'cil', 'CiPaw.13G057400' => 'cil', 'ClCG00G000060' => 'cla', 'ClCG06G010520' => 'cla', 'ClCG09G008190' => 'cla', 'ClCG10G003310' => 'cla', 'ClCG10G007030' => 'cla', 'ClCG10G007050' => 'cla', 'ClCG11G017120' => 'cla', 'COL.COLO4_03605' => 'col', 'COL.COLO4_17731' => 'col', 'COL.COLO4_23836' => 'col', 'COL.COLO4_26566' => 'col', 'COL.COLO4_34960' => 'col', 'Cpa.g.sc113.50' => 'cpa', 'Cpa.g.sc1720.1' => 'cpa', 'Cpa.g.sc29.61' => 'cpa', 'Cpa.g.sc682.5' => 'cpa', 'Cpa.g.sc8.67' => 'cpa', 'Cre10.g448350' => 'cre', 'Cre12.g532500' => 'cre', 'Cre17.g725650' => 'cre', 'CsaV3_1G030990' => 'csa', 'CsaV3_3G003330' => 'csa', 'CsaV3_3G006360' => 'csa', 'CsaV3_3G006370' => 'csa', 'CsaV3_4G032780' => 'csa', 'CsaV3_7G026860' => 'csa', 'CSS0004534' => 'camsi', 'CSS0008690' => 'camsi', 'CSS0009276' => 'camsi', 'CSS0010557' => 'camsi', 'CSS0023217' => 'camsi', 'CSS0024707' => 'camsi', 'CSS0026808' => 'camsi', 'CSS0030160' => 'camsi', 'CSS0044087' => 'camsi', 'CSS0045366' => 'camsi', 'DCAR_006674' => 'dca', 'DCAR_006793' => 'dca', 'DCAR_012694' => 'dca', 'DCAR_017587' => 'dca', 'DCAR_020847' => 'dca', 'Dinv10444' => 'din', 'Dinv19403' => 'din', 'Dinv26700' => 'din', 'Dinv28808' => 'din', 'Dinv36591' => 'din', 'Dinv37739' => 'din', 'Dinv39055' => 'din', 'Dinv41560' => 'din', 'Duzib084G1296' => 'dzi', 'Duzib132G0520' => 'dzi', 'Duzib138G0240' => 'dzi', 'Duzib150G0624' => 'dzi', 'Duzib187G0454' => 'dzi', 'Duzib187G1914' => 'dzi', 'Duzib205G1220' => 'dzi', 'Duzib211G0104' => 'dzi', 'ECA234G0075' => 'eca', 'ECA234G0636' => 'eca', 'ECA240G1417' => 'eca', 'ECA240G3303' => 'eca', 'ECA247G1772' => 'eca', 'EL10Ac4g08437' => 'bvu', 'EL10Ac4g08445' => 'bvu', 'EL10Ac5g10622' => 'bvu', 'EL10Ac5g12655' => 'bvu', 'EL10Ac8g18562' => 'bvu', 'Eucgr.C01098' => 'egr', 'Eucgr.E00493' => 'egr', 'Eucgr.E00495' => 'egr', 'Eucgr.E00496' => 'egr', 'Eucgr.F03227' => 'egr', 'Eucgr.K02087' => 'egr', 'FAN04G0330' => 'fan', 'FAN08G1877' => 'fan', 'FAN11G0107' => 'fan', 'FAN13G3095' => 'fan', 'FAN15G3350' => 'fan', 'FAN16G1964' => 'fan', 'FAN18G1821' => 'fan', 'FAN19G2692' => 'fan', 'FAN21G2606' => 'fan', 'FAN24G2729' => 'fan', 'FAN25G0219' => 'fan', 'FAN26G1677' => 'fan', 'FAN27G0924' => 'fan', 'FAN27G2532' => 'fan', 'FAN28G0154' => 'fan', 'FvH4_1g04160' => 'fve', 'FvH4_2g17730' => 'fve', 'FvH4_3g17590' => 'fve', 'FvH4_5g00950' => 'fve', 'Glyma.01G213400' => 'gma', 'Glyma.03G041400' => 'gma', 'Glyma.05G011700' => 'gma', 'Glyma.08G344000' => 'gma', 'Glyma.11G028500' => 'gma', 'Glyma.12G234600' => 'gma', 'Glyma.13G264300' => 'gma', 'Glyma.17G119900' => 'gma', 'Gohir.A01G046900' => 'ghi', 'Gohir.A04G133050' => 'ghi', 'Gohir.A04G133500' => 'ghi', 'Gohir.A06G059400' => 'ghi', 'Gohir.A07G196600' => 'ghi', 'Gohir.A08G048000' => 'ghi', 'Gohir.A12G222600' => 'ghi', 'Gohir.A13G197200' => 'ghi', 'Gohir.D01G037600' => 'ghi', 'Gohir.D04G176600' => 'ghi', 'Gohir.D06G057600' => 'ghi', 'Gohir.D07G202900' => 'ghi', 'Gohir.D07G203000' => 'ghi', 'Gohir.D08G058100' => 'ghi', 'Gohir.D12G225100' => 'ghi', 'Gohir.D13G202500' => 'ghi', 'Gohir.D13G202650' => 'ghi', 'Gorai.001G228400' => 'gra', 'Gorai.002G045800' => 'gra', 'Gorai.003G059400' => 'gra', 'Gorai.004G059400' => 'gra', 'Gorai.004G059600' => 'gra', 'Gorai.004G059800' => 'gra', 'Gorai.004G060000' => 'gra', 'Gorai.008G241200' => 'gra', 'Gorai.010G067700' => 'gra', 'Gorai.011G136100' => 'gra', 'Gorai.012G168600' => 'gra', 'Gorai.012G169500' => 'gra', 'Gorai.013G231400' => 'gra', 'Gorai.013G231700' => 'gra', 'GSVIVG01003813001' => 'vvi', 'GSVIVG01014084001' => 'vvi', 'GSVIVG01014085001' => 'vvi', 'GSVIVG01015459001' => 'vvi', 'GSVIVG01023255001' => 'vvi', 'HanXRQChr01g0027191' => 'han', 'HanXRQChr03g0087371' => 'han', 'HanXRQChr07g0193281' => 'han', 'HanXRQChr08g0226421' => 'han', 'HanXRQChr08g0231881' => 'han', 'HanXRQChr09g0238611' => 'han', 'HanXRQChr09g0243901' => 'han', 'HanXRQChr10g0305601' => 'han', 'HanXRQChr12g0382021' => 'han', 'HanXRQChr13g0393571' => 'han', 'HanXRQChr13g0417211' => 'han', 'HanXRQChr13g0422401' => 'han', 'Haze_03598' => 'cav', 'Haze_08446' => 'cav', 'Haze_09024' => 'cav', 'Haze_09029' => 'cav', 'Haze_09034' => 'cav', 'Haze_10048' => 'cav', 'Haze_25657' => 'cav', 'Hma1.2p1_0018F.1_g013040' => 'hma', 'Hma1.2p1_0138F.1_g062960' => 'hma', 'Hma1.2p1_0161F.1_g071415' => 'hma', 'Hma1.2p1_2174F.1_g316050' => 'hma', 'HPP92_001547' => 'vpl', 'HPP92_008099' => 'vpl', 'HPP92_011385' => 'vpl', 'HPP92_018428' => 'vpl', 'HPP92_021804' => 'vpl', 'Hund09168' => 'sun', 'Hund09470' => 'sun', 'Hund10402' => 'sun', 'Hund14677' => 'sun', 'Hund15466' => 'sun', 'Lalb_Chr01g0016271' => 'lal', 'Lalb_Chr07g0178681' => 'lal', 'Lalb_Chr09g0324591' => 'lal', 'Lalb_Chr12g0197651' => 'lal', 'Lalb_Chr19g0126141' => 'lal', 'Lj1A101G44' => 'lonja', 'Lj1A822T51' => 'lonja', 'Lj1g0017934' => 'lja', 'Lj2C204T5' => 'lonja', 'Lj2g0012794' => 'lja', 'Lj2g0023300' => 'lja', 'Lj3g0014038' => 'lja', 'Lj4g0024728' => 'lja', 'Lj5A262G66' => 'lonja', 'Lj7A638T62' => 'lonja', 'Lsat_1_v5_gn_5_126301' => 'lsa', 'Lsat_1_v5_gn_6_88660' => 'lsa', 'Lsat_1_v5_gn_6_88680' => 'lsa', 'Lsat_1_v5_gn_6_88700' => 'lsa', 'Lsat_1_v5_gn_6_88720' => 'lsa', 'Lsat_1_v5_gn_9_120381' => 'lsa', 'Lsat_1_v5_gn_9_16381' => 'lsa', 'Manes.01G071200' => 'mes', 'Manes.03G078100' => 'mes', 'Manes.07G023600' => 'mes', 'Manes.10G118900' => 'mes', 'Manes.13G054700' => 'mes', 'Manes.16G063700' => 'mes', 'Mapoly0002s0291' => 'mpo', 'Mapoly0020s0121' => 'mpo', 'Mapoly0030s0051' => 'mpo', 'Mapoly0050s0070' => 'mpo', 'MBI01_g03565_MAGBIO' => 'mbi', 'MBI01_g45790_MAGBIO' => 'mbi', 'MBI02_g32395_MAGBIO' => 'mbi', 'MBI02_g32396_MAGBIO' => 'mbi', 'MBI04_g32263_MAGBIO' => 'mbi', 'MBI07_g00629_MAGBIO' => 'mbi', 'MBI09_g28076_MAGBIO' => 'mbi', 'MBI17_g42497_MAGBIO' => 'mbi', 'MCO09G631' => 'mco', 'MCO14G078' => 'mco', 'MD02G1040100' => 'mdo', 'MD03G1250900' => 'mdo', 'MD03G1251000' => 'mdo', 'MD03G1251100' => 'mdo', 'MD03G1251200' => 'mdo', 'MD04G1070000' => 'mdo', 'MD04G1070100' => 'mdo', 'MD04G1076800' => 'mdo', 'MD05G1158500' => 'mdo', 'MD10G1052000' => 'mdo', 'MD10G1151500' => 'mdo', 'MD11G1271200' => 'mdo', 'MD11G1271700' => 'mdo', 'MD11G1271800' => 'mdo', 'MD15G1145000' => 'mdo', 'Medtr2g073070' => 'mtr', 'Medtr2g073080' => 'mtr', 'Medtr2g073190' => 'mtr', 'Medtr2g078500' => 'mtr', 'Medtr4g113090' => 'mtr', 'Medtr5g011440' => 'mtr', 'Medtr5g011450' => 'mtr', 'Medtr7g053090' => 'mtr', 'MELO3C012726.2' => 'cme', 'MELO3C014000.2' => 'cme', 'MELO3C016503.2' => 'cme', 'MELO3C016505.2' => 'cme', 'MELO3C025304.2' => 'cme', 'MELO3C025675.2' => 'cme', 'MELO3C029124.2' => 'cme', 'Migut.A00837' => 'egut', 'Migut.A00874' => 'egut', 'Migut.M00688' => 'egut', 'Migut.N00666' => 'egut', 'Migut.N00828' => 'egut', 'MSTRG.12040' => 'ama', 'MSTRG.12057' => 'ama', 'MSTRG.14988' => 'ama', 'MSTRG.17970' => 'ama', 'MSTRG.25550' => 'ama', 'Nitab4.5_0000038g0160' => 'nta', 'Nitab4.5_0000092g0190' => 'nta', 'Nitab4.5_0000092g0330' => 'nta', 'Nitab4.5_0000432g0050' => 'nta', 'Nitab4.5_0000667g0060' => 'nta', 'Nitab4.5_0000787g0260' => 'nta', 'Nitab4.5_0001265g0140' => 'nta', 'Nitab4.5_0001386g0010' => 'nta', 'Nitab4.5_0001816g0080' => 'nta', 'Nitab4.5_0002550g0030' => 'nta', 'Nitab4.5_0004516g0020' => 'nta', 'Nitab4.5_0005122g0030' => 'nta', 'Nitab4.5_0005122g0040' => 'nta', 'Nitab4.5_0007295g0040' => 'nta', 'Nn1g01188' => 'nnu', 'Nn1g08270' => 'nnu', 'Nn2g10341' => 'nnu', 'Nn2g11861' => 'nnu', 'Nn3g20955' => 'nnu', 'Nn8g39317' => 'nnu', 'Nn8g40352' => 'nnu', 'Oeu010037.1' => 'oeu', 'Oeu010038.1' => 'oeu', 'Oeu018253.4' => 'oeu', 'Oeu048663.1' => 'oeu', 'Oeu049584.1' => 'oeu', 'Oeu049585.1' => 'oeu', 'Oeu049813.3' => 'oeu', 'Oeu057828.1' => 'oeu', 'Oeu064607.2' => 'oeu', 'Os01g0645200' => 'osa', 'Os02g0475400' => 'osa', 'Os04g0381100' => 'osa', 'Os09g0520600' => 'osa', 'Os12g0170300' => 'osa', 'Peaxi162Scf00000g76016' => 'pax', 'Peaxi162Scf00011g01123' => 'pax', 'Peaxi162Scf00044g01817' => 'pax', 'Peaxi162Scf00044g01826' => 'pax', 'Peaxi162Scf00047g02459' => 'pax', 'Peaxi162Scf00047g02462' => 'pax', 'Peaxi162Scf00102g01356' => 'pax', 'Peaxi162Scf00225g00623' => 'pax', 'Peaxi162Scf00335g00069' => 'pax', 'Peaxi162Scf02228g00005' => 'pax', 'PGR031G3430' => 'pgr', 'PGR042G3659' => 'pgr', 'PGR142G1561' => 'pgr', 'PGR142G1792' => 'pgr', 'PGSC0003DMG400001256' => 'stu', 'PGSC0003DMG400012516' => 'stu', 'PGSC0003DMG400019027' => 'stu', 'PGSC0003DMG400028882' => 'stu', 'Phvul.002G151900' => 'pvu', 'Phvul.003G159600' => 'pvu', 'Phvul.005G076100' => 'pvu', 'Phvul.005G078101' => 'pvu', 'Phvul.008G136700' => 'pvu', 'Potri.003G008700' => 'ptr', 'Potri.003G117300' => 'ptr', 'Potri.011G103200' => 'ptr', 'Potri.014G178000' => 'ptr', 'Potri.017G069350' => 'ptr', 'Potri.018G074400' => 'ptr', 'Pp3c14_2960' => 'ppa', 'Pp3c18_12460' => 'ppa', 'Pp3c20_2280' => 'ppa', 'Pp3c23_17660' => 'ppa', 'Pp3c5_7360' => 'ppa', 'Pp3c6_18611' => 'ppa', 'Pp3c6_19720' => 'ppa', 'Pp3c7_7830' => 'ppa', 'PRCOL_00000738' => 'pco', 'PRCOL_00003803' => 'pco', 'PRCOL_00004648' => 'pco', 'Prupe.1G578600' => 'ppe', 'Prupe.4G155400' => 'ppe', 'Prupe.4G251800' => 'ppe', 'Prupe.5G082600' => 'ppe', 'Prupe.5G099300' => 'ppe', 'Prupe.6G004300' => 'ppe', 'Prupe.7G235600' => 'ppe', 'Prupe.8G189900' => 'ppe', 'Psat0s3891g0080' => 'psa', 'Psat0s944g0200' => 'psa', 'Psat1g007560' => 'psa', 'Psat1g007600' => 'psa', 'Psat2g180440' => 'psa', 'Psat2g180480' => 'psa', 'PSO017G6369' => 'pso', 'PSO170G2819' => 'pso', 'PSO170G3630' => 'pso', 'PSO357G0694' => 'pso', 'PSO478G2124' => 'pso', 'PSO541G4101' => 'pso', 'PSO675G4586' => 'pso', 'PSO675G8358' => 'pso', 'PSO782G0848' => 'pso', 'QL02p086503' => 'qlo', 'QL02p100337' => 'qlo', 'QL09p046703' => 'qlo', 'QL12p015803' => 'qlo', 'QL93p0263_0060' => 'qlo', 'RcHm_v2.0_Chr1g0359741' => 'rch', 'RcHm_v2.0_Chr2g0089661' => 'rch', 'RcHm_v2.0_Chr5g0029301' => 'rch', 'RcHm_v2.0_Chr6g0282761' => 'rch', 'RcHm_v2.0_Chr6g0282771' => 'rch', 'RcHm_v2.0_Chr7g0200441' => 'rch', 'Rhsim01G0089900' => 'rsi', 'Rhsim04G0110500' => 'rsi', 'Rhsim05G0172400' => 'rsi', 'Rhsim13G0053000' => 'rsi', 'RhsimUnG0206100' => 'rsi', 'Sabra03G0004300' => 'sbr', 'Sabra03G0081700' => 'sbr', 'Sabra11G0077500' => 'sbr', 'Sabra11G0082400' => 'sbr', 'Sabra14G0136100' => 'sbr', 'Sabra18G0063400' => 'sbr', 'SalBow3G1699' => 'sbo', 'SalBow3G4188' => 'sbo', 'SalBow6G4468' => 'sbo', 'SalBow6G6325' => 'sbo', 'SalBow8G5603' => 'sbo', 'Sc01g0009070' => 'sci', 'Sc05g0001740' => 'sci', 'Sc07g0005160' => 'sci', 'Sc16g0007780' => 'sci', 'Sc18g0000940' => 'sci', 'Sed0007276' => 'sed', 'Sed0008675' => 'sed', 'Sed0011001' => 'sed', 'Sed0014303' => 'sed', 'Sed0016281' => 'sed', 'Sed0019845' => 'sed', 'SEGI_02510' => 'sgi', 'SEGI_05556' => 'sgi', 'SEGI_13894' => 'sgi', 'SEGI_19861' => 'sgi', 'SEGI_39487' => 'sgi', 'SGA_v2.0_scaffold120G32811' => 'sas', 'SGA_v2.0_scaffold37G14858' => 'sas', 'SGA_v2.0_scaffold42G15906' => 'sas', 'SGA_v2.0_scaffold73G24378' => 'sas', 'SGA_v2.0_scaffold77G25297' => 'sas', 'SHI03889' => 'shi', 'SMO143G0190' => 'smo', 'SMO146G0261' => 'smo', 'SMO230G0059' => 'smo', 'SMO367G0186' => 'smo', 'Solyc01g103620.4' => 'sly', 'Solyc05g017950.3' => 'sly', 'Solyc08g007590.3' => 'sly', 'Solyc09g055940.3' => 'sly', 'Solyc10g038090.1' => 'sly', 'Solyc10g038100.1' => 'sly', 'Solyc12g005410.2' => 'sly', 'Sopen01g045990' => 'spe', 'Sopen01g046020' => 'spe', 'Sopen01g046030' => 'spe', 'Sopen05g014570' => 'spe', 'Sopen09g021810' => 'spe', 'Sopen12g001380' => 'spe', 'Sp3g22950' => 'spa', 'Sp4g21150' => 'spa', 'Sp5g33650' => 'spa', 'Sp6g05480' => 'spa', 'Sp7g09790' => 'spa', 'Sp7g20900' => 'spa', 'TAR184G0001' => 'tar', 'TAR375G0451' => 'tar', 'TAR625G0148' => 'tar', 'TAR628G1147' => 'tar', 'TAR629G1459' => 'tar', 'THA.LOC104808812' => 'tha', 'THA.LOC104812302' => 'tha', 'THA.LOC104814036' => 'tha', 'THA.LOC104815245' => 'tha', 'THA.LOC104826532' => 'tha', 'Thecc.01G210500' => 'tca', 'Thecc.02G019300' => 'tca', 'Thecc.03G264500' => 'tca', 'Thecc.07G135000' => 'tca', 'Thecc.09G117500' => 'tca', 'Thhalv10002537m.g' => 'esa', 'Thhalv10016729m.g' => 'esa', 'Thhalv10018656m.g' => 'esa', 'Thhalv10025337m.g' => 'esa', 'Thhalv10028698m.g' => 'esa', 'TPR.G11051' => 'tpr', 'TPR.G19569' => 'tpr', 'TPR.G26797' => 'tpr', 'TPR.G26829' => 'tpr', 'TPR.G35008' => 'tpr', 'TWI15G0455' => 'twi', 'TWI18G0798' => 'twi', 'TWI32G0927' => 'twi', 'TWI38G0474' => 'twi', 'TWI59G1092' => 'twi', 'unitig_0.g415' => 'ugi', 'unitig_21.g20529' => 'ugi', 'unitig_22.g5484' => 'ugi', 'unitig_22.g6855' => 'ugi', 'unitig_62.g23077' => 'ugi', 'vmacro00215' => 'vma', 'vmacro02819' => 'vma', 'vmacro09420' => 'vma', 'vmacro19866' => 'vma', 'vmacro20679' => 'vma', 'VMungo1080G0497' => 'vmu', 'VMungo1080G0956' => 'vmu', 'VMungo1215G0078' => 'vmu', 'VMungo1215G2965' => 'vmu', 'VMungo1215G3122' => 'vmu', 'VMungo1383G2670' => 'vmu', 'Zm00001eb043270' => 'zma', 'Zm00001eb139050' => 'zma', 'Zm00001eb318760' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000943' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000943' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000943' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000943' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000943', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '636', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A03p29530' => 'bna', 'A03p53820' => 'bna', 'A04p29590' => 'bna', 'A05p07410' => 'bna', 'A07p06990' => 'bna', 'A07p43810' => 'bna', 'A09p27090' => 'bna', 'Aa31LG4G2400' => 'aar', 'Aa31LG4G2410' => 'aar', 'Aa31LG5G8880' => 'aar', 'Aa31LG6G4700' => 'aar', 'Aa31LG6G4910' => 'aar', 'Aa31LG9G10450' => 'aar', 'Aa31sc38G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2793' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2927' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.489' => 'aag', 'Actinidia01604' => 'ach', 'Actinidia02071' => 'ach', 'Actinidia03621' => 'ach', 'Actinidia09395' => 'ach', 'Actinidia14485' => 'ach', 'Actinidia23356' => 'ach', 'Actinidia30013' => 'ach', 'Ah.02g116300' => 'amhyb', 'Ah.02g128290' => 'amhyb', 'Ah.04g163940' => 'amhyb', 'Ah.09g227470' => 'amhyb', 'Ah.11g050980' => 'amhyb', 'AL2G38960' => 'aly', 'AL3G41280' => 'aly', 'AL4G20130' => 'aly', 'AL6G46830' => 'aly', 'AL7G30670' => 'aly', 'Aqoxy1G01881' => 'aox', 'Aqoxy5G00043' => 'aox', 'Aqoxy7G00587' => 'aox', 'Aqoxy7G01922' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1K7GD6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1RUKD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AQV2BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AVJ0IE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BUF90N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DI6VX2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P2VAYP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4LTZI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WT9QCD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X0ENSR' => 'arhy', 'AT1G78560' => 'ath', 'AT2G26900' => 'ath', 'AT3G25410' => 'ath', 'AT4G12030' => 'ath', 'AT4G22840' => 'ath', 'ATR0083G040' => 'atr', 'ATR0584G051' => 'atr', 'ATR0609G010' => 'atr', 'ATR0757G175' => 'atr', 'ATR0763G119' => 'atr', 'ATR0810G012' => 'atr', 'Atru.chr6.3542' => 'acertr', 'Atru.chr6.800' => 'acertr', 'Atru.chr7.1273' => 'acertr', 'Atru.chr9.1474' => 'acertr', 'AUR62001469' => 'cqu', 'AUR62008117' => 'cqu', 'AUR62010537' => 'cqu', 'AUR62011044' => 'cqu', 'AUR62013941' => 'cqu', 'AUR62017358' => 'cqu', 'AUR62019668' => 'cqu', 'AUR62028695' => 'cqu', 'AUR62033421' => 'cqu', 'BcaB01g01709' => 'bca', 'BcaB01g02661' => 'bca', 'BcaB02g09151' => 'bca', 'BcaB06g26742' => 'bca', 'BcaC01g04609' => 'bca', 'BcaC02g07446' => 'bca', 'BcaC04g21192' => 'bca', 'BcaC06g35809' => 'bca', 'BcaC08g47434' => 'bca', 'BcaNung01667' => 'bca', 'BcaNung06079' => 'bca', 'BcaNung06080' => 'bca', 'BolC3t15884H' => 'bol', 'BolC4t22476H' => 'bol', 'BolC4t28190H' => 'bol', 'BolC6t40265H' => 'bol', 'BolC7t41527H' => 'bol', 'BolC7t45715H' => 'bol', 'BolC9t56287H' => 'bol', 'BraA03t12148Z' => 'bra', 'BraA03t14451Z' => 'bra', 'BraA03t14607Z' => 'bra', 'BraA03t14608Z' => 'bra', 'BraA03t14610Z' => 'bra', 'BraA03t14612Z' => 'bra', 'BraA04t18424Z' => 'bra', 'BraA05t19707Z' => 'bra', 'BraA07t28489Z' => 'bra', 'BraA07t31890Z' => 'bra', 'BraA09t38280Z' => 'bra', 'C03p35740' => 'bna', 'C04p08880' => 'bna', 'C04p66880' => 'bna', 'C06p52460' => 'bna', 'C07p10620' => 'bna', 'C07p52200' => 'bna', 'C07p52220' => 'bna', 'C09p34440' => 'bna', 'CAN.G1101.3' => 'can', 'CAN.G1237.30' => 'can', 'CAN.G1394.23' => 'can', 'CAN.G2125.2' => 'can', 'CAN.G284.3' => 'can', 'CANSAT01G3037' => 'cansat', 'CANSAT35G0243' => 'cansat', 'CANSAT56G1032' => 'cansat', 'CANSAT56G4068' => 'cansat', 'CARHR072050' => 'chi', 'CARHR101710' => 'chi', 'CARHR119060' => 'chi', 'CARHR229870' => 'chi', 'CARHR254200' => 'chi', 'Carub.0002s2541' => 'cru', 'Carub.0003s2572' => 'cru', 'Carub.0004s0740' => 'cru', 'Carub.0006s3113' => 'cru', 'Carub.0007s1843' => 'cru', 'Ca_03924_v3' => 'car', 'Ca_06680_v3' => 'car', 'Ca_06681_v3' => 'car', 'Ca_07480_v3' => 'car', 'Ca_21720_v3' => 'car', 'Ca_23716_v3' => 'car', 'Ca_26967_v3' => 'car', 'CBR_g40022' => 'cbr', 'CBR_g40023' => 'cbr', 'Cc01_g16100' => 'ccan', 'Cc02_g23100' => 'ccan', 'Cc05_g10620' => 'ccan', 'Cc06_g09180' => 'ccan', 'Cc08_g13510' => 'ccan', 'CDE01G0021' => 'cde', 'CDE05G1302' => 'cde', 'CDE05G2171' => 'cde', 'CDE06G0292' => 'cde', 'CDE06G2531' => 'cde', 'CDE07G0438' => 'cde', 'CDE11G0956' => 'cde', 'Cfa003304' => 'cfa', 'Cfa004493' => 'cfa', 'Cfa010672' => 'cfa', 'Cfa012043' => 'cfa', 'Ciclev10001198m.g' => 'ccl', 'Ciclev10008416m.g' => 'ccl', 'Ciclev10015435m.g' => 'ccl', 'Ciclev10020318m.g' => 'ccl', 'Ciclev10020346m.g' => 'ccl', 'CiPaw.03G236900' => 'cil', 'CiPaw.05G005300' => 'cil', 'CiPaw.11G145100' => 'cil', 'CiPaw.12G110000' => 'cil', 'CiPaw.13G057400' => 'cil', 'ClCG00G000060' => 'cla', 'ClCG06G010520' => 'cla', 'ClCG09G008190' => 'cla', 'ClCG10G003310' => 'cla', 'ClCG10G007030' => 'cla', 'ClCG10G007050' => 'cla', 'ClCG11G017120' => 'cla', 'COL.COLO4_03605' => 'col', 'COL.COLO4_17731' => 'col', 'COL.COLO4_23836' => 'col', 'COL.COLO4_26566' => 'col', 'COL.COLO4_34960' => 'col', 'Cpa.g.sc113.50' => 'cpa', 'Cpa.g.sc1720.1' => 'cpa', 'Cpa.g.sc29.61' => 'cpa', 'Cpa.g.sc682.5' => 'cpa', 'Cpa.g.sc8.67' => 'cpa', 'Cre10.g448350' => 'cre', 'Cre12.g532500' => 'cre', 'Cre17.g725650' => 'cre', 'CsaV3_1G030990' => 'csa', 'CsaV3_3G003330' => 'csa', 'CsaV3_3G006360' => 'csa', 'CsaV3_3G006370' => 'csa', 'CsaV3_4G032780' => 'csa', 'CsaV3_7G026860' => 'csa', 'CSS0004534' => 'camsi', 'CSS0008690' => 'camsi', 'CSS0009276' => 'camsi', 'CSS0010557' => 'camsi', 'CSS0023217' => 'camsi', 'CSS0024707' => 'camsi', 'CSS0026808' => 'camsi', 'CSS0030160' => 'camsi', 'CSS0044087' => 'camsi', 'CSS0045366' => 'camsi', 'DCAR_006674' => 'dca', 'DCAR_006793' => 'dca', 'DCAR_012694' => 'dca', 'DCAR_017587' => 'dca', 'DCAR_020847' => 'dca', 'Dinv10444' => 'din', 'Dinv19403' => 'din', 'Dinv26700' => 'din', 'Dinv28808' => 'din', 'Dinv36591' => 'din', 'Dinv37739' => 'din', 'Dinv39055' => 'din', 'Dinv41560' => 'din', 'Duzib084G1296' => 'dzi', 'Duzib132G0520' => 'dzi', 'Duzib138G0240' => 'dzi', 'Duzib150G0624' => 'dzi', 'Duzib187G0454' => 'dzi', 'Duzib187G1914' => 'dzi', 'Duzib205G1220' => 'dzi', 'Duzib211G0104' => 'dzi', 'ECA234G0075' => 'eca', 'ECA234G0636' => 'eca', 'ECA240G1417' => 'eca', 'ECA240G3303' => 'eca', 'ECA247G1772' => 'eca', 'EL10Ac4g08437' => 'bvu', 'EL10Ac4g08445' => 'bvu', 'EL10Ac5g10622' => 'bvu', 'EL10Ac5g12655' => 'bvu', 'EL10Ac8g18562' => 'bvu', 'Eucgr.C01098' => 'egr', 'Eucgr.E00493' => 'egr', 'Eucgr.E00495' => 'egr', 'Eucgr.E00496' => 'egr', 'Eucgr.F03227' => 'egr', 'Eucgr.K02087' => 'egr', 'FAN04G0330' => 'fan', 'FAN08G1877' => 'fan', 'FAN11G0107' => 'fan', 'FAN13G3095' => 'fan', 'FAN15G3350' => 'fan', 'FAN16G1964' => 'fan', 'FAN18G1821' => 'fan', 'FAN19G2692' => 'fan', 'FAN21G2606' => 'fan', 'FAN24G2729' => 'fan', 'FAN25G0219' => 'fan', 'FAN26G1677' => 'fan', 'FAN27G0924' => 'fan', 'FAN27G2532' => 'fan', 'FAN28G0154' => 'fan', 'FvH4_1g04160' => 'fve', 'FvH4_2g17730' => 'fve', 'FvH4_3g17590' => 'fve', 'FvH4_5g00950' => 'fve', 'Glyma.01G213400' => 'gma', 'Glyma.03G041400' => 'gma', 'Glyma.05G011700' => 'gma', 'Glyma.08G344000' => 'gma', 'Glyma.11G028500' => 'gma', 'Glyma.12G234600' => 'gma', 'Glyma.13G264300' => 'gma', 'Glyma.17G119900' => 'gma', 'Gohir.A01G046900' => 'ghi', 'Gohir.A04G133050' => 'ghi', 'Gohir.A04G133500' => 'ghi', 'Gohir.A06G059400' => 'ghi', 'Gohir.A07G196600' => 'ghi', 'Gohir.A08G048000' => 'ghi', 'Gohir.A12G222600' => 'ghi', 'Gohir.A13G197200' => 'ghi', 'Gohir.D01G037600' => 'ghi', 'Gohir.D04G176600' => 'ghi', 'Gohir.D06G057600' => 'ghi', 'Gohir.D07G202900' => 'ghi', 'Gohir.D07G203000' => 'ghi', 'Gohir.D08G058100' => 'ghi', 'Gohir.D12G225100' => 'ghi', 'Gohir.D13G202500' => 'ghi', 'Gohir.D13G202650' => 'ghi', 'Gorai.001G228400' => 'gra', 'Gorai.002G045800' => 'gra', 'Gorai.003G059400' => 'gra', 'Gorai.004G059400' => 'gra', 'Gorai.004G059600' => 'gra', 'Gorai.004G059800' => 'gra', 'Gorai.004G060000' => 'gra', 'Gorai.008G241200' => 'gra', 'Gorai.010G067700' => 'gra', 'Gorai.011G136100' => 'gra', 'Gorai.012G168600' => 'gra', 'Gorai.012G169500' => 'gra', 'Gorai.013G231400' => 'gra', 'Gorai.013G231700' => 'gra', 'GSVIVG01003813001' => 'vvi', 'GSVIVG01014084001' => 'vvi', 'GSVIVG01014085001' => 'vvi', 'GSVIVG01015459001' => 'vvi', 'GSVIVG01023255001' => 'vvi', 'HanXRQChr01g0027191' => 'han', 'HanXRQChr03g0087371' => 'han', 'HanXRQChr07g0193281' => 'han', 'HanXRQChr08g0226421' => 'han', 'HanXRQChr08g0231881' => 'han', 'HanXRQChr09g0238611' => 'han', 'HanXRQChr09g0243901' => 'han', 'HanXRQChr10g0305601' => 'han', 'HanXRQChr12g0382021' => 'han', 'HanXRQChr13g0393571' => 'han', 'HanXRQChr13g0417211' => 'han', 'HanXRQChr13g0422401' => 'han', 'Haze_03598' => 'cav', 'Haze_08446' => 'cav', 'Haze_09024' => 'cav', 'Haze_09029' => 'cav', 'Haze_09034' => 'cav', 'Haze_10048' => 'cav', 'Haze_25657' => 'cav', 'Hma1.2p1_0018F.1_g013040' => 'hma', 'Hma1.2p1_0138F.1_g062960' => 'hma', 'Hma1.2p1_0161F.1_g071415' => 'hma', 'Hma1.2p1_2174F.1_g316050' => 'hma', 'HPP92_001547' => 'vpl', 'HPP92_008099' => 'vpl', 'HPP92_011385' => 'vpl', 'HPP92_018428' => 'vpl', 'HPP92_021804' => 'vpl', 'Hund09168' => 'sun', 'Hund09470' => 'sun', 'Hund10402' => 'sun', 'Hund14677' => 'sun', 'Hund15466' => 'sun', 'Lalb_Chr01g0016271' => 'lal', 'Lalb_Chr07g0178681' => 'lal', 'Lalb_Chr09g0324591' => 'lal', 'Lalb_Chr12g0197651' => 'lal', 'Lalb_Chr19g0126141' => 'lal', 'Lj1A101G44' => 'lonja', 'Lj1A822T51' => 'lonja', 'Lj1g0017934' => 'lja', 'Lj2C204T5' => 'lonja', 'Lj2g0012794' => 'lja', 'Lj2g0023300' => 'lja', 'Lj3g0014038' => 'lja', 'Lj4g0024728' => 'lja', 'Lj5A262G66' => 'lonja', 'Lj7A638T62' => 'lonja', 'Lsat_1_v5_gn_5_126301' => 'lsa', 'Lsat_1_v5_gn_6_88660' => 'lsa', 'Lsat_1_v5_gn_6_88680' => 'lsa', 'Lsat_1_v5_gn_6_88700' => 'lsa', 'Lsat_1_v5_gn_6_88720' => 'lsa', 'Lsat_1_v5_gn_9_120381' => 'lsa', 'Lsat_1_v5_gn_9_16381' => 'lsa', 'Manes.01G071200' => 'mes', 'Manes.03G078100' => 'mes', 'Manes.07G023600' => 'mes', 'Manes.10G118900' => 'mes', 'Manes.13G054700' => 'mes', 'Manes.16G063700' => 'mes', 'Mapoly0002s0291' => 'mpo', 'Mapoly0020s0121' => 'mpo', 'Mapoly0030s0051' => 'mpo', 'Mapoly0050s0070' => 'mpo', 'MBI01_g03565_MAGBIO' => 'mbi', 'MBI01_g45790_MAGBIO' => 'mbi', 'MBI02_g32395_MAGBIO' => 'mbi', 'MBI02_g32396_MAGBIO' => 'mbi', 'MBI04_g32263_MAGBIO' => 'mbi', 'MBI07_g00629_MAGBIO' => 'mbi', 'MBI09_g28076_MAGBIO' => 'mbi', 'MBI17_g42497_MAGBIO' => 'mbi', 'MCO09G631' => 'mco', 'MCO14G078' => 'mco', 'MD02G1040100' => 'mdo', 'MD03G1250900' => 'mdo', 'MD03G1251000' => 'mdo', 'MD03G1251100' => 'mdo', 'MD03G1251200' => 'mdo', 'MD04G1070000' => 'mdo', 'MD04G1070100' => 'mdo', 'MD04G1076800' => 'mdo', 'MD05G1158500' => 'mdo', 'MD10G1052000' => 'mdo', 'MD10G1151500' => 'mdo', 'MD11G1271200' => 'mdo', 'MD11G1271700' => 'mdo', 'MD11G1271800' => 'mdo', 'MD15G1145000' => 'mdo', 'Medtr2g073070' => 'mtr', 'Medtr2g073080' => 'mtr', 'Medtr2g073190' => 'mtr', 'Medtr2g078500' => 'mtr', 'Medtr4g113090' => 'mtr', 'Medtr5g011440' => 'mtr', 'Medtr5g011450' => 'mtr', 'Medtr7g053090' => 'mtr', 'MELO3C012726.2' => 'cme', 'MELO3C014000.2' => 'cme', 'MELO3C016503.2' => 'cme', 'MELO3C016505.2' => 'cme', 'MELO3C025304.2' => 'cme', 'MELO3C025675.2' => 'cme', 'MELO3C029124.2' => 'cme', 'Migut.A00837' => 'egut', 'Migut.A00874' => 'egut', 'Migut.M00688' => 'egut', 'Migut.N00666' => 'egut', 'Migut.N00828' => 'egut', 'MSTRG.12040' => 'ama', 'MSTRG.12057' => 'ama', 'MSTRG.14988' => 'ama', 'MSTRG.17970' => 'ama', 'MSTRG.25550' => 'ama', 'Nitab4.5_0000038g0160' => 'nta', 'Nitab4.5_0000092g0190' => 'nta', 'Nitab4.5_0000092g0330' => 'nta', 'Nitab4.5_0000432g0050' => 'nta', 'Nitab4.5_0000667g0060' => 'nta', 'Nitab4.5_0000787g0260' => 'nta', 'Nitab4.5_0001265g0140' => 'nta', 'Nitab4.5_0001386g0010' => 'nta', 'Nitab4.5_0001816g0080' => 'nta', 'Nitab4.5_0002550g0030' => 'nta', 'Nitab4.5_0004516g0020' => 'nta', 'Nitab4.5_0005122g0030' => 'nta', 'Nitab4.5_0005122g0040' => 'nta', 'Nitab4.5_0007295g0040' => 'nta', 'Nn1g01188' => 'nnu', 'Nn1g08270' => 'nnu', 'Nn2g10341' => 'nnu', 'Nn2g11861' => 'nnu', 'Nn3g20955' => 'nnu', 'Nn8g39317' => 'nnu', 'Nn8g40352' => 'nnu', 'Oeu010037.1' => 'oeu', 'Oeu010038.1' => 'oeu', 'Oeu018253.4' => 'oeu', 'Oeu048663.1' => 'oeu', 'Oeu049584.1' => 'oeu', 'Oeu049585.1' => 'oeu', 'Oeu049813.3' => 'oeu', 'Oeu057828.1' => 'oeu', 'Oeu064607.2' => 'oeu', 'Os01g0645200' => 'osa', 'Os02g0475400' => 'osa', 'Os04g0381100' => 'osa', 'Os09g0520600' => 'osa', 'Os12g0170300' => 'osa', 'Peaxi162Scf00000g76016' => 'pax', 'Peaxi162Scf00011g01123' => 'pax', 'Peaxi162Scf00044g01817' => 'pax', 'Peaxi162Scf00044g01826' => 'pax', 'Peaxi162Scf00047g02459' => 'pax', 'Peaxi162Scf00047g02462' => 'pax', 'Peaxi162Scf00102g01356' => 'pax', 'Peaxi162Scf00225g00623' => 'pax', 'Peaxi162Scf00335g00069' => 'pax', 'Peaxi162Scf02228g00005' => 'pax', 'PGR031G3430' => 'pgr', 'PGR042G3659' => 'pgr', 'PGR142G1561' => 'pgr', 'PGR142G1792' => 'pgr', 'PGSC0003DMG400001256' => 'stu', 'PGSC0003DMG400012516' => 'stu', 'PGSC0003DMG400019027' => 'stu', 'PGSC0003DMG400028882' => 'stu', 'Phvul.002G151900' => 'pvu', 'Phvul.003G159600' => 'pvu', 'Phvul.005G076100' => 'pvu', 'Phvul.005G078101' => 'pvu', 'Phvul.008G136700' => 'pvu', 'Potri.003G008700' => 'ptr', 'Potri.003G117300' => 'ptr', 'Potri.011G103200' => 'ptr', 'Potri.014G178000' => 'ptr', 'Potri.017G069350' => 'ptr', 'Potri.018G074400' => 'ptr', 'Pp3c14_2960' => 'ppa', 'Pp3c18_12460' => 'ppa', 'Pp3c20_2280' => 'ppa', 'Pp3c23_17660' => 'ppa', 'Pp3c5_7360' => 'ppa', 'Pp3c6_18611' => 'ppa', 'Pp3c6_19720' => 'ppa', 'Pp3c7_7830' => 'ppa', 'PRCOL_00000738' => 'pco', 'PRCOL_00003803' => 'pco', 'PRCOL_00004648' => 'pco', 'Prupe.1G578600' => 'ppe', 'Prupe.4G155400' => 'ppe', 'Prupe.4G251800' => 'ppe', 'Prupe.5G082600' => 'ppe', 'Prupe.5G099300' => 'ppe', 'Prupe.6G004300' => 'ppe', 'Prupe.7G235600' => 'ppe', 'Prupe.8G189900' => 'ppe', 'Psat0s3891g0080' => 'psa', 'Psat0s944g0200' => 'psa', 'Psat1g007560' => 'psa', 'Psat1g007600' => 'psa', 'Psat2g180440' => 'psa', 'Psat2g180480' => 'psa', 'PSO017G6369' => 'pso', 'PSO170G2819' => 'pso', 'PSO170G3630' => 'pso', 'PSO357G0694' => 'pso', 'PSO478G2124' => 'pso', 'PSO541G4101' => 'pso', 'PSO675G4586' => 'pso', 'PSO675G8358' => 'pso', 'PSO782G0848' => 'pso', 'QL02p086503' => 'qlo', 'QL02p100337' => 'qlo', 'QL09p046703' => 'qlo', 'QL12p015803' => 'qlo', 'QL93p0263_0060' => 'qlo', 'RcHm_v2.0_Chr1g0359741' => 'rch', 'RcHm_v2.0_Chr2g0089661' => 'rch', 'RcHm_v2.0_Chr5g0029301' => 'rch', 'RcHm_v2.0_Chr6g0282761' => 'rch', 'RcHm_v2.0_Chr6g0282771' => 'rch', 'RcHm_v2.0_Chr7g0200441' => 'rch', 'Rhsim01G0089900' => 'rsi', 'Rhsim04G0110500' => 'rsi', 'Rhsim05G0172400' => 'rsi', 'Rhsim13G0053000' => 'rsi', 'RhsimUnG0206100' => 'rsi', 'Sabra03G0004300' => 'sbr', 'Sabra03G0081700' => 'sbr', 'Sabra11G0077500' => 'sbr', 'Sabra11G0082400' => 'sbr', 'Sabra14G0136100' => 'sbr', 'Sabra18G0063400' => 'sbr', 'SalBow3G1699' => 'sbo', 'SalBow3G4188' => 'sbo', 'SalBow6G4468' => 'sbo', 'SalBow6G6325' => 'sbo', 'SalBow8G5603' => 'sbo', 'Sc01g0009070' => 'sci', 'Sc05g0001740' => 'sci', 'Sc07g0005160' => 'sci', 'Sc16g0007780' => 'sci', 'Sc18g0000940' => 'sci', 'Sed0007276' => 'sed', 'Sed0008675' => 'sed', 'Sed0011001' => 'sed', 'Sed0014303' => 'sed', 'Sed0016281' => 'sed', 'Sed0019845' => 'sed', 'SEGI_02510' => 'sgi', 'SEGI_05556' => 'sgi', 'SEGI_13894' => 'sgi', 'SEGI_19861' => 'sgi', 'SEGI_39487' => 'sgi', 'SGA_v2.0_scaffold120G32811' => 'sas', 'SGA_v2.0_scaffold37G14858' => 'sas', 'SGA_v2.0_scaffold42G15906' => 'sas', 'SGA_v2.0_scaffold73G24378' => 'sas', 'SGA_v2.0_scaffold77G25297' => 'sas', 'SHI03889' => 'shi', 'SMO143G0190' => 'smo', 'SMO146G0261' => 'smo', 'SMO230G0059' => 'smo', 'SMO367G0186' => 'smo', 'Solyc01g103620.4' => 'sly', 'Solyc05g017950.3' => 'sly', 'Solyc08g007590.3' => 'sly', 'Solyc09g055940.3' => 'sly', 'Solyc10g038090.1' => 'sly', 'Solyc10g038100.1' => 'sly', 'Solyc12g005410.2' => 'sly', 'Sopen01g045990' => 'spe', 'Sopen01g046020' => 'spe', 'Sopen01g046030' => 'spe', 'Sopen05g014570' => 'spe', 'Sopen09g021810' => 'spe', 'Sopen12g001380' => 'spe', 'Sp3g22950' => 'spa', 'Sp4g21150' => 'spa', 'Sp5g33650' => 'spa', 'Sp6g05480' => 'spa', 'Sp7g09790' => 'spa', 'Sp7g20900' => 'spa', 'TAR184G0001' => 'tar', 'TAR375G0451' => 'tar', 'TAR625G0148' => 'tar', 'TAR628G1147' => 'tar', 'TAR629G1459' => 'tar', 'THA.LOC104808812' => 'tha', 'THA.LOC104812302' => 'tha', 'THA.LOC104814036' => 'tha', 'THA.LOC104815245' => 'tha', 'THA.LOC104826532' => 'tha', 'Thecc.01G210500' => 'tca', 'Thecc.02G019300' => 'tca', 'Thecc.03G264500' => 'tca', 'Thecc.07G135000' => 'tca', 'Thecc.09G117500' => 'tca', 'Thhalv10002537m.g' => 'esa', 'Thhalv10016729m.g' => 'esa', 'Thhalv10018656m.g' => 'esa', 'Thhalv10025337m.g' => 'esa', 'Thhalv10028698m.g' => 'esa', 'TPR.G11051' => 'tpr', 'TPR.G19569' => 'tpr', 'TPR.G26797' => 'tpr', 'TPR.G26829' => 'tpr', 'TPR.G35008' => 'tpr', 'TWI15G0455' => 'twi', 'TWI18G0798' => 'twi', 'TWI32G0927' => 'twi', 'TWI38G0474' => 'twi', 'TWI59G1092' => 'twi', 'unitig_0.g415' => 'ugi', 'unitig_21.g20529' => 'ugi', 'unitig_22.g5484' => 'ugi', 'unitig_22.g6855' => 'ugi', 'unitig_62.g23077' => 'ugi', 'vmacro00215' => 'vma', 'vmacro02819' => 'vma', 'vmacro09420' => 'vma', 'vmacro19866' => 'vma', 'vmacro20679' => 'vma', 'VMungo1080G0497' => 'vmu', 'VMungo1080G0956' => 'vmu', 'VMungo1215G0078' => 'vmu', 'VMungo1215G2965' => 'vmu', 'VMungo1215G3122' => 'vmu', 'VMungo1383G2670' => 'vmu', 'Zm00001eb043270' => 'zma', 'Zm00001eb139050' => 'zma', 'Zm00001eb318760' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000943', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000943' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000943', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '636', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000943' ) ), 'genes' => array( 'A03p29530' => 'bna', 'A03p53820' => 'bna', 'A04p29590' => 'bna', 'A05p07410' => 'bna', 'A07p06990' => 'bna', 'A07p43810' => 'bna', 'A09p27090' => 'bna', 'Aa31LG4G2400' => 'aar', 'Aa31LG4G2410' => 'aar', 'Aa31LG5G8880' => 'aar', 'Aa31LG6G4700' => 'aar', 'Aa31LG6G4910' => 'aar', 'Aa31LG9G10450' => 'aar', 'Aa31sc38G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2793' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2927' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.489' => 'aag', 'Actinidia01604' => 'ach', 'Actinidia02071' => 'ach', 'Actinidia03621' => 'ach', 'Actinidia09395' => 'ach', 'Actinidia14485' => 'ach', 'Actinidia23356' => 'ach', 'Actinidia30013' => 'ach', 'Ah.02g116300' => 'amhyb', 'Ah.02g128290' => 'amhyb', 'Ah.04g163940' => 'amhyb', 'Ah.09g227470' => 'amhyb', 'Ah.11g050980' => 'amhyb', 'AL2G38960' => 'aly', 'AL3G41280' => 'aly', 'AL4G20130' => 'aly', 'AL6G46830' => 'aly', 'AL7G30670' => 'aly', 'Aqoxy1G01881' => 'aox', 'Aqoxy5G00043' => 'aox', 'Aqoxy7G00587' => 'aox', 'Aqoxy7G01922' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1K7GD6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1RUKD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AQV2BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AVJ0IE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BUF90N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DI6VX2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P2VAYP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4LTZI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WT9QCD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X0ENSR' => 'arhy', 'AT1G78560' => 'ath', 'AT2G26900' => 'ath', 'AT3G25410' => 'ath', 'AT4G12030' => 'ath', 'AT4G22840' => 'ath', 'ATR0083G040' => 'atr', 'ATR0584G051' => 'atr', 'ATR0609G010' => 'atr', 'ATR0757G175' => 'atr', 'ATR0763G119' => 'atr', 'ATR0810G012' => 'atr', 'Atru.chr6.3542' => 'acertr', 'Atru.chr6.800' => 'acertr', 'Atru.chr7.1273' => 'acertr', 'Atru.chr9.1474' => 'acertr', 'AUR62001469' => 'cqu', 'AUR62008117' => 'cqu', 'AUR62010537' => 'cqu', 'AUR62011044' => 'cqu', 'AUR62013941' => 'cqu', 'AUR62017358' => 'cqu', 'AUR62019668' => 'cqu', 'AUR62028695' => 'cqu', 'AUR62033421' => 'cqu', 'BcaB01g01709' => 'bca', 'BcaB01g02661' => 'bca', 'BcaB02g09151' => 'bca', 'BcaB06g26742' => 'bca', 'BcaC01g04609' => 'bca', 'BcaC02g07446' => 'bca', 'BcaC04g21192' => 'bca', 'BcaC06g35809' => 'bca', 'BcaC08g47434' => 'bca', 'BcaNung01667' => 'bca', 'BcaNung06079' => 'bca', 'BcaNung06080' => 'bca', 'BolC3t15884H' => 'bol', 'BolC4t22476H' => 'bol', 'BolC4t28190H' => 'bol', 'BolC6t40265H' => 'bol', 'BolC7t41527H' => 'bol', 'BolC7t45715H' => 'bol', 'BolC9t56287H' => 'bol', 'BraA03t12148Z' => 'bra', 'BraA03t14451Z' => 'bra', 'BraA03t14607Z' => 'bra', 'BraA03t14608Z' => 'bra', 'BraA03t14610Z' => 'bra', 'BraA03t14612Z' => 'bra', 'BraA04t18424Z' => 'bra', 'BraA05t19707Z' => 'bra', 'BraA07t28489Z' => 'bra', 'BraA07t31890Z' => 'bra', 'BraA09t38280Z' => 'bra', 'C03p35740' => 'bna', 'C04p08880' => 'bna', 'C04p66880' => 'bna', 'C06p52460' => 'bna', 'C07p10620' => 'bna', 'C07p52200' => 'bna', 'C07p52220' => 'bna', 'C09p34440' => 'bna', 'CAN.G1101.3' => 'can', 'CAN.G1237.30' => 'can', 'CAN.G1394.23' => 'can', 'CAN.G2125.2' => 'can', 'CAN.G284.3' => 'can', 'CANSAT01G3037' => 'cansat', 'CANSAT35G0243' => 'cansat', 'CANSAT56G1032' => 'cansat', 'CANSAT56G4068' => 'cansat', 'CARHR072050' => 'chi', 'CARHR101710' => 'chi', 'CARHR119060' => 'chi', 'CARHR229870' => 'chi', 'CARHR254200' => 'chi', 'Carub.0002s2541' => 'cru', 'Carub.0003s2572' => 'cru', 'Carub.0004s0740' => 'cru', 'Carub.0006s3113' => 'cru', 'Carub.0007s1843' => 'cru', 'Ca_03924_v3' => 'car', 'Ca_06680_v3' => 'car', 'Ca_06681_v3' => 'car', 'Ca_07480_v3' => 'car', 'Ca_21720_v3' => 'car', 'Ca_23716_v3' => 'car', 'Ca_26967_v3' => 'car', 'CBR_g40022' => 'cbr', 'CBR_g40023' => 'cbr', 'Cc01_g16100' => 'ccan', 'Cc02_g23100' => 'ccan', 'Cc05_g10620' => 'ccan', 'Cc06_g09180' => 'ccan', 'Cc08_g13510' => 'ccan', 'CDE01G0021' => 'cde', 'CDE05G1302' => 'cde', 'CDE05G2171' => 'cde', 'CDE06G0292' => 'cde', 'CDE06G2531' => 'cde', 'CDE07G0438' => 'cde', 'CDE11G0956' => 'cde', 'Cfa003304' => 'cfa', 'Cfa004493' => 'cfa', 'Cfa010672' => 'cfa', 'Cfa012043' => 'cfa', 'Ciclev10001198m.g' => 'ccl', 'Ciclev10008416m.g' => 'ccl', 'Ciclev10015435m.g' => 'ccl', 'Ciclev10020318m.g' => 'ccl', 'Ciclev10020346m.g' => 'ccl', 'CiPaw.03G236900' => 'cil', 'CiPaw.05G005300' => 'cil', 'CiPaw.11G145100' => 'cil', 'CiPaw.12G110000' => 'cil', 'CiPaw.13G057400' => 'cil', 'ClCG00G000060' => 'cla', 'ClCG06G010520' => 'cla', 'ClCG09G008190' => 'cla', 'ClCG10G003310' => 'cla', 'ClCG10G007030' => 'cla', 'ClCG10G007050' => 'cla', 'ClCG11G017120' => 'cla', 'COL.COLO4_03605' => 'col', 'COL.COLO4_17731' => 'col', 'COL.COLO4_23836' => 'col', 'COL.COLO4_26566' => 'col', 'COL.COLO4_34960' => 'col', 'Cpa.g.sc113.50' => 'cpa', 'Cpa.g.sc1720.1' => 'cpa', 'Cpa.g.sc29.61' => 'cpa', 'Cpa.g.sc682.5' => 'cpa', 'Cpa.g.sc8.67' => 'cpa', 'Cre10.g448350' => 'cre', 'Cre12.g532500' => 'cre', 'Cre17.g725650' => 'cre', 'CsaV3_1G030990' => 'csa', 'CsaV3_3G003330' => 'csa', 'CsaV3_3G006360' => 'csa', 'CsaV3_3G006370' => 'csa', 'CsaV3_4G032780' => 'csa', 'CsaV3_7G026860' => 'csa', 'CSS0004534' => 'camsi', 'CSS0008690' => 'camsi', 'CSS0009276' => 'camsi', 'CSS0010557' => 'camsi', 'CSS0023217' => 'camsi', 'CSS0024707' => 'camsi', 'CSS0026808' => 'camsi', 'CSS0030160' => 'camsi', 'CSS0044087' => 'camsi', 'CSS0045366' => 'camsi', 'DCAR_006674' => 'dca', 'DCAR_006793' => 'dca', 'DCAR_012694' => 'dca', 'DCAR_017587' => 'dca', 'DCAR_020847' => 'dca', 'Dinv10444' => 'din', 'Dinv19403' => 'din', 'Dinv26700' => 'din', 'Dinv28808' => 'din', 'Dinv36591' => 'din', 'Dinv37739' => 'din', 'Dinv39055' => 'din', 'Dinv41560' => 'din', 'Duzib084G1296' => 'dzi', 'Duzib132G0520' => 'dzi', 'Duzib138G0240' => 'dzi', 'Duzib150G0624' => 'dzi', 'Duzib187G0454' => 'dzi', 'Duzib187G1914' => 'dzi', 'Duzib205G1220' => 'dzi', 'Duzib211G0104' => 'dzi', 'ECA234G0075' => 'eca', 'ECA234G0636' => 'eca', 'ECA240G1417' => 'eca', 'ECA240G3303' => 'eca', 'ECA247G1772' => 'eca', 'EL10Ac4g08437' => 'bvu', 'EL10Ac4g08445' => 'bvu', 'EL10Ac5g10622' => 'bvu', 'EL10Ac5g12655' => 'bvu', 'EL10Ac8g18562' => 'bvu', 'Eucgr.C01098' => 'egr', 'Eucgr.E00493' => 'egr', 'Eucgr.E00495' => 'egr', 'Eucgr.E00496' => 'egr', 'Eucgr.F03227' => 'egr', 'Eucgr.K02087' => 'egr', 'FAN04G0330' => 'fan', 'FAN08G1877' => 'fan', 'FAN11G0107' => 'fan', 'FAN13G3095' => 'fan', 'FAN15G3350' => 'fan', 'FAN16G1964' => 'fan', 'FAN18G1821' => 'fan', 'FAN19G2692' => 'fan', 'FAN21G2606' => 'fan', 'FAN24G2729' => 'fan', 'FAN25G0219' => 'fan', 'FAN26G1677' => 'fan', 'FAN27G0924' => 'fan', 'FAN27G2532' => 'fan', 'FAN28G0154' => 'fan', 'FvH4_1g04160' => 'fve', 'FvH4_2g17730' => 'fve', 'FvH4_3g17590' => 'fve', 'FvH4_5g00950' => 'fve', 'Glyma.01G213400' => 'gma', 'Glyma.03G041400' => 'gma', 'Glyma.05G011700' => 'gma', 'Glyma.08G344000' => 'gma', 'Glyma.11G028500' => 'gma', 'Glyma.12G234600' => 'gma', 'Glyma.13G264300' => 'gma', 'Glyma.17G119900' => 'gma', 'Gohir.A01G046900' => 'ghi', 'Gohir.A04G133050' => 'ghi', 'Gohir.A04G133500' => 'ghi', 'Gohir.A06G059400' => 'ghi', 'Gohir.A07G196600' => 'ghi', 'Gohir.A08G048000' => 'ghi', 'Gohir.A12G222600' => 'ghi', 'Gohir.A13G197200' => 'ghi', 'Gohir.D01G037600' => 'ghi', 'Gohir.D04G176600' => 'ghi', 'Gohir.D06G057600' => 'ghi', 'Gohir.D07G202900' => 'ghi', 'Gohir.D07G203000' => 'ghi', 'Gohir.D08G058100' => 'ghi', 'Gohir.D12G225100' => 'ghi', 'Gohir.D13G202500' => 'ghi', 'Gohir.D13G202650' => 'ghi', 'Gorai.001G228400' => 'gra', 'Gorai.002G045800' => 'gra', 'Gorai.003G059400' => 'gra', 'Gorai.004G059400' => 'gra', 'Gorai.004G059600' => 'gra', 'Gorai.004G059800' => 'gra', 'Gorai.004G060000' => 'gra', 'Gorai.008G241200' => 'gra', 'Gorai.010G067700' => 'gra', 'Gorai.011G136100' => 'gra', 'Gorai.012G168600' => 'gra', 'Gorai.012G169500' => 'gra', 'Gorai.013G231400' => 'gra', 'Gorai.013G231700' => 'gra', 'GSVIVG01003813001' => 'vvi', 'GSVIVG01014084001' => 'vvi', 'GSVIVG01014085001' => 'vvi', 'GSVIVG01015459001' => 'vvi', 'GSVIVG01023255001' => 'vvi', 'HanXRQChr01g0027191' => 'han', 'HanXRQChr03g0087371' => 'han', 'HanXRQChr07g0193281' => 'han', 'HanXRQChr08g0226421' => 'han', 'HanXRQChr08g0231881' => 'han', 'HanXRQChr09g0238611' => 'han', 'HanXRQChr09g0243901' => 'han', 'HanXRQChr10g0305601' => 'han', 'HanXRQChr12g0382021' => 'han', 'HanXRQChr13g0393571' => 'han', 'HanXRQChr13g0417211' => 'han', 'HanXRQChr13g0422401' => 'han', 'Haze_03598' => 'cav', 'Haze_08446' => 'cav', 'Haze_09024' => 'cav', 'Haze_09029' => 'cav', 'Haze_09034' => 'cav', 'Haze_10048' => 'cav', 'Haze_25657' => 'cav', 'Hma1.2p1_0018F.1_g013040' => 'hma', 'Hma1.2p1_0138F.1_g062960' => 'hma', 'Hma1.2p1_0161F.1_g071415' => 'hma', 'Hma1.2p1_2174F.1_g316050' => 'hma', 'HPP92_001547' => 'vpl', 'HPP92_008099' => 'vpl', 'HPP92_011385' => 'vpl', 'HPP92_018428' => 'vpl', 'HPP92_021804' => 'vpl', 'Hund09168' => 'sun', 'Hund09470' => 'sun', 'Hund10402' => 'sun', 'Hund14677' => 'sun', 'Hund15466' => 'sun', 'Lalb_Chr01g0016271' => 'lal', 'Lalb_Chr07g0178681' => 'lal', 'Lalb_Chr09g0324591' => 'lal', 'Lalb_Chr12g0197651' => 'lal', 'Lalb_Chr19g0126141' => 'lal', 'Lj1A101G44' => 'lonja', 'Lj1A822T51' => 'lonja', 'Lj1g0017934' => 'lja', 'Lj2C204T5' => 'lonja', 'Lj2g0012794' => 'lja', 'Lj2g0023300' => 'lja', 'Lj3g0014038' => 'lja', 'Lj4g0024728' => 'lja', 'Lj5A262G66' => 'lonja', 'Lj7A638T62' => 'lonja', 'Lsat_1_v5_gn_5_126301' => 'lsa', 'Lsat_1_v5_gn_6_88660' => 'lsa', 'Lsat_1_v5_gn_6_88680' => 'lsa', 'Lsat_1_v5_gn_6_88700' => 'lsa', 'Lsat_1_v5_gn_6_88720' => 'lsa', 'Lsat_1_v5_gn_9_120381' => 'lsa', 'Lsat_1_v5_gn_9_16381' => 'lsa', 'Manes.01G071200' => 'mes', 'Manes.03G078100' => 'mes', 'Manes.07G023600' => 'mes', 'Manes.10G118900' => 'mes', 'Manes.13G054700' => 'mes', 'Manes.16G063700' => 'mes', 'Mapoly0002s0291' => 'mpo', 'Mapoly0020s0121' => 'mpo', 'Mapoly0030s0051' => 'mpo', 'Mapoly0050s0070' => 'mpo', 'MBI01_g03565_MAGBIO' => 'mbi', 'MBI01_g45790_MAGBIO' => 'mbi', 'MBI02_g32395_MAGBIO' => 'mbi', 'MBI02_g32396_MAGBIO' => 'mbi', 'MBI04_g32263_MAGBIO' => 'mbi', 'MBI07_g00629_MAGBIO' => 'mbi', 'MBI09_g28076_MAGBIO' => 'mbi', 'MBI17_g42497_MAGBIO' => 'mbi', 'MCO09G631' => 'mco', 'MCO14G078' => 'mco', 'MD02G1040100' => 'mdo', 'MD03G1250900' => 'mdo', 'MD03G1251000' => 'mdo', 'MD03G1251100' => 'mdo', 'MD03G1251200' => 'mdo', 'MD04G1070000' => 'mdo', 'MD04G1070100' => 'mdo', 'MD04G1076800' => 'mdo', 'MD05G1158500' => 'mdo', 'MD10G1052000' => 'mdo', 'MD10G1151500' => 'mdo', 'MD11G1271200' => 'mdo', 'MD11G1271700' => 'mdo', 'MD11G1271800' => 'mdo', 'MD15G1145000' => 'mdo', 'Medtr2g073070' => 'mtr', 'Medtr2g073080' => 'mtr', 'Medtr2g073190' => 'mtr', 'Medtr2g078500' => 'mtr', 'Medtr4g113090' => 'mtr', 'Medtr5g011440' => 'mtr', 'Medtr5g011450' => 'mtr', 'Medtr7g053090' => 'mtr', 'MELO3C012726.2' => 'cme', 'MELO3C014000.2' => 'cme', 'MELO3C016503.2' => 'cme', 'MELO3C016505.2' => 'cme', 'MELO3C025304.2' => 'cme', 'MELO3C025675.2' => 'cme', 'MELO3C029124.2' => 'cme', 'Migut.A00837' => 'egut', 'Migut.A00874' => 'egut', 'Migut.M00688' => 'egut', 'Migut.N00666' => 'egut', 'Migut.N00828' => 'egut', 'MSTRG.12040' => 'ama', 'MSTRG.12057' => 'ama', 'MSTRG.14988' => 'ama', 'MSTRG.17970' => 'ama', 'MSTRG.25550' => 'ama', 'Nitab4.5_0000038g0160' => 'nta', 'Nitab4.5_0000092g0190' => 'nta', 'Nitab4.5_0000092g0330' => 'nta', 'Nitab4.5_0000432g0050' => 'nta', 'Nitab4.5_0000667g0060' => 'nta', 'Nitab4.5_0000787g0260' => 'nta', 'Nitab4.5_0001265g0140' => 'nta', 'Nitab4.5_0001386g0010' => 'nta', 'Nitab4.5_0001816g0080' => 'nta', 'Nitab4.5_0002550g0030' => 'nta', 'Nitab4.5_0004516g0020' => 'nta', 'Nitab4.5_0005122g0030' => 'nta', 'Nitab4.5_0005122g0040' => 'nta', 'Nitab4.5_0007295g0040' => 'nta', 'Nn1g01188' => 'nnu', 'Nn1g08270' => 'nnu', 'Nn2g10341' => 'nnu', 'Nn2g11861' => 'nnu', 'Nn3g20955' => 'nnu', 'Nn8g39317' => 'nnu', 'Nn8g40352' => 'nnu', 'Oeu010037.1' => 'oeu', 'Oeu010038.1' => 'oeu', 'Oeu018253.4' => 'oeu', 'Oeu048663.1' => 'oeu', 'Oeu049584.1' => 'oeu', 'Oeu049585.1' => 'oeu', 'Oeu049813.3' => 'oeu', 'Oeu057828.1' => 'oeu', 'Oeu064607.2' => 'oeu', 'Os01g0645200' => 'osa', 'Os02g0475400' => 'osa', 'Os04g0381100' => 'osa', 'Os09g0520600' => 'osa', 'Os12g0170300' => 'osa', 'Peaxi162Scf00000g76016' => 'pax', 'Peaxi162Scf00011g01123' => 'pax', 'Peaxi162Scf00044g01817' => 'pax', 'Peaxi162Scf00044g01826' => 'pax', 'Peaxi162Scf00047g02459' => 'pax', 'Peaxi162Scf00047g02462' => 'pax', 'Peaxi162Scf00102g01356' => 'pax', 'Peaxi162Scf00225g00623' => 'pax', 'Peaxi162Scf00335g00069' => 'pax', 'Peaxi162Scf02228g00005' => 'pax', 'PGR031G3430' => 'pgr', 'PGR042G3659' => 'pgr', 'PGR142G1561' => 'pgr', 'PGR142G1792' => 'pgr', 'PGSC0003DMG400001256' => 'stu', 'PGSC0003DMG400012516' => 'stu', 'PGSC0003DMG400019027' => 'stu', 'PGSC0003DMG400028882' => 'stu', 'Phvul.002G151900' => 'pvu', 'Phvul.003G159600' => 'pvu', 'Phvul.005G076100' => 'pvu', 'Phvul.005G078101' => 'pvu', 'Phvul.008G136700' => 'pvu', 'Potri.003G008700' => 'ptr', 'Potri.003G117300' => 'ptr', 'Potri.011G103200' => 'ptr', 'Potri.014G178000' => 'ptr', 'Potri.017G069350' => 'ptr', 'Potri.018G074400' => 'ptr', 'Pp3c14_2960' => 'ppa', 'Pp3c18_12460' => 'ppa', 'Pp3c20_2280' => 'ppa', 'Pp3c23_17660' => 'ppa', 'Pp3c5_7360' => 'ppa', 'Pp3c6_18611' => 'ppa', 'Pp3c6_19720' => 'ppa', 'Pp3c7_7830' => 'ppa', 'PRCOL_00000738' => 'pco', 'PRCOL_00003803' => 'pco', 'PRCOL_00004648' => 'pco', 'Prupe.1G578600' => 'ppe', 'Prupe.4G155400' => 'ppe', 'Prupe.4G251800' => 'ppe', 'Prupe.5G082600' => 'ppe', 'Prupe.5G099300' => 'ppe', 'Prupe.6G004300' => 'ppe', 'Prupe.7G235600' => 'ppe', 'Prupe.8G189900' => 'ppe', 'Psat0s3891g0080' => 'psa', 'Psat0s944g0200' => 'psa', 'Psat1g007560' => 'psa', 'Psat1g007600' => 'psa', 'Psat2g180440' => 'psa', 'Psat2g180480' => 'psa', 'PSO017G6369' => 'pso', 'PSO170G2819' => 'pso', 'PSO170G3630' => 'pso', 'PSO357G0694' => 'pso', 'PSO478G2124' => 'pso', 'PSO541G4101' => 'pso', 'PSO675G4586' => 'pso', 'PSO675G8358' => 'pso', 'PSO782G0848' => 'pso', 'QL02p086503' => 'qlo', 'QL02p100337' => 'qlo', 'QL09p046703' => 'qlo', 'QL12p015803' => 'qlo', 'QL93p0263_0060' => 'qlo', 'RcHm_v2.0_Chr1g0359741' => 'rch', 'RcHm_v2.0_Chr2g0089661' => 'rch', 'RcHm_v2.0_Chr5g0029301' => 'rch', 'RcHm_v2.0_Chr6g0282761' => 'rch', 'RcHm_v2.0_Chr6g0282771' => 'rch', 'RcHm_v2.0_Chr7g0200441' => 'rch', 'Rhsim01G0089900' => 'rsi', 'Rhsim04G0110500' => 'rsi', 'Rhsim05G0172400' => 'rsi', 'Rhsim13G0053000' => 'rsi', 'RhsimUnG0206100' => 'rsi', 'Sabra03G0004300' => 'sbr', 'Sabra03G0081700' => 'sbr', 'Sabra11G0077500' => 'sbr', 'Sabra11G0082400' => 'sbr', 'Sabra14G0136100' => 'sbr', 'Sabra18G0063400' => 'sbr', 'SalBow3G1699' => 'sbo', 'SalBow3G4188' => 'sbo', 'SalBow6G4468' => 'sbo', 'SalBow6G6325' => 'sbo', 'SalBow8G5603' => 'sbo', 'Sc01g0009070' => 'sci', 'Sc05g0001740' => 'sci', 'Sc07g0005160' => 'sci', 'Sc16g0007780' => 'sci', 'Sc18g0000940' => 'sci', 'Sed0007276' => 'sed', 'Sed0008675' => 'sed', 'Sed0011001' => 'sed', 'Sed0014303' => 'sed', 'Sed0016281' => 'sed', 'Sed0019845' => 'sed', 'SEGI_02510' => 'sgi', 'SEGI_05556' => 'sgi', 'SEGI_13894' => 'sgi', 'SEGI_19861' => 'sgi', 'SEGI_39487' => 'sgi', 'SGA_v2.0_scaffold120G32811' => 'sas', 'SGA_v2.0_scaffold37G14858' => 'sas', 'SGA_v2.0_scaffold42G15906' => 'sas', 'SGA_v2.0_scaffold73G24378' => 'sas', 'SGA_v2.0_scaffold77G25297' => 'sas', 'SHI03889' => 'shi', 'SMO143G0190' => 'smo', 'SMO146G0261' => 'smo', 'SMO230G0059' => 'smo', 'SMO367G0186' => 'smo', 'Solyc01g103620.4' => 'sly', 'Solyc05g017950.3' => 'sly', 'Solyc08g007590.3' => 'sly', 'Solyc09g055940.3' => 'sly', 'Solyc10g038090.1' => 'sly', 'Solyc10g038100.1' => 'sly', 'Solyc12g005410.2' => 'sly', 'Sopen01g045990' => 'spe', 'Sopen01g046020' => 'spe', 'Sopen01g046030' => 'spe', 'Sopen05g014570' => 'spe', 'Sopen09g021810' => 'spe', 'Sopen12g001380' => 'spe', 'Sp3g22950' => 'spa', 'Sp4g21150' => 'spa', 'Sp5g33650' => 'spa', 'Sp6g05480' => 'spa', 'Sp7g09790' => 'spa', 'Sp7g20900' => 'spa', 'TAR184G0001' => 'tar', 'TAR375G0451' => 'tar', 'TAR625G0148' => 'tar', 'TAR628G1147' => 'tar', 'TAR629G1459' => 'tar', 'THA.LOC104808812' => 'tha', 'THA.LOC104812302' => 'tha', 'THA.LOC104814036' => 'tha', 'THA.LOC104815245' => 'tha', 'THA.LOC104826532' => 'tha', 'Thecc.01G210500' => 'tca', 'Thecc.02G019300' => 'tca', 'Thecc.03G264500' => 'tca', 'Thecc.07G135000' => 'tca', 'Thecc.09G117500' => 'tca', 'Thhalv10002537m.g' => 'esa', 'Thhalv10016729m.g' => 'esa', 'Thhalv10018656m.g' => 'esa', 'Thhalv10025337m.g' => 'esa', 'Thhalv10028698m.g' => 'esa', 'TPR.G11051' => 'tpr', 'TPR.G19569' => 'tpr', 'TPR.G26797' => 'tpr', 'TPR.G26829' => 'tpr', 'TPR.G35008' => 'tpr', 'TWI15G0455' => 'twi', 'TWI18G0798' => 'twi', 'TWI32G0927' => 'twi', 'TWI38G0474' => 'twi', 'TWI59G1092' => 'twi', 'unitig_0.g415' => 'ugi', 'unitig_21.g20529' => 'ugi', 'unitig_22.g5484' => 'ugi', 'unitig_22.g6855' => 'ugi', 'unitig_62.g23077' => 'ugi', 'vmacro00215' => 'vma', 'vmacro02819' => 'vma', 'vmacro09420' => 'vma', 'vmacro19866' => 'vma', 'vmacro20679' => 'vma', 'VMungo1080G0497' => 'vmu', 'VMungo1080G0956' => 'vmu', 'VMungo1215G0078' => 'vmu', 'VMungo1215G2965' => 'vmu', 'VMungo1215G3122' => 'vmu', 'VMungo1383G2670' => 'vmu', 'Zm00001eb043270' => 'zma', 'Zm00001eb139050' => 'zma', 'Zm00001eb318760' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000943' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000943' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000943' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000943' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151