Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g045790 Solanum pennellii HOM05D000974 ORTHO05D006000 2.3e-298 1028.1 515 100.0
PGSC0003DMG400024886 Solanum tuberosum HOM05D000974 ORTHO05D006000 4.3e-292 1007.3 515 98.1
Solyc01g103440.3 Solanum lycopersicum HOM05D000974 ORTHO05D006000 5.6e-292 1006.9 515 98.3
Peaxi162Scf00011g01426 Petunia axillaris HOM05D000974 ORTHO05D006000 1.4e-271 939.1 516 90.1
CAN.G855.13 Capsicum annuum HOM05D000974 ORTHO05D006000 1.1e-266 922.9 519 90.6
Nitab4.5_0003816g0050 Nicotiana tabacum HOM05D000974 ORTHO05D006000 5.4e-263 910.6 516 89.0
Nitab4.5_0002347g0020 Nicotiana tabacum HOM05D000974 ORTHO05D006000 7.9e-262 906.7 516 89.1
Dinv29601 Davidia involucrata HOM05D000974 ORTHO05D006000 3.8e-232 808.1 523 78.6
Dinv19422 Davidia involucrata HOM05D000974 ORTHO05D006000 1.2e-230 803.1 522 78.5
Rhsim07G0227600 Rhododendron simsii HOM05D000974 ORTHO05D006000 8.2e-227 790.4 524 77.5
CSS0025059 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 7.0e-226 787.3 523 76.7
vmacro01708 Vaccinium macrocarpon HOM05D000974 ORTHO05D006000 9.1e-226 786.9 472 82.2
Lj5C267T12 Lonicera japonica HOM05D000974 ORTHO05D006000 1.2e-225 786.6 524 77.3
Rhsim07G0227800 Rhododendron simsii HOM05D000974 ORTHO05D006000 4.5e-225 784.6 524 76.7
COL.COLO4_17713 Corchorus olitorius HOM05D000974 ORTHO05D006000 1.0e-224 783.5 530 76.0
Cc02_g23270 Coffea canephora HOM05D000974 ORTHO05D006000 2.9e-224 781.9 518 76.4
DCAR_006665 Daucus carota HOM05D000974 ORTHO05D006000 2.9e-224 781.9 520 77.3
CANSAT54G1032 Cannabis sativa HOM05D000974 ORTHO05D006000 1.2e-222 776.5 516 76.4
CSS0010237 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 1.6e-222 776.2 523 76.1
Ciclev10000877m.g Citrus clementina HOM05D000974 ORTHO05D006000 1.6e-222 776.2 517 76.8
Atru.chr9.317 Acer truncatum HOM05D000974 ORTHO05D006000 3.6e-222 775.0 447 85.0
Thecc.02G017200 Theobroma cacao HOM05D000974 ORTHO05D006000 3.6e-222 775.0 481 80.2
Duzib132G0946 Durio zibethinus HOM05D000974 ORTHO05D006000 1.8e-221 772.7 441 84.6
Ca_04891_v3 Cicer arietinum L. HOM05D000974 ORTHO05D006000 6.7e-221 770.8 441 84.8
Gorai.008G045600 Gossypium raimondii HOM05D000974 ORTHO05D006000 8.8e-221 770.4 447 83.7
Atru.chr1.4075 Acer truncatum HOM05D000974 ORTHO05D006000 1.1e-220 770.0 530 75.5
Manes.07G025100 Manihot esculenta HOM05D000974 ORTHO05D006000 1.5e-220 769.6 531 74.8
MSTRG.5204 Avicennia marina HOM05D000974 ORTHO05D006000 3.3e-220 768.5 491 79.2
Gohir.D12G043400 Gossypium hirsutum HOM05D000974 ORTHO05D006000 1.3e-219 766.5 447 83.0
Duzib052G0127 Durio zibethinus HOM05D000974 ORTHO05D006000 6.3e-219 764.2 478 79.3
GSVIVG01038784001 Vitis vinifera HOM05D000974 ORTHO05D006000 8.2e-219 763.8 524 74.0
Potri.004G225500 Populus trichocarpa HOM05D000974 ORTHO05D006000 1.8e-218 762.7 439 84.7
Psat2g146560 Pisum sativum HOM05D000974 ORTHO05D006000 3.1e-218 761.9 441 84.1
Rhsim11G0122100 Rhododendron simsii HOM05D000974 ORTHO05D006000 9.1e-218 760.4 449 84.0
ClCG10G007320 Citrullus lanatus HOM05D000974 ORTHO05D006000 4.5e-217 758.1 533 73.2
Phvul.007G182100 Phaseolus vulgaris HOM05D000974 ORTHO05D006000 5.9e-217 757.7 446 82.7
Glyma.10G156900 Glycine max HOM05D000974 ORTHO05D006000 2.9e-216 755.4 527 72.9
MELO3C016483.2 Cucumis melo HOM05D000974 ORTHO05D006000 8.5e-216 753.8 534 72.5
Cpa.g.sc113.32 Carica papaya HOM05D000974 ORTHO05D006000 1.5e-215 753.1 438 83.6
CsaV3_3G006560 Cucumis sativus L. HOM05D000974 ORTHO05D006000 1.5e-215 753.1 533 72.2
Medtr5g025310 Medicago truncatula HOM05D000974 ORTHO05D006000 2.5e-215 752.3 441 82.8
VMungo0720G1793 Vigna mungo HOM05D000974 ORTHO05D006000 2.5e-215 752.3 446 81.8
Ca_12589_v3 Cicer arietinum L. HOM05D000974 ORTHO05D006000 5.5e-215 751.1 438 84.0
Nn5g27502 Nelumbo nucifera HOM05D000974 ORTHO05D006000 5.5e-215 751.1 435 83.0
TAR381G1040 Trochodendron aralioides HOM05D000974 ORTHO05D006000 7.2e-215 750.7 530 74.0
ECA236G4964 Erigeron canadensis HOM05D000974 ORTHO05D006000 1.2e-214 750.0 451 80.9
Sed0019412 Sechium edule HOM05D000974 ORTHO05D006000 1.2e-214 750.0 465 79.6
HanXRQChr11g0329691 Helianthus annuus HOM05D000974 ORTHO05D006000 3.6e-214 748.4 459 79.3
QL02p100861 Quercus lobata HOM05D000974 ORTHO05D006000 6.1e-214 747.7 442 82.4
Cfa004480 Carpinus fangiana HOM05D000974 ORTHO05D006000 6.7e-213 744.2 424 84.7
AUR62020045 Chenopodium quinoa HOM05D000974 ORTHO05D006000 1.2e-212 743.4 438 82.0
TWI15G1214 Tripterygium wilfordii HOM05D000974 ORTHO05D006000 1.2e-212 743.4 534 71.3
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 2.0e-212 742.7 443 82.8
MBI06_g06706_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D006000 2.6e-212 742.3 525 73.0
THA.LOC104816816 Tarenaya hassleriana HOM05D000974 ORTHO05D006000 5.7e-212 741.1 500 74.6
PGR142G3566 Punica granatum HOM05D000974 ORTHO05D006000 1.7e-211 739.6 439 83.1
THA.LOC104816783 Tarenaya hassleriana HOM05D000974 ORTHO05D006000 1.7e-211 739.6 489 75.9
TPR.G5252 Trifolium pratense HOM05D000974 ORTHO05D006000 2.8e-211 738.8 444 82.2
AUR62001730 Chenopodium quinoa HOM05D000974 ORTHO05D006000 3.7e-211 738.4 438 81.7
Haze_10037 Corylus avellana HOM05D000974 ORTHO05D006000 3.7e-211 738.4 424 84.4
Gohir.A01G185000 Gossypium hirsutum HOM05D000974 ORTHO05D006000 3.7e-211 738.4 430 82.8
Eucgr.I02775 Eucalyptus grandis HOM05D000974 ORTHO05D006000 6.3e-211 737.6 422 85.3
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 8.2e-211 737.3 512 75.0
Ah.08g220180 Amaranthus hybridus HOM05D000974 ORTHO05D006000 1.8e-210 736.1 439 82.2
Lsat_1_v5_gn_7_76800 Lactuca sativa HOM05D000974 ORTHO05D006000 3.1e-210 735.3 516 72.7
HPP92_001871 Vanilla planifolia HOM05D000974 ORTHO05D006000 4.1e-210 734.9 432 82.6
Sabra01G0171200 Salix brachista HOM05D000974 ORTHO05D006000 5.3e-210 734.6 554 69.3
Prupe.1G580800 Prunus persica HOM05D000974 ORTHO05D006000 9.1e-210 733.8 425 84.9
Hund18885 Selenicereus undatus HOM05D000974 ORTHO05D006000 1.2e-209 733.4 470 77.2
HanXRQChr06g0176431 Helianthus annuus HOM05D000974 ORTHO05D006000 1.6e-209 733.0 519 73.2
Lj5g0022297 Lotus japonicus HOM05D000974 ORTHO05D006000 2.7e-209 732.3 525 71.4
AL1G20430 Arabidopsis lyrata HOM05D000974 ORTHO05D006000 1.3e-208 729.9 444 80.9
Gorai.002G218200 Gossypium raimondii HOM05D000974 ORTHO05D006000 2.9e-208 728.8 482 75.9
Carub.0001s0921 Capsella rubella HOM05D000974 ORTHO05D006000 1.1e-207 726.9 444 80.6
MD08G1243400 Malus domestica HOM05D000974 ORTHO05D006000 1.9e-207 726.1 425 83.5
arahy.Tifrunner.gnm1.ann1.0Q8MRK Arachis hypogaea HOM05D000974 ORTHO05D006000 2.5e-207 725.7 525 70.7
arahy.Tifrunner.gnm1.ann1.DWF5LU Arachis hypogaea HOM05D000974 ORTHO05D006000 2.5e-207 725.7 525 70.7
Sc17g0003920 Simmondsia chinensis HOM05D000974 ORTHO05D006000 2.5e-207 725.7 436 81.2
CiPaw.06G174600 Carya illinoinensis HOM05D000974 ORTHO05D006000 3.2e-207 725.3 425 83.1
Lalb_Chr21g0311651 Lupinus albus HOM05D000974 ORTHO05D006000 4.2e-207 724.9 424 82.8
EL10Ac7g16076 Beta vulgaris HOM05D000974 ORTHO05D006000 1.2e-206 723.4 455 78.5
MD15G1437700 Malus domestica HOM05D000974 ORTHO05D006000 1.2e-206 723.4 570 68.1
SalBow8G2098 Salvia bowleyana HOM05D000974 ORTHO05D006000 8.0e-206 720.7 422 83.2
A06p06550 Brassica napus HOM05D000974 ORTHO05D006000 3.0e-205 718.8 443 80.4
AT1G09830 Arabidopsis thaliana HOM05D000974 ORTHO05D006000 8.8e-205 717.2 449 79.3
SalBow4G1817 Salvia bowleyana HOM05D000974 ORTHO05D006000 2.0e-204 716.1 422 82.9
BcaB03g13541 Brassica carinata HOM05D000974 ORTHO05D006000 5.7e-204 714.5 505 72.7
BcaC07g38528 Brassica carinata HOM05D000974 ORTHO05D006000 2.2e-203 712.6 461 76.4
Aa31LG1G5090 Aethionema arabicum HOM05D000974 ORTHO05D006000 1.8e-202 709.5 466 75.3
Sp1g08460 Schrenkiella parvula HOM05D000974 ORTHO05D006000 2.4e-202 709.1 422 82.2
ATR0598G043 Amborella trichopoda HOM05D000974 ORTHO05D006000 3.1e-202 708.8 438 77.6
Os08g0191200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D006000 1.2e-201 706.8 526 68.8
A08p34320 Brassica napus HOM05D000974 ORTHO05D006000 1.6e-201 706.4 505 71.1
CARHR009850 Cardamine hirsuta HOM05D000974 ORTHO05D006000 3.5e-201 705.3 518 70.1
Migut.N00845 Erythranthe guttata HOM05D000974 ORTHO05D006000 7.7e-201 704.1 467 76.7
Os12g0197100 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D006000 1.0e-200 703.7 509 69.9
SEGI_14806 Sequoiadendron giganteum HOM05D000974 ORTHO05D006000 1.5e-199 699.9 428 78.7
Aqoxy1G01816 Aquilegia oxysepala HOM05D000974 ORTHO05D006000 4.2e-199 698.4 427 79.9
BcaC05g24841 Brassica carinata HOM05D000974 ORTHO05D006000 5.5e-199 698.0 422 81.5
Thhalv10007333m.g Eutrema salsugineum HOM05D000974 ORTHO05D006000 9.5e-199 697.2 422 80.8
BolC8t48951H Brassica oleracea HOM05D000974 ORTHO05D006000 2.8e-198 695.7 435 78.6
C05p07940 Brassica napus HOM05D000974 ORTHO05D006000 3.6e-198 695.3 422 81.3
BolC5t29546H Brassica oleracea HOM05D000974 ORTHO05D006000 3.6e-198 695.3 422 81.3
HPP92_026669 Vanilla planifolia HOM05D000974 ORTHO05D006000 1.4e-197 693.3 485 70.1
BraA08t35343Z Brassica rapa HOM05D000974 ORTHO05D006000 3.0e-197 692.2 423 80.1
Zm00001eb294330 Zea mays HOM05D000974 ORTHO05D006000 4.0e-197 691.8 434 77.4
BraA06t23866Z Brassica rapa HOM05D000974 ORTHO05D006000 2.6e-196 689.1 422 80.3
PSO170G5315 Papaver somniferum HOM05D000974 ORTHO05D006000 1.7e-195 686.4 545 65.3
PSO782G2965 Papaver somniferum HOM05D000974 ORTHO05D006000 8.3e-195 684.1 545 64.8
SGA_v2.0_scaffold42G15899 Striga asiatica HOM05D000974 ORTHO05D006000 7.8e-193 677.6 572 64.0
Gohir.D01G176200 Gossypium hirsutum HOM05D000974 ORTHO05D006000 2.9e-192 675.6 482 71.8
FAN10G2816 Fragaria x ananassa HOM05D000974 ORTHO05D006000 8.6e-192 674.1 403 82.9
Pp3c19_9430 Physcomitrium patens HOM05D000974 ORTHO05D006000 1.5e-183 646.7 439 71.3
CDE02G0137 Ceratophyllum demersum HOM05D000974 ORTHO05D006000 1.6e-182 643.3 404 77.0
SMO358G0426 Selaginella moellendorffii HOM05D000974 ORTHO05D006000 4.7e-182 641.7 426 71.8
Pp3c22_7830 Physcomitrium patens HOM05D000974 ORTHO05D006000 2.3e-181 639.4 432 70.6
Mapoly0041s0149 Marchantia polymorpha HOM05D000974 ORTHO05D006000 2.6e-180 636.0 491 62.9
AagrBONN_evm.TU.Sc2ySwM_368.1734 Anthoceros agrestis HOM05D000974 ORTHO05D006000 8.1e-174 614.4 428 69.2
CDE04G1010 Ceratophyllum demersum HOM05D000974 ORTHO05D006000 2.1e-166 589.7 365 78.4
Nitab4.5_0003281g0060 Nicotiana tabacum HOM05D000974 ORTHO05D006000 3.2e-162 575.9 302 95.4
Oeu030849.1 Olea europaea HOM05D000974 ORTHO05D006000 4.2e-162 575.5 324 87.0
Nitab4.5_0003893g0040 Nicotiana tabacum HOM05D000974 ORTHO05D006000 5.3e-157 558.5 338 86.1
Gohir.A12G043800 Gossypium hirsutum HOM05D000974 ORTHO05D006000 2.3e-152 543.1 312 85.9
CBR_g36226 Chara braunii HOM05D000974 ORTHO05D006000 3.0e-144 516.2 432 60.0
C08p13210 Brassica napus HOM05D000974 ORTHO05D006000 1.9e-143 513.5 310 81.6
Eucgr.I02773 Eucalyptus grandis HOM05D000974 ORTHO05D006000 1.1e-141 507.7 326 76.4
unitig_8.g3587 Utricularia gibba HOM05D000974 ORTHO05D006000 1.8e-141 506.9 300 82.0
CSS0038090 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 2.0e-140 503.4 299 84.3
MCO16G439 Micromonas commoda HOM05D000974 ORTHO05D006000 2.6e-140 503.1 432 60.6
Cre18.g749497 Chlamydomonas reinhardtii HOM05D000974 ORTHO05D006000 7.6e-140 501.5 428 59.3
CSS0048615 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 8.4e-131 471.5 319 75.9
Zm00001eb342350 Zea mays HOM05D000974 ORTHO05D006000 3.0e-120 436.4 273 76.9
PRCOL_00005058 Prasinoderma coloniale HOM05D000974 ORTHO05D006000 1.1e-119 434.5 424 55.2
Pp3s32_121 Physcomitrium patens HOM05D000974 ORTHO05D006000 1.7e-107 394.0 432 46.5
arahy.Tifrunner.gnm1.ann1.FF9LB7 Arachis hypogaea HOM05D000974 ORTHO05D006000 2.3e-96 357.1 242 75.2
Cfa023437 Carpinus fangiana HOM05D000974 ORTHO05D006000 2.4e-93 347.1 435 43.7
Nitab4.5_0003893g0060 Nicotiana tabacum HOM05D000974 ORTHO05D006000 1.1e-90 338.2 176 91.5
Cfa022594 Carpinus fangiana HOM05D000974 ORTHO05D006000 4.7e-73 279.6 355 42.5
Nitab4.5_0001773g0060 Nicotiana tabacum HOM05D000974 ORTHO05D006000 3.5e-60 236.9 186 71.0
CSS0011192 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 1.4e-56 224.9 133 78.9
arahy.Tifrunner.gnm1.ann1.LT2KYF Arachis hypogaea HOM05D000974 ORTHO05D006000 6.8e-48 196.1 125 78.4
unitig_8.g3588 Utricularia gibba HOM05D000974 ORTHO05D006000 2.6e-47 194.1 120 74.2
Hund18887 Selenicereus undatus HOM05D000974 ORTHO05D006000 1.9e-45 188.0 173 61.8
Cre18.g749647 Chlamydomonas reinhardtii HOM05D000974 ORTHO05D006000 4.2e-45 186.8 180 53.3
CSS0022082 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 8.7e-43 179.1 131 66.4
Actinidia38994 Actinidia chinensis HOM05D000974 ORTHO05D006000 8.4e-38 162.5 144 56.9
A07p04420 Brassica napus HOM05D000974 ORTHO05D016809 4.5e-31 140.2 108 63.9
arahy.Tifrunner.gnm1.ann1.3IC4JN Arachis hypogaea HOM05D000974 ORTHO05D006000 5.8e-31 139.8 90 76.7
BraA07t28236Z Brassica rapa HOM05D000974 ORTHO05D016809 2.9e-30 137.5 106 64.2
BcaC04g19187 Brassica carinata HOM05D000974 ORTHO05D016809 2.7e-28 131.0 80 76.2
A06p28170 Brassica napus HOM05D000974 ORTHO05D016809 6.0e-28 129.8 80 76.2
BcaC01g01590 Brassica carinata HOM05D000974 ORTHO05D016809 1.0e-27 129.0 80 75.0
C03p74280 Brassica napus HOM05D000974 ORTHO05D016809 3.9e-27 127.1 80 73.8
Sabra03G0003100 Salix brachista HOM05D000974 ORTHO05D006000 1.1e-26 125.6 78 76.9
C08p14510 Brassica napus HOM05D000974 ORTHO05D016809 1.5e-26 125.2 77 75.3
Nitab4.5_0000787g0090 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.9e-26 124.8 276 37.0
BcaC01g02641 Brassica carinata HOM05D000974 ORTHO05D016809 1.3e-22 112.1 92 60.9
C03p62530 Brassica napus HOM05D000974 ORTHO05D016809 2.9e-22 110.9 120 53.3
BolC3t18510H Brassica oleracea HOM05D000974 ORTHO05D016809 2.9e-22 110.9 120 53.3
Haze_26160 Corylus avellana HOM05D003155 ORTHO05D004342 2.1e-20 104.8 258 31.4
Nitab4.5_0001773g0070 Nicotiana tabacum HOM05D000974 ORTHO05D285698 1.9e-18 98.2 67 70.1
arahy.Tifrunner.gnm1.ann1.G9FX3A Arachis hypogaea HOM05D000974 ORTHO05D083560 6.9e-16 89.7 53 81.1
BcaB03g13286 Brassica carinata HOM05D000974 ORTHO05D091645 8.5e-06 56.2 28 96.4


User provided reference genes

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